RNA–Protein interactions for RNA: ENST00000288135.5

KIT-201, Transcript of KIT proto-oncogene receptor tyrosine kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KIT, Length 5,186 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIT-201ENST00000288135 LRRFIP1Q32MZ4 808 aaKnown RBP9.59□□□□□ -0.87
KIT-201ENST00000288135 BCL11BQ9C0K0 894 aaPredicted RBP9.59□□□□□ -0.87
KIT-201ENST00000288135 KIF24Q5T7B8 1368 aa9.59□□□□□ -0.87
KIT-201ENST00000288135 CPLX1O14810 134 aa9.59□□□□□ -0.87
KIT-201ENST00000288135 CEBPZQ03701 1054 aaKnown RBP9.59□□□□□ -0.87
KIT-201ENST00000288135 CCDC129Q6ZRS4 1044 aa9.59□□□□□ -0.87
KIT-201ENST00000288135 ESYT1Q9BSJ8 1104 aa9.59□□□□□ -0.87
KIT-201ENST00000288135 CYP46A1Q9Y6A2 500 aa9.59□□□□□ -0.87
KIT-201ENST00000288135 PTMAP06454 111 aaKnown RBP9.59□□□□□ -0.87
KIT-201ENST00000288135 TRIM44Q96DX7 344 aaPredicted RBP9.59□□□□□ -0.87
KIT-201ENST00000288135 DDX11Q96FC9 970 aa9.59□□□□□ -0.87
KIT-201ENST00000288135 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.59□□□□□ -0.87
KIT-201ENST00000288135 TLR7Q9NYK1 1049 aaKnown RBP9.59□□□□□ -0.87
KIT-201ENST00000288135 EPHA10Q5JZY3 1008 aa9.58□□□□□ -0.88
KIT-201ENST00000288135 SAMD1Q6SPF0 538 aaPredicted RBP9.58□□□□□ -0.88
KIT-201ENST00000288135 ZRSR1Q15695 479 aaKnown RBP9.58□□□□□ -0.88
KIT-201ENST00000288135 EAF2Q96CJ1 260 aaPredicted RBP9.58□□□□□ -0.88
KIT-201ENST00000288135 PUS3Q9BZE2 481 aaKnown RBP9.58□□□□□ -0.88
KIT-201ENST00000288135 KDRP35968 1356 aa9.58□□□□□ -0.88
KIT-201ENST00000288135 NMIQ13287 307 aaPredicted RBP9.58□□□□□ -0.88
KIT-201ENST00000288135 LRRC24Q50LG9 513 aa9.58□□□□□ -0.88
KIT-201ENST00000288135 FERMT3Q86UX7 667 aa9.58□□□□□ -0.88
KIT-201ENST00000288135 CCDC83Q8IWF9 413 aa9.58□□□□□ -0.88
KIT-201ENST00000288135 FAM227BQ96M60 508 aa9.58□□□□□ -0.88
KIT-201ENST00000288135 PDRG1Q9NUG6 133 aa9.58□□□□□ -0.88
KIT-201ENST00000288135 LOC102724428A0A0B4J2F2 783 aa9.58□□□□□ -0.88
KIT-201ENST00000288135 ITGA6P23229 1130 aa9.58□□□□□ -0.88
KIT-201ENST00000288135 SIK1P57059 783 aa9.58□□□□□ -0.88
KIT-201ENST00000288135 ATP2B3Q16720 1220 aa9.58□□□□□ -0.88
KIT-201ENST00000288135 BLOC1S2Q6QNY1 142 aa9.58□□□□□ -0.88
KIT-201ENST00000288135 EVI5LQ96CN4 794 aa9.58□□□□□ -0.88
KIT-201ENST00000288135 SETDB2Q96T68 719 aa9.58□□□□□ -0.88
KIT-201ENST00000288135 IGKV5-2P06315 115 aa9.57□□□□□ -0.88
KIT-201ENST00000288135 CHMLP26374 656 aa9.57□□□□□ -0.88
KIT-201ENST00000288135 PRPF40AO75400 957 aaKnown RBP9.57□□□□□ -0.88
KIT-201ENST00000288135 UTP14AQ9BVJ6 771 aaKnown RBP9.57□□□□□ -0.88
KIT-201ENST00000288135 CCDC87Q9NVE4 849 aa9.57□□□□□ -0.88
KIT-201ENST00000288135 MST1RQ04912 1400 aa9.57□□□□□ -0.88
KIT-201ENST00000288135 HIP1O00291 1037 aa9.57□□□□□ -0.88
KIT-201ENST00000288135 BRPF1P55201 1214 aaPredicted RBP9.57□□□□□ -0.88
KIT-201ENST00000288135 SSH3Q8TE77 659 aa9.57□□□□□ -0.88
KIT-201ENST00000288135 AKAP2Q9Y2D5 859 aa9.57□□□□□ -0.88
KIT-201ENST00000288135 GSE1Q14687 1217 aa9.57□□□□□ -0.88
KIT-201ENST00000288135 HLFQ16534 295 aa9.57□□□□□ -0.88
KIT-201ENST00000288135 CHST3Q7LGC8 479 aa9.57□□□□□ -0.88
KIT-201ENST00000288135 SSFA2P28290 1259 aa9.56□□□□□ -0.88
KIT-201ENST00000288135 PIBF1Q8WXW3 757 aa9.56□□□□□ -0.88
KIT-201ENST00000288135 ATG3Q9NT62 314 aa9.56□□□□□ -0.88
KIT-201ENST00000288135 RTCBQ9Y3I0 505 aaKnown RBP9.56□□□□□ -0.88
KIT-201ENST00000288135 A0A1B0GUL7 405 aa9.56□□□□□ -0.88
KIT-201ENST00000288135 NBPF26B4DH59 902 aa9.56□□□□□ -0.88
KIT-201ENST00000288135 FIBPO43427 364 aa9.56□□□□□ -0.88
KIT-201ENST00000288135 ATP2B1P20020 1258 aa9.56□□□□□ -0.88
KIT-201ENST00000288135 NBPF14Q5TI25 921 aa9.56□□□□□ -0.88
KIT-201ENST00000288135 NBPF10Q6P3W6 841 aaKnown RBP9.56□□□□□ -0.88
KIT-201ENST00000288135 CCDC82Q8N4S0 544 aa9.56□□□□□ -0.88
KIT-201ENST00000288135 NBPF15Q8N660 670 aa9.56□□□□□ -0.88
KIT-201ENST00000288135 ITSN1Q15811 1721 aa9.56□□□□□ -0.88
KIT-201ENST00000288135 MINDY4BA8MYZ0 360 aa9.56□□□□□ -0.88
KIT-201ENST00000288135 PSMA5P28066 241 aa9.56□□□□□ -0.88
KIT-201ENST00000288135 CRKLP46109 303 aaKnown RBP9.56□□□□□ -0.88
KIT-201ENST00000288135 TCIRG1Q13488 830 aa9.56□□□□□ -0.88
KIT-201ENST00000288135 NECAB1Q8N987 351 aa9.56□□□□□ -0.88
KIT-201ENST00000288135 SMARCC1Q92922 1105 aaPredicted RBP9.56□□□□□ -0.88
KIT-201ENST00000288135 AIDAQ96BJ3 306 aa9.56□□□□□ -0.88
KIT-201ENST00000288135 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.56□□□□□ -0.88
KIT-201ENST00000288135 SNAP23O00161 211 aa9.56□□□□□ -0.88
KIT-201ENST00000288135 QTRT2Q9H974 415 aaKnown RBP9.56□□□□□ -0.88
KIT-201ENST00000288135 TFCP2L1Q9NZI6 479 aa9.56□□□□□ -0.88
KIT-201ENST00000288135 TNNI3KQ59H18 835 aa9.55□□□□□ -0.88
KIT-201ENST00000288135 CCDC191Q8NCU4 936 aa9.55□□□□□ -0.88
KIT-201ENST00000288135 GDPD2Q9HCC8 539 aa9.55□□□□□ -0.88
KIT-201ENST00000288135 FPGT-TNNI3KV9GXZ4 949 aa9.55□□□□□ -0.88
KIT-201ENST00000288135 IL15P40933 162 aaPredicted RBP9.55□□□□□ -0.88
KIT-201ENST00000288135 TDO2P48775 406 aa9.55□□□□□ -0.88
KIT-201ENST00000288135 GOLGA6L3A6NEY3 463 aa9.55□□□□□ -0.88
KIT-201ENST00000288135 DDX11L8A8MPP1 907 aa9.55□□□□□ -0.88
KIT-201ENST00000288135 SF3B2Q13435 895 aaKnown RBP9.55□□□□□ -0.88
KIT-201ENST00000288135 NOL10Q9BSC4 688 aaKnown RBP9.55□□□□□ -0.88
KIT-201ENST00000288135 SOS2Q07890 1332 aaPredicted RBP9.55□□□□□ -0.88
KIT-201ENST00000288135 TRIM37O94972 964 aa9.55□□□□□ -0.88
KIT-201ENST00000288135 USP26Q9BXU7 913 aa9.55□□□□□ -0.88
KIT-201ENST00000288135 GNL3LQ9NVN8 582 aaKnown RBP9.55□□□□□ -0.88
KIT-201ENST00000288135 HEG1Q9ULI3 1381 aa9.55□□□□□ -0.88
KIT-201ENST00000288135 C6orf229H3BNL8 230 aa9.54□□□□□ -0.88
KIT-201ENST00000288135 EYA2O00167 538 aa9.54□□□□□ -0.88
KIT-201ENST00000288135 TRAK2O60296 914 aa9.54□□□□□ -0.88
KIT-201ENST00000288135 CCT2P78371 535 aaKnown RBP9.54□□□□□ -0.88
KIT-201ENST00000288135 SF3A1Q15459 793 aaKnown RBP9.54□□□□□ -0.88
KIT-201ENST00000288135 RBM8AQ9Y5S9 174 aaKnown RBP9.54□□□□□ -0.88
KIT-201ENST00000288135 SLC5A1P13866 664 aa9.54□□□□□ -0.88
KIT-201ENST00000288135 CCDC152Q4G0S7 254 aa9.54□□□□□ -0.88
KIT-201ENST00000288135 ZGPATQ8N5A5 531 aaKnown RBP9.54□□□□□ -0.88
KIT-201ENST00000288135 SEC62Q99442 399 aaKnown RBP9.54□□□□□ -0.88
KIT-201ENST00000288135 NUCB2P80303 420 aa9.54□□□□□ -0.88
KIT-201ENST00000288135 GUCY1B3Q02153 619 aa9.54□□□□□ -0.88
KIT-201ENST00000288135 SYNE3Q6ZMZ3 975 aa9.54□□□□□ -0.88
KIT-201ENST00000288135 SLFNL1Q499Z3 407 aa9.54□□□□□ -0.88
KIT-201ENST00000288135 CAVIN1Q6NZI2 390 aaKnown RBP9.54□□□□□ -0.88
KIT-201ENST00000288135 MIGA1Q8NAN2 632 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms