RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 PODXL2Q9NZ53 605 aa15.79■□□□□ 0.12
SCAF4-201ENST00000286835 MAPK8IP2Q13387 824 aaPredicted RBP15.79■□□□□ 0.12
SCAF4-201ENST00000286835 ANKRD1Q15327 319 aa15.79■□□□□ 0.12
SCAF4-201ENST00000286835 CCAR2Q8N163 923 aaKnown RBP15.79■□□□□ 0.12
SCAF4-201ENST00000286835 IL17REQ8NFR9 667 aa15.79■□□□□ 0.12
SCAF4-201ENST00000286835 EVI5LQ96CN4 794 aa15.79■□□□□ 0.12
SCAF4-201ENST00000286835 ADAMTS2O95450 1211 aa15.78■□□□□ 0.12
SCAF4-201ENST00000286835 MEX3CQ5U5Q3 659 aaKnown RBP15.78■□□□□ 0.12
SCAF4-201ENST00000286835 ERCC4Q92889 916 aaPredicted RBP15.78■□□□□ 0.12
SCAF4-201ENST00000286835 LSG1Q9H089 658 aaKnown RBP15.78■□□□□ 0.12
SCAF4-201ENST00000286835 HECW2Q9P2P5 1572 aa15.78■□□□□ 0.12
SCAF4-201ENST00000286835 CBX8Q9HC52 389 aa15.78■□□□□ 0.12
SCAF4-201ENST00000286835 CGNQ9P2M7 1197 aaKnown RBP15.78■□□□□ 0.12
SCAF4-201ENST00000286835 PTPN14Q15678 1187 aa15.78■□□□□ 0.12
SCAF4-201ENST00000286835 VPS53Q5VIR6 699 aa15.78■□□□□ 0.12
SCAF4-201ENST00000286835 FAM177A1Q8N128 213 aaPredicted RBP15.78■□□□□ 0.12
SCAF4-201ENST00000286835 EDC3Q96F86 508 aaKnown RBP15.78■□□□□ 0.12
SCAF4-201ENST00000286835 HYPKQ9NX55 129 aa15.78■□□□□ 0.12
SCAF4-201ENST00000286835 A0A087WWV3 80 aa15.77■□□□□ 0.12
SCAF4-201ENST00000286835 KCNQ3O43525 872 aa15.77■□□□□ 0.12
SCAF4-201ENST00000286835 SSH3Q8TE77 659 aa15.77■□□□□ 0.12
SCAF4-201ENST00000286835 LGR6Q9HBX8 967 aa15.77■□□□□ 0.12
SCAF4-201ENST00000286835 STAP2Q9UGK3 403 aa15.77■□□□□ 0.12
SCAF4-201ENST00000286835 HIP1O00291 1037 aa15.77■□□□□ 0.12
SCAF4-201ENST00000286835 PTPRMP28827 1452 aa15.77■□□□□ 0.12
SCAF4-201ENST00000286835 BRF1Q92994 677 aa15.77■□□□□ 0.11
SCAF4-201ENST00000286835 TPCN1Q9ULQ1 816 aa15.77■□□□□ 0.11
SCAF4-201ENST00000286835 ZC3H13Q5T200 1668 aaKnown RBP15.77■□□□□ 0.11
SCAF4-201ENST00000286835 CD163L1Q9NR16 1453 aa15.76■□□□□ 0.11
SCAF4-201ENST00000286835 BIN1O00499 593 aa15.76■□□□□ 0.11
SCAF4-201ENST00000286835 PIP4K2AP48426 406 aaPredicted RBP15.76■□□□□ 0.11
SCAF4-201ENST00000286835 ISM2Q6H9L7 571 aa15.76■□□□□ 0.11
SCAF4-201ENST00000286835 DDX19AQ9NUU7 478 aaKnown RBP15.76■□□□□ 0.11
SCAF4-201ENST00000286835 VWDEQ8N2E2 1590 aa15.76■□□□□ 0.11
SCAF4-201ENST00000286835 CCDC171Q6TFL3 1326 aa15.76■□□□□ 0.11
SCAF4-201ENST00000286835 TPM4P67936 248 aa15.76■□□□□ 0.11
SCAF4-201ENST00000286835 STK11IPQ8N1F8 1099 aa15.76■□□□□ 0.11
SCAF4-201ENST00000286835 AATKQ6ZMQ8 1374 aa15.76■□□□□ 0.11
SCAF4-201ENST00000286835 JAK2O60674 1132 aa15.76■□□□□ 0.11
SCAF4-201ENST00000286835 CABP4P57796 275 aa15.76■□□□□ 0.11
SCAF4-201ENST00000286835 C19orf44Q9H6X5 657 aa15.76■□□□□ 0.11
SCAF4-201ENST00000286835 DEPDC5O75140 1603 aa15.75■□□□□ 0.11
SCAF4-201ENST00000286835 PTCD1O75127 700 aaKnown RBP15.75■□□□□ 0.11
SCAF4-201ENST00000286835 ATP2B3Q16720 1220 aa15.75■□□□□ 0.11
SCAF4-201ENST00000286835 CEP135Q66GS9 1140 aa15.75■□□□□ 0.11
SCAF4-201ENST00000286835 KIAA1524Q8TCG1 905 aa15.75■□□□□ 0.11
SCAF4-201ENST00000286835 DDX17Q92841 729 aaKnown RBP15.75■□□□□ 0.11
SCAF4-201ENST00000286835 LRRC59Q96AG4 307 aaKnown RBP15.75■□□□□ 0.11
SCAF4-201ENST00000286835 CDK12Q9NYV4 1490 aaPredicted RBP15.75■□□□□ 0.11
SCAF4-201ENST00000286835 RAB11FIP4Q86YS3 637 aa15.75■□□□□ 0.11
SCAF4-201ENST00000286835 CFAP45Q9UL16 551 aa15.75■□□□□ 0.11
SCAF4-201ENST00000286835 FLT4P35916 1363 aa15.74■□□□□ 0.11
SCAF4-201ENST00000286835 NAA30Q147X3 362 aaPredicted RBP15.74■□□□□ 0.11
SCAF4-201ENST00000286835 KIDINS220Q9ULH0 1771 aa15.74■□□□□ 0.11
SCAF4-201ENST00000286835 CPLX1O14810 134 aa15.74■□□□□ 0.11
SCAF4-201ENST00000286835 SKILP12757 684 aa15.74■□□□□ 0.11
SCAF4-201ENST00000286835 PI4K2BQ8TCG2 481 aa15.74■□□□□ 0.11
SCAF4-201ENST00000286835 CCAR1Q8IX12 1150 aaKnown RBP15.74■□□□□ 0.11
SCAF4-201ENST00000286835 TRERF1Q96PN7 1200 aa15.74■□□□□ 0.11
SCAF4-201ENST00000286835 DBF4Q9UBU7 674 aaPredicted RBP15.74■□□□□ 0.11
SCAF4-201ENST00000286835 NEXMIFQ5QGS0 1516 aa15.74■□□□□ 0.11
SCAF4-201ENST00000286835 ARAP3Q8WWN8 1544 aa15.74■□□□□ 0.11
SCAF4-201ENST00000286835 MROH1Q8NDA8 1641 aa15.74■□□□□ 0.11
SCAF4-201ENST00000286835 NR1I2O75469 434 aa15.73■□□□□ 0.11
SCAF4-201ENST00000286835 DDX46Q7L014 1031 aaKnown RBP15.73■□□□□ 0.11
SCAF4-201ENST00000286835 CHST3Q7LGC8 479 aa15.73■□□□□ 0.11
SCAF4-201ENST00000286835 USP16Q9Y5T5 823 aa15.73■□□□□ 0.11
SCAF4-201ENST00000286835 ARHGEF40Q8TER5 1519 aa15.73■□□□□ 0.11
SCAF4-201ENST00000286835 ATP7BP35670 1465 aa15.73■□□□□ 0.11
SCAF4-201ENST00000286835 STK38Q15208 465 aa15.73■□□□□ 0.11
SCAF4-201ENST00000286835 CCDC129Q6ZRS4 1044 aa15.73■□□□□ 0.11
SCAF4-201ENST00000286835 MYO3AQ8NEV4 1616 aa15.73■□□□□ 0.11
SCAF4-201ENST00000286835 SLC27A2O14975 620 aa15.73■□□□□ 0.11
SCAF4-201ENST00000286835 ZBTB9Q96C00 473 aa15.73■□□□□ 0.11
SCAF4-201ENST00000286835 NPHP3Q7Z494 1330 aa15.72■□□□□ 0.11
SCAF4-201ENST00000286835 ANKRD24Q8TF21 1146 aa15.72■□□□□ 0.11
SCAF4-201ENST00000286835 CPSF1Q10570 1443 aaKnown RBP15.72■□□□□ 0.11
SCAF4-201ENST00000286835 Q6ZUG5 572 aa15.72■□□□□ 0.11
SCAF4-201ENST00000286835 KAT6BQ8WYB5 2073 aa15.72■□□□□ 0.11
SCAF4-201ENST00000286835 WASHC4Q2M389 1173 aa15.72■□□□□ 0.11
SCAF4-201ENST00000286835 CEP57L1Q8IYX8 460 aa15.72■□□□□ 0.11
SCAF4-201ENST00000286835 FSIP1Q8NA03 581 aa15.72■□□□□ 0.11
SCAF4-201ENST00000286835 LEO1Q8WVC0 666 aaPredicted RBP15.72■□□□□ 0.11
SCAF4-201ENST00000286835 NEK1Q96PY6 1258 aa15.72■□□□□ 0.11
SCAF4-201ENST00000286835 SSH2Q76I76 1423 aa15.72■□□□□ 0.11
SCAF4-201ENST00000286835 RPAP1Q9BWH6 1393 aaPredicted RBP15.72■□□□□ 0.11
SCAF4-201ENST00000286835 MAP2P11137 1827 aaKnown RBP15.72■□□□□ 0.11
SCAF4-201ENST00000286835 MRVI1Q9Y6F6 885 aa15.72■□□□□ 0.11
SCAF4-201ENST00000286835 PPLO60437 1756 aa15.72■□□□□ 0.11
SCAF4-201ENST00000286835 TTC21AQ8NDW8 1320 aa15.71■□□□□ 0.11
SCAF4-201ENST00000286835 CREBRFQ8IUR6 639 aa15.71■□□□□ 0.11
SCAF4-201ENST00000286835 MYD88Q99836 296 aa15.71■□□□□ 0.11
SCAF4-201ENST00000286835 NAT10Q9H0A0 1025 aaKnown RBP15.71■□□□□ 0.11
SCAF4-201ENST00000286835 TTC41PQ6P2S7 1318 aa15.71■□□□□ 0.11
SCAF4-201ENST00000286835 ZNF75DP51815 510 aa15.71■□□□□ 0.11
SCAF4-201ENST00000286835 SYNE3Q6ZMZ3 975 aa15.71■□□□□ 0.11
SCAF4-201ENST00000286835 A0A0D9SFI3 127 aa15.71■□□□□ 0.1
SCAF4-201ENST00000286835 HOXC9P31274 260 aa15.71■□□□□ 0.1
SCAF4-201ENST00000286835 ZNF710Q8N1W2 664 aa15.71■□□□□ 0.1
SCAF4-201ENST00000286835 MNS1Q8NEH6 495 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 215.7 ms