RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 NFIXQ14938 502 aa19.11■□□□□ 0.65
CCDC140-201ENST00000295226 SUSD4Q5VX71 490 aa19.11■□□□□ 0.65
CCDC140-201ENST00000295226 CWC25Q9NXE8 425 aaPredicted RBP19.11■□□□□ 0.65
CCDC140-201ENST00000295226 NBPF7P0C2Y1 421 aaPredicted RBP19.1■□□□□ 0.65
CCDC140-201ENST00000295226 CCDC191Q8NCU4 936 aa19.1■□□□□ 0.65
CCDC140-201ENST00000295226 C9orf78Q9NZ63 289 aaPredicted RBP19.1■□□□□ 0.65
CCDC140-201ENST00000295226 ANKRD36CQ5JPF3 1778 aa19.09■□□□□ 0.65
CCDC140-201ENST00000295226 TRIM28Q13263 835 aaKnown RBP19.09■□□□□ 0.65
CCDC140-201ENST00000295226 SETDB2Q96T68 719 aa19.09■□□□□ 0.65
CCDC140-201ENST00000295226 C1orf115Q9H7X2 142 aa19.09■□□□□ 0.65
CCDC140-201ENST00000295226 DDX19BQ9UMR2 479 aa19.09■□□□□ 0.65
CCDC140-201ENST00000295226 QSER1Q2KHR3 1735 aa19.08■□□□□ 0.65
CCDC140-201ENST00000295226 FAM89AQ96GI7 184 aa19.08■□□□□ 0.65
CCDC140-201ENST00000295226 N4BP2Q86UW6 1770 aaPredicted RBP19.08■□□□□ 0.64
CCDC140-201ENST00000295226 GRM8O00222 908 aa19.08■□□□□ 0.64
CCDC140-201ENST00000295226 UBE3BQ7Z3V4 1068 aa19.08■□□□□ 0.64
CCDC140-201ENST00000295226 CCDC24Q8N4L8 307 aa19.08■□□□□ 0.64
CCDC140-201ENST00000295226 TM4SF1P30408 202 aa19.07■□□□□ 0.64
CCDC140-201ENST00000295226 NUTM1Q86Y26 1132 aa19.07■□□□□ 0.64
CCDC140-201ENST00000295226 TRMT112Q9UI30 125 aaKnown RBP19.07■□□□□ 0.64
CCDC140-201ENST00000295226 RGL2O15211 777 aa19.06■□□□□ 0.64
CCDC140-201ENST00000295226 ZBTB7AO95365 584 aa19.06■□□□□ 0.64
CCDC140-201ENST00000295226 DDR1Q08345 913 aa19.06■□□□□ 0.64
CCDC140-201ENST00000295226 NLGN1Q8N2Q7 840 aa19.06■□□□□ 0.64
CCDC140-201ENST00000295226 ZBTB40Q9NUA8 1239 aa19.06■□□□□ 0.64
CCDC140-201ENST00000295226 H7C1W4 665 aa19.05■□□□□ 0.64
CCDC140-201ENST00000295226 PARP10Q53GL7 1025 aa19.05■□□□□ 0.64
CCDC140-201ENST00000295226 UTP14AQ9BVJ6 771 aaKnown RBP19.05■□□□□ 0.64
CCDC140-201ENST00000295226 NTSR2O95665 410 aa19.05■□□□□ 0.64
CCDC140-201ENST00000295226 MMP10P09238 476 aa19.05■□□□□ 0.64
CCDC140-201ENST00000295226 UBTFL1P0CB47 393 aaPredicted RBP19.05■□□□□ 0.64
CCDC140-201ENST00000295226 CASP7P55210 303 aa19.05■□□□□ 0.64
CCDC140-201ENST00000295226 SOCS7O14512 581 aa19.04■□□□□ 0.64
CCDC140-201ENST00000295226 PPP1R42Q7Z4L9 355 aa19.04■□□□□ 0.64
CCDC140-201ENST00000295226 NBPF5PQ86XG9 351 aaPredicted RBP19.04■□□□□ 0.64
CCDC140-201ENST00000295226 ZBTB38Q8NAP3 1195 aaPredicted RBP19.04■□□□□ 0.64
CCDC140-201ENST00000295226 SUCLG2Q96I99 432 aa19.04■□□□□ 0.64
CCDC140-201ENST00000295226 ATF5Q9Y2D1 282 aaPredicted RBP19.04■□□□□ 0.64
CCDC140-201ENST00000295226 LRRFIP2Q9Y608 721 aaKnown RBP19.04■□□□□ 0.64
CCDC140-201ENST00000295226 POLRMTO00411 1230 aaKnown RBP19.03■□□□□ 0.64
CCDC140-201ENST00000295226 SERPINB2P05120 415 aa19.03■□□□□ 0.64
CCDC140-201ENST00000295226 PCCAP05165 728 aaPredicted RBP19.03■□□□□ 0.64
CCDC140-201ENST00000295226 GNAI3P08754 354 aa19.03■□□□□ 0.64
CCDC140-201ENST00000295226 ERFEQ4G0M1 354 aa19.03■□□□□ 0.64
CCDC140-201ENST00000295226 UTYO14607 1347 aa19.02■□□□□ 0.64
CCDC140-201ENST00000295226 HCLS1P14317 486 aaPredicted RBP19.02■□□□□ 0.64
CCDC140-201ENST00000295226 EPHA10Q5JZY3 1008 aa19.02■□□□□ 0.64
CCDC140-201ENST00000295226 KAZALD1Q96I82 304 aa19.02■□□□□ 0.64
CCDC140-201ENST00000295226 CARMIL3Q8ND23 1372 aa19.02■□□□□ 0.63
CCDC140-201ENST00000295226 GTF2E1P29083 439 aaPredicted RBP19.01■□□□□ 0.63
CCDC140-201ENST00000295226 PPP4R2Q9NY27 417 aa19.01■□□□□ 0.63
CCDC140-201ENST00000295226 PCDHB15Q9Y5E8 787 aa19.01■□□□□ 0.63
CCDC140-201ENST00000295226 SH3TC1Q8TE82 1336 aa19.01■□□□□ 0.63
CCDC140-201ENST00000295226 IRS4O14654 1257 aaPredicted RBP19.01■□□□□ 0.63
CCDC140-201ENST00000295226 NPHP1O15259 732 aa19.01■□□□□ 0.63
CCDC140-201ENST00000295226 GNAI2P04899 355 aa19.01■□□□□ 0.63
CCDC140-201ENST00000295226 CASZ1Q86V15 1759 aa19■□□□□ 0.63
CCDC140-201ENST00000295226 TPTE2Q6XPS3 522 aa19■□□□□ 0.63
CCDC140-201ENST00000295226 SLC16A10Q8TF71 515 aa19■□□□□ 0.63
CCDC140-201ENST00000295226 COL24A1Q17RW2 1714 aa18.99■□□□□ 0.63
CCDC140-201ENST00000295226 PRR5LQ6MZQ0 368 aa18.99■□□□□ 0.63
CCDC140-201ENST00000295226 CCDC85AQ96PX6 553 aaPredicted RBP18.99■□□□□ 0.63
CCDC140-201ENST00000295226 NYXQ9GZU5 481 aa18.99■□□□□ 0.63
CCDC140-201ENST00000295226 BICC1Q9H694 974 aaKnown RBP18.99■□□□□ 0.63
CCDC140-201ENST00000295226 PARP3Q9Y6F1 533 aa18.99■□□□□ 0.63
CCDC140-201ENST00000295226 ABCC12Q96J65 1359 aa18.99■□□□□ 0.63
CCDC140-201ENST00000295226 CNBD1Q8NA66 436 aa18.98■□□□□ 0.63
CCDC140-201ENST00000295226 CHMP4BQ9H444 224 aaKnown RBP18.98■□□□□ 0.63
CCDC140-201ENST00000295226 IBTKQ9P2D0 1353 aaPredicted RBP18.98■□□□□ 0.63
CCDC140-201ENST00000295226 FOXO4P98177 505 aa18.98■□□□□ 0.63
CCDC140-201ENST00000295226 C3orf67Q6ZVT6 689 aa18.98■□□□□ 0.63
CCDC140-201ENST00000295226 ANKRD44Q8N8A2 993 aa18.97■□□□□ 0.63
CCDC140-201ENST00000295226 MTFR1LQ9H019 292 aa18.97■□□□□ 0.63
CCDC140-201ENST00000295226 CDHR2Q9BYE9 1310 aa18.96■□□□□ 0.63
CCDC140-201ENST00000295226 SIRT2Q8IXJ6 389 aa18.96■□□□□ 0.63
CCDC140-201ENST00000295226 CEP85Q6P2H3 762 aa18.95■□□□□ 0.62
CCDC140-201ENST00000295226 LMBR1LQ6UX01 489 aa18.95■□□□□ 0.62
CCDC140-201ENST00000295226 CHMP3Q9Y3E7 222 aa18.95■□□□□ 0.62
CCDC140-201ENST00000295226 PNMA6EA0A0J9YXQ4 647 aa18.95■□□□□ 0.62
CCDC140-201ENST00000295226 PDE8AO60658 829 aa18.95■□□□□ 0.62
CCDC140-201ENST00000295226 SLC10A5Q5PT55 438 aa18.94■□□□□ 0.62
CCDC140-201ENST00000295226 DDX60Q8IY21 1712 aaKnown RBP18.94■□□□□ 0.62
CCDC140-201ENST00000295226 CTSWP56202 376 aa18.93■□□□□ 0.62
CCDC140-201ENST00000295226 ST5P78524 1137 aa18.93■□□□□ 0.62
CCDC140-201ENST00000295226 TTLL11Q8NHH1 800 aa18.93■□□□□ 0.62
CCDC140-201ENST00000295226 PLA2G12BQ9BX93 195 aa18.93■□□□□ 0.62
CCDC140-201ENST00000295226 ATP8B2P98198 1209 aa18.92■□□□□ 0.62
CCDC140-201ENST00000295226 HDAC5Q9UQL6 1122 aa18.92■□□□□ 0.62
CCDC140-201ENST00000295226 SRGAP3O43295 1099 aa18.92■□□□□ 0.62
CCDC140-201ENST00000295226 IGHDP01880 384 aa18.92■□□□□ 0.62
CCDC140-201ENST00000295226 AAMPQ13685 434 aa18.92■□□□□ 0.62
CCDC140-201ENST00000295226 RABL6Q3YEC7 729 aaPredicted RBP18.92■□□□□ 0.62
CCDC140-201ENST00000295226 B4GALNT3Q6L9W6 998 aa18.92■□□□□ 0.62
CCDC140-201ENST00000295226 CSF1RP07333 972 aa18.91■□□□□ 0.62
CCDC140-201ENST00000295226 PTGER2P43116 358 aa18.91■□□□□ 0.62
CCDC140-201ENST00000295226 FAM161AQ3B820 660 aa18.91■□□□□ 0.62
CCDC140-201ENST00000295226 KLHDC4Q8TBB5 520 aa18.91■□□□□ 0.62
CCDC140-201ENST00000295226 NLRP3Q96P20 1036 aa18.91■□□□□ 0.62
CCDC140-201ENST00000295226 GREM2Q9H772 168 aa18.91■□□□□ 0.62
CCDC140-201ENST00000295226 TNRC6CQ9HCJ0 1690 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms