RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 MAP3K5Q99683 1374 aa14.69□□□□□ -0.06
SLC6A1-201ENST00000287766 KIF1BO60333 1816 aa14.69□□□□□ -0.06
SLC6A1-201ENST00000287766 KIAA0754O94854 1291 aa14.69□□□□□ -0.06
SLC6A1-201ENST00000287766 SERPINC1P01008 464 aa14.69□□□□□ -0.06
SLC6A1-201ENST00000287766 USP44Q9H0E7 712 aa14.69□□□□□ -0.06
SLC6A1-201ENST00000287766 TMEM63CQ9P1W3 806 aa14.69□□□□□ -0.06
SLC6A1-201ENST00000287766 KSR2Q6VAB6 950 aa14.69□□□□□ -0.06
SLC6A1-201ENST00000287766 ANKRD13DQ6ZTN6 518 aa14.69□□□□□ -0.06
SLC6A1-201ENST00000287766 ZFP91Q96JP5 570 aaPredicted RBP14.69□□□□□ -0.06
SLC6A1-201ENST00000287766 FAM193AP78312 1265 aa14.69□□□□□ -0.06
SLC6A1-201ENST00000287766 PTPN14Q15678 1187 aa14.69□□□□□ -0.06
SLC6A1-201ENST00000287766 PRR36Q9H6K5 1346 aa14.68□□□□□ -0.06
SLC6A1-201ENST00000287766 KIF6Q6ZMV9 814 aa14.68□□□□□ -0.06
SLC6A1-201ENST00000287766 CHST3Q7LGC8 479 aa14.68□□□□□ -0.06
SLC6A1-201ENST00000287766 MAP3K4Q9Y6R4 1608 aa14.68□□□□□ -0.06
SLC6A1-201ENST00000287766 CFAP45Q9UL16 551 aa14.68□□□□□ -0.06
SLC6A1-201ENST00000287766 F13A1P00488 732 aa14.68□□□□□ -0.06
SLC6A1-201ENST00000287766 GPTP24298 496 aa14.68□□□□□ -0.06
SLC6A1-201ENST00000287766 SAFBQ15424 915 aaKnown RBP eCLIP14.68□□□□□ -0.06
SLC6A1-201ENST00000287766 NBPF6Q5VWK0 638 aa14.68□□□□□ -0.06
SLC6A1-201ENST00000287766 NBPF4Q96M43 638 aa14.68□□□□□ -0.06
SLC6A1-201ENST00000287766 E9PCH4 1651 aa14.68□□□□□ -0.06
SLC6A1-201ENST00000287766 ERICH2A1L162 156 aa14.67□□□□□ -0.06
SLC6A1-201ENST00000287766 SCAND2PQ9GZW5 306 aaPredicted RBP14.67□□□□□ -0.06
SLC6A1-201ENST00000287766 TBC1D2BQ9UPU7 963 aa14.67□□□□□ -0.06
SLC6A1-201ENST00000287766 TNNT1P13805 278 aa14.67□□□□□ -0.06
SLC6A1-201ENST00000287766 FAM227BQ96M60 508 aa14.67□□□□□ -0.06
SLC6A1-201ENST00000287766 ZNF853P0CG23 659 aa14.67□□□□□ -0.06
SLC6A1-201ENST00000287766 BICC1Q9H694 974 aaKnown RBP14.67□□□□□ -0.06
SLC6A1-201ENST00000287766 TRMT1Q9NXH9 659 aaKnown RBP14.67□□□□□ -0.06
SLC6A1-201ENST00000287766 BIN1O00499 593 aa14.67□□□□□ -0.06
SLC6A1-201ENST00000287766 ISM2Q6H9L7 571 aa14.67□□□□□ -0.06
SLC6A1-201ENST00000287766 NEK1Q96PY6 1258 aa14.67□□□□□ -0.06
SLC6A1-201ENST00000287766 GCP02774 474 aa14.66□□□□□ -0.06
SLC6A1-201ENST00000287766 LMBR1LQ6UX01 489 aa14.66□□□□□ -0.06
SLC6A1-201ENST00000287766 TET3O43151 1660 aa14.66□□□□□ -0.06
SLC6A1-201ENST00000287766 AKAP4Q5JQC9 854 aa14.66□□□□□ -0.06
SLC6A1-201ENST00000287766 EDC3Q96F86 508 aaKnown RBP14.66□□□□□ -0.06
SLC6A1-201ENST00000287766 DACT1Q9NYF0 836 aa14.66□□□□□ -0.06
SLC6A1-201ENST00000287766 SNX14Q9Y5W7 946 aa14.66□□□□□ -0.06
SLC6A1-201ENST00000287766 EIF3JO75822 258 aaKnown RBP14.66□□□□□ -0.06
SLC6A1-201ENST00000287766 POLR3DP05423 398 aaPredicted RBP14.66□□□□□ -0.06
SLC6A1-201ENST00000287766 C17orf53Q8N3J3 647 aaPredicted RBP14.66□□□□□ -0.06
SLC6A1-201ENST00000287766 ORAI2Q96SN7 254 aa14.66□□□□□ -0.06
SLC6A1-201ENST00000287766 NUP133Q8WUM0 1156 aa14.65□□□□□ -0.06
SLC6A1-201ENST00000287766 CCP110O43303 1012 aa14.65□□□□□ -0.06
SLC6A1-201ENST00000287766 USP8P40818 1118 aa14.65□□□□□ -0.06
SLC6A1-201ENST00000287766 ZKSCAN5Q9Y2L8 839 aa14.65□□□□□ -0.06
SLC6A1-201ENST00000287766 DHX16O60231 1041 aaKnown RBP14.65□□□□□ -0.06
SLC6A1-201ENST00000287766 METTL24Q5JXM2 366 aa14.65□□□□□ -0.06
SLC6A1-201ENST00000287766 VPS53Q5VIR6 699 aa14.65□□□□□ -0.06
SLC6A1-201ENST00000287766 CREB3L3Q68CJ9 461 aa14.65□□□□□ -0.06
SLC6A1-201ENST00000287766 ERLIN1O75477 346 aa14.65□□□□□ -0.06
SLC6A1-201ENST00000287766 CCDC144CPQ8IYA2 1237 aa14.65□□□□□ -0.06
SLC6A1-201ENST00000287766 LINS1Q8NG48 757 aa14.65□□□□□ -0.06
SLC6A1-201ENST00000287766 PIBF1Q8WXW3 757 aa14.65□□□□□ -0.06
SLC6A1-201ENST00000287766 EFCAB6Q5THR3 1501 aa14.65□□□□□ -0.06
SLC6A1-201ENST00000287766 ZNF165P49910 485 aa14.64□□□□□ -0.07
SLC6A1-201ENST00000287766 CCDC129Q6ZRS4 1044 aa14.64□□□□□ -0.07
SLC6A1-201ENST00000287766 POLR1AO95602 1720 aaPredicted RBP14.64□□□□□ -0.07
SLC6A1-201ENST00000287766 KIF18AQ8NI77 898 aa14.64□□□□□ -0.07
SLC6A1-201ENST00000287766 TIGD1Q96MW7 591 aa14.64□□□□□ -0.07
SLC6A1-201ENST00000287766 U3KPZ7 1027 aaPredicted RBP14.64□□□□□ -0.07
SLC6A1-201ENST00000287766 SGSM2O43147 1006 aa14.64□□□□□ -0.07
SLC6A1-201ENST00000287766 URI1O94763 535 aaPredicted RBP14.64□□□□□ -0.07
SLC6A1-201ENST00000287766 FBXO3Q9UK99 471 aa14.64□□□□□ -0.07
SLC6A1-201ENST00000287766 SPHKAPQ2M3C7 1700 aa14.64□□□□□ -0.07
SLC6A1-201ENST00000287766 SBNO1A3KN83 1393 aa14.63□□□□□ -0.07
SLC6A1-201ENST00000287766 FSD2A1L4K1 749 aa14.63□□□□□ -0.07
SLC6A1-201ENST00000287766 GPT2Q8TD30 523 aa14.63□□□□□ -0.07
SLC6A1-201ENST00000287766 ABCA6Q8N139 1617 aa14.63□□□□□ -0.07
SLC6A1-201ENST00000287766 PLEKHG3A1L390 1219 aa14.63□□□□□ -0.07
SLC6A1-201ENST00000287766 RAD21O60216 631 aa14.63□□□□□ -0.07
SLC6A1-201ENST00000287766 Q6ZUG5 572 aa14.63□□□□□ -0.07
SLC6A1-201ENST00000287766 CEP57L1Q8IYX8 460 aa14.63□□□□□ -0.07
SLC6A1-201ENST00000287766 IFNL2Q8IZJ0 200 aa14.63□□□□□ -0.07
SLC6A1-201ENST00000287766 INTS4Q96HW7 963 aaKnown RBP14.63□□□□□ -0.07
SLC6A1-201ENST00000287766 RNMTO43148 476 aaKnown RBP14.62□□□□□ -0.07
SLC6A1-201ENST00000287766 OFD1O75665 1012 aa14.62□□□□□ -0.07
SLC6A1-201ENST00000287766 IMMTQ16891 758 aaKnown RBP14.62□□□□□ -0.07
SLC6A1-201ENST00000287766 FSIP1Q8NA03 581 aa14.62□□□□□ -0.07
SLC6A1-201ENST00000287766 IP6K1Q92551 441 aa14.62□□□□□ -0.07
SLC6A1-201ENST00000287766 CLIP2Q9UDT6 1046 aa14.62□□□□□ -0.07
SLC6A1-201ENST00000287766 ALDH1L1O75891 902 aa14.62□□□□□ -0.07
SLC6A1-201ENST00000287766 TFCP2Q12800 502 aa14.62□□□□□ -0.07
SLC6A1-201ENST00000287766 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.62□□□□□ -0.07
SLC6A1-201ENST00000287766 SNRPA1P09661 255 aaKnown RBP14.62□□□□□ -0.07
SLC6A1-201ENST00000287766 ANO6Q4KMQ2 910 aa14.62□□□□□ -0.07
SLC6A1-201ENST00000287766 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.62□□□□□ -0.07
SLC6A1-201ENST00000287766 SHROOM2Q13796 1616 aa14.61□□□□□ -0.07
SLC6A1-201ENST00000287766 RNF17Q9BXT8 1623 aaKnown RBP14.61□□□□□ -0.07
SLC6A1-201ENST00000287766 C8orf76Q96K31 380 aa14.61□□□□□ -0.07
SLC6A1-201ENST00000287766 DDX17Q92841 729 aaKnown RBP14.61□□□□□ -0.07
SLC6A1-201ENST00000287766 MPHOSPH8Q99549 860 aa14.61□□□□□ -0.07
SLC6A1-201ENST00000287766 DNAJC25Q9H1X3 360 aa14.61□□□□□ -0.07
SLC6A1-201ENST00000287766 ROBO2Q9HCK4 1378 aa14.61□□□□□ -0.07
SLC6A1-201ENST00000287766 TIMM10P62072 90 aa14.61□□□□□ -0.07
SLC6A1-201ENST00000287766 GIMAP7Q8NHV1 300 aa14.61□□□□□ -0.07
SLC6A1-201ENST00000287766 SUCLG2Q96I99 432 aa14.61□□□□□ -0.07
SLC6A1-201ENST00000287766 TBX22Q9Y458 520 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms