RNA–Protein interactions for RNA: ENST00000290417.6

GFRA4-201, Transcript of GDNF family receptor alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA4, Length 1,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA4-201ENST00000290417 SLC4A2P04920 1241 aa29.06■■■□□ 2.24
GFRA4-201ENST00000290417 STYK1Q6J9G0 422 aa29.06■■■□□ 2.24
GFRA4-201ENST00000290417 MASTLQ96GX5 879 aa29.06■■■□□ 2.24
GFRA4-201ENST00000290417 ATP5J2-PTCD1G3V325 749 aa29.05■■■□□ 2.24
GFRA4-201ENST00000290417 DDX58O95786 925 aaKnown RBP29.05■■■□□ 2.24
GFRA4-201ENST00000290417 ZNF428Q96B54 188 aa29.05■■■□□ 2.24
GFRA4-201ENST00000290417 KLRG2A4D1S0 409 aaPredicted RBP29.04■■■□□ 2.24
GFRA4-201ENST00000290417 E9PSI1 815 aa29.04■■■□□ 2.24
GFRA4-201ENST00000290417 NPR1P16066 1061 aa29.03■■■□□ 2.24
GFRA4-201ENST00000290417 CNKSR1Q969H4 720 aa29.03■■■□□ 2.24
GFRA4-201ENST00000290417 ISCA1Q9BUE6 129 aa29.03■■■□□ 2.24
GFRA4-201ENST00000290417 SLX4Q8IY92 1834 aa29.03■■■□□ 2.24
GFRA4-201ENST00000290417 G2E3Q7L622 706 aa29.03■■■□□ 2.24
GFRA4-201ENST00000290417 TRMT112Q9UI30 125 aaKnown RBP29.03■■■□□ 2.24
GFRA4-201ENST00000290417 RIC1Q4ADV7 1423 aa29.01■■■□□ 2.23
GFRA4-201ENST00000290417 SLFN5Q08AF3 891 aa29.01■■■□□ 2.23
GFRA4-201ENST00000290417 MYD88Q99836 296 aa29.01■■■□□ 2.23
GFRA4-201ENST00000290417 ZNF219Q9P2Y4 722 aaPredicted RBP29.01■■■□□ 2.23
GFRA4-201ENST00000290417 RNF123Q5XPI4 1314 aa29.01■■■□□ 2.23
GFRA4-201ENST00000290417 PRPF40BQ6NWY9 871 aaKnown RBP29■■■□□ 2.23
GFRA4-201ENST00000290417 CDCA7LQ96GN5 454 aa29■■■□□ 2.23
GFRA4-201ENST00000290417 MAP3K2Q9Y2U5 619 aa29■■■□□ 2.23
GFRA4-201ENST00000290417 SYNE4Q8N205 404 aa28.99■■■□□ 2.23
GFRA4-201ENST00000290417 PI4KAP2A4QPH2 592 aa28.98■■■□□ 2.23
GFRA4-201ENST00000290417 C21orf2O43822 256 aa28.98■■■□□ 2.23
GFRA4-201ENST00000290417 SLC10A5Q5PT55 438 aa28.98■■■□□ 2.23
GFRA4-201ENST00000290417 KSR2Q6VAB6 950 aa28.98■■■□□ 2.23
GFRA4-201ENST00000290417 PI4KAP1Q8N8J0 262 aa28.98■■■□□ 2.23
GFRA4-201ENST00000290417 METTL22Q9BUU2 404 aaPredicted RBP28.98■■■□□ 2.23
GFRA4-201ENST00000290417 SH3TC1Q8TE82 1336 aa28.98■■■□□ 2.23
GFRA4-201ENST00000290417 LAMB2P55268 1798 aa28.98■■■□□ 2.23
GFRA4-201ENST00000290417 FLIIQ13045 1269 aa28.97■■■□□ 2.23
GFRA4-201ENST00000290417 TRIM28Q13263 835 aaKnown RBP28.97■■■□□ 2.23
GFRA4-201ENST00000290417 CRY2Q49AN0 593 aa28.97■■■□□ 2.23
GFRA4-201ENST00000290417 RPGRQ92834 1020 aaKnown RBP28.97■■■□□ 2.23
GFRA4-201ENST00000290417 NLRP3Q96P20 1036 aa28.97■■■□□ 2.23
GFRA4-201ENST00000290417 ADCY9O60503 1353 aa28.96■■■□□ 2.23
GFRA4-201ENST00000290417 HCLS1P14317 486 aaPredicted RBP28.96■■■□□ 2.23
GFRA4-201ENST00000290417 C3orf67Q6ZVT6 689 aa28.96■■■□□ 2.23
GFRA4-201ENST00000290417 SBF1O95248 1867 aa28.95■■■□□ 2.23
GFRA4-201ENST00000290417 ALDH1B1P30837 517 aa28.95■■■□□ 2.23
GFRA4-201ENST00000290417 DDX60Q8IY21 1712 aaKnown RBP28.95■■■□□ 2.23
GFRA4-201ENST00000290417 FKBP5Q13451 457 aaPredicted RBP28.94■■■□□ 2.22
GFRA4-201ENST00000290417 FAM89AQ96GI7 184 aa28.94■■■□□ 2.22
GFRA4-201ENST00000290417 RASSF7Q02833 373 aa28.94■■■□□ 2.22
GFRA4-201ENST00000290417 RTL5Q5HYW3 569 aaPredicted RBP28.94■■■□□ 2.22
GFRA4-201ENST00000290417 ZNF784Q8NCA9 323 aaPredicted RBP28.94■■■□□ 2.22
GFRA4-201ENST00000290417 FER1L6Q2WGJ9 1857 aa28.93■■■□□ 2.22
GFRA4-201ENST00000290417 RBM17Q96I25 401 aaKnown RBP28.93■■■□□ 2.22
GFRA4-201ENST00000290417 CCDC88AQ3V6T2 1871 aa28.92■■■□□ 2.22
GFRA4-201ENST00000290417 NEXNQ0ZGT2 675 aa28.92■■■□□ 2.22
GFRA4-201ENST00000290417 CCDC191Q8NCU4 936 aa28.92■■■□□ 2.22
GFRA4-201ENST00000290417 HOXA10P31260 410 aaPredicted RBP28.91■■■□□ 2.22
GFRA4-201ENST00000290417 HNRNPUQ00839 825 aaKnown RBP eCLIP28.91■■■□□ 2.22
GFRA4-201ENST00000290417 CWC25Q9NXE8 425 aaPredicted RBP28.91■■■□□ 2.22
GFRA4-201ENST00000290417 C9orf131Q5VYM1 1079 aa28.9■■■□□ 2.22
GFRA4-201ENST00000290417 TRMT2AQ8IZ69 625 aaKnown RBP28.9■■■□□ 2.22
GFRA4-201ENST00000290417 IGKV5-2P06315 115 aa28.89■■■□□ 2.22
GFRA4-201ENST00000290417 SOGA3Q5TF21 947 aa28.89■■■□□ 2.22
GFRA4-201ENST00000290417 ZBTB38Q8NAP3 1195 aaPredicted RBP28.89■■■□□ 2.22
GFRA4-201ENST00000290417 RNF181Q9P0P0 153 aa28.89■■■□□ 2.22
GFRA4-201ENST00000290417 NFKBIEO00221 500 aa28.88■■■□□ 2.21
GFRA4-201ENST00000290417 C7orf43Q8WVR3 580 aa28.88■■■□□ 2.21
GFRA4-201ENST00000290417 CRAMP1Q96RY5 1269 aa28.88■■■□□ 2.21
GFRA4-201ENST00000290417 IRS4O14654 1257 aaPredicted RBP28.87■■■□□ 2.21
GFRA4-201ENST00000290417 CWF19L2Q2TBE0 894 aaKnown RBP28.87■■■□□ 2.21
GFRA4-201ENST00000290417 DNAAF4Q8WXU2 420 aa28.87■■■□□ 2.21
GFRA4-201ENST00000290417 OLFM4Q6UX06 510 aa28.86■■■□□ 2.21
GFRA4-201ENST00000290417 JARID2Q92833 1246 aaPredicted RBP28.86■■■□□ 2.21
GFRA4-201ENST00000290417 PCCAP05165 728 aaPredicted RBP28.86■■■□□ 2.21
GFRA4-201ENST00000290417 LMNB1P20700 586 aa28.86■■■□□ 2.21
GFRA4-201ENST00000290417 CCDC93Q567U6 631 aa28.86■■■□□ 2.21
GFRA4-201ENST00000290417 TAF1P21675 1872 aa28.85■■■□□ 2.21
GFRA4-201ENST00000290417 NEURL1BA8MQ27 555 aa28.85■■■□□ 2.21
GFRA4-201ENST00000290417 F6X3S4 739 aa28.84■■■□□ 2.21
GFRA4-201ENST00000290417 PRELPP51888 382 aa28.84■■■□□ 2.21
GFRA4-201ENST00000290417 TAOK3Q9H2K8 898 aa28.84■■■□□ 2.21
GFRA4-201ENST00000290417 ABCC4O15439 1325 aa28.83■■■□□ 2.21
GFRA4-201ENST00000290417 PPEF1O14829 653 aaPredicted RBP28.83■■■□□ 2.21
GFRA4-201ENST00000290417 DDX46Q7L014 1031 aaKnown RBP28.83■■■□□ 2.21
GFRA4-201ENST00000290417 HSP90B1P14625 803 aaKnown RBP28.82■■■□□ 2.2
GFRA4-201ENST00000290417 MRPL50Q8N5N7 158 aaKnown RBP28.82■■■□□ 2.2
GFRA4-201ENST00000290417 ZNF526Q8TF50 670 aaPredicted RBP28.82■■■□□ 2.2
GFRA4-201ENST00000290417 SSH1Q8WYL5 1049 aa28.81■■■□□ 2.2
GFRA4-201ENST00000290417 LTBP3Q9NS15 1303 aa28.81■■■□□ 2.2
GFRA4-201ENST00000290417 TIAM2Q8IVF5 1701 aa28.81■■■□□ 2.2
GFRA4-201ENST00000290417 DICER1Q9UPY3 1922 aaKnown RBP28.81■■■□□ 2.2
GFRA4-201ENST00000290417 SF3B3Q15393 1217 aaKnown RBP28.8■■■□□ 2.2
GFRA4-201ENST00000290417 RTKN2Q8IZC4 609 aa28.8■■■□□ 2.2
GFRA4-201ENST00000290417 LINS1Q8NG48 757 aa28.8■■■□□ 2.2
GFRA4-201ENST00000290417 BCL2L13Q9BXK5 485 aa28.8■■■□□ 2.2
GFRA4-201ENST00000290417 CDHR2Q9BYE9 1310 aa28.79■■■□□ 2.2
GFRA4-201ENST00000290417 CT47B1P0C2W7 299 aaPredicted RBP28.78■■■□□ 2.2
GFRA4-201ENST00000290417 GRAPQ13588 217 aa28.78■■■□□ 2.2
GFRA4-201ENST00000290417 GCKRQ14397 625 aa28.78■■■□□ 2.2
GFRA4-201ENST00000290417 SLC51AQ86UW1 340 aa28.78■■■□□ 2.2
GFRA4-201ENST00000290417 GRAPLQ8TC17 118 aaPredicted RBP28.78■■■□□ 2.2
GFRA4-201ENST00000290417 MYH3P11055 1940 aa28.78■■■□□ 2.2
GFRA4-201ENST00000290417 PDE8AO60658 829 aa28.77■■■□□ 2.2
GFRA4-201ENST00000290417 FKBP4Q02790 459 aaKnown RBP eCLIP28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms