RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 MSL1Q68DK7 614 aa22.44■■□□□ 1.18
LSM11-201ENST00000286307 TSPY26PQ9H489 355 aa22.44■■□□□ 1.18
LSM11-201ENST00000286307 TSPOAP1O95153 1857 aa22.44■■□□□ 1.18
LSM11-201ENST00000286307 CKAP2LQ8IYA6 745 aa22.44■■□□□ 1.18
LSM11-201ENST00000286307 RPRD2Q5VT52 1461 aaKnown RBP22.43■■□□□ 1.18
LSM11-201ENST00000286307 MYO6Q9UM54 1294 aa22.43■■□□□ 1.18
LSM11-201ENST00000286307 HMGB1P09429 215 aaKnown RBP22.43■■□□□ 1.18
LSM11-201ENST00000286307 MBD3O95983 291 aa22.43■■□□□ 1.18
LSM11-201ENST00000286307 C8orf76Q96K31 380 aa22.43■■□□□ 1.18
LSM11-201ENST00000286307 TSHZ3Q63HK5 1081 aa22.42■■□□□ 1.18
LSM11-201ENST00000286307 GRM8O00222 908 aa22.42■■□□□ 1.18
LSM11-201ENST00000286307 EIF6P56537 245 aaKnown RBP22.42■■□□□ 1.18
LSM11-201ENST00000286307 EYA1Q99502 592 aa22.42■■□□□ 1.18
LSM11-201ENST00000286307 UPF3BQ9BZI7 483 aaKnown RBP22.42■■□□□ 1.18
LSM11-201ENST00000286307 TRIM27P14373 513 aa22.42■■□□□ 1.18
LSM11-201ENST00000286307 QTRT2Q9H974 415 aaKnown RBP22.42■■□□□ 1.18
LSM11-201ENST00000286307 RNMTO43148 476 aaKnown RBP22.42■■□□□ 1.18
LSM11-201ENST00000286307 CCDC12Q8WUD4 166 aaPredicted RBP22.42■■□□□ 1.18
LSM11-201ENST00000286307 KSR2Q6VAB6 950 aa22.41■■□□□ 1.18
LSM11-201ENST00000286307 LUC7LQ9NQ29 371 aaKnown RBP22.41■■□□□ 1.18
LSM11-201ENST00000286307 TNNI2P48788 182 aa22.41■■□□□ 1.18
LSM11-201ENST00000286307 EAPPQ56P03 285 aaPredicted RBP22.41■■□□□ 1.18
LSM11-201ENST00000286307 CCDC24Q8N4L8 307 aa22.41■■□□□ 1.18
LSM11-201ENST00000286307 CCDC87Q9NVE4 849 aa22.41■■□□□ 1.18
LSM11-201ENST00000286307 FERMT3Q86UX7 667 aa22.41■■□□□ 1.18
LSM11-201ENST00000286307 POLKQ9UBT6 870 aa22.4■■□□□ 1.18
LSM11-201ENST00000286307 POTEJP0CG39 1038 aa22.4■■□□□ 1.18
LSM11-201ENST00000286307 ANKRD2Q9GZV1 360 aa22.4■■□□□ 1.18
LSM11-201ENST00000286307 MAP3K5Q99683 1374 aa22.4■■□□□ 1.18
LSM11-201ENST00000286307 CCDC150Q8NCX0 1101 aa22.4■■□□□ 1.18
LSM11-201ENST00000286307 YTHDC2Q9H6S0 1430 aaKnown RBP22.4■■□□□ 1.18
LSM11-201ENST00000286307 UFL1O94874 794 aa22.4■■□□□ 1.18
LSM11-201ENST00000286307 LARP6Q9BRS8 491 aaKnown RBP22.4■■□□□ 1.18
LSM11-201ENST00000286307 MICU3Q86XE3 530 aa22.39■■□□□ 1.18
LSM11-201ENST00000286307 SPC24Q8NBT2 197 aa22.39■■□□□ 1.17
LSM11-201ENST00000286307 CDR1P51861 262 aa22.39■■□□□ 1.17
LSM11-201ENST00000286307 MAGEB6P1A0A0J9YX57 407 aa22.38■■□□□ 1.17
LSM11-201ENST00000286307 TSG101Q99816 390 aa22.38■■□□□ 1.17
LSM11-201ENST00000286307 CCDC181Q5TID7 509 aa22.38■■□□□ 1.17
LSM11-201ENST00000286307 LARGE2Q8N3Y3 721 aa22.38■■□□□ 1.17
LSM11-201ENST00000286307 VSIG10Q8N0Z9 540 aa22.38■■□□□ 1.17
LSM11-201ENST00000286307 CFAP65Q6ZU64 1925 aaKnown RBP22.37■■□□□ 1.17
LSM11-201ENST00000286307 EIF5P55010 431 aaKnown RBP22.37■■□□□ 1.17
LSM11-201ENST00000286307 ZFYVE16Q7Z3T8 1539 aa22.37■■□□□ 1.17
LSM11-201ENST00000286307 BCS1LQ9Y276 419 aa22.37■■□□□ 1.17
LSM11-201ENST00000286307 ARHGEF10O15013 1369 aa22.37■■□□□ 1.17
LSM11-201ENST00000286307 PRKG1Q13976 671 aa22.37■■□□□ 1.17
LSM11-201ENST00000286307 PPFIA3O75145 1194 aa22.36■■□□□ 1.17
LSM11-201ENST00000286307 CCDC192P0DO97 292 aa22.36■■□□□ 1.17
LSM11-201ENST00000286307 CEP170Q5SW79 1584 aa22.36■■□□□ 1.17
LSM11-201ENST00000286307 LDHBP07195 334 aaKnown RBP22.36■■□□□ 1.17
LSM11-201ENST00000286307 RXRBP28702 533 aa22.36■■□□□ 1.17
LSM11-201ENST00000286307 IFIT1BQ5T764 474 aaKnown RBP22.35■■□□□ 1.17
LSM11-201ENST00000286307 NCOA7Q8NI08 942 aa22.35■■□□□ 1.17
LSM11-201ENST00000286307 NFKBIBQ15653 356 aa22.35■■□□□ 1.17
LSM11-201ENST00000286307 PHAXQ9H814 394 aaKnown RBP22.35■■□□□ 1.17
LSM11-201ENST00000286307 MAP3K19Q56UN5 1328 aa22.35■■□□□ 1.17
LSM11-201ENST00000286307 CWF19L2Q2TBE0 894 aaKnown RBP22.35■■□□□ 1.17
LSM11-201ENST00000286307 IL15P40933 162 aaPredicted RBP22.35■■□□□ 1.17
LSM11-201ENST00000286307 PLCD3Q8N3E9 789 aa22.35■■□□□ 1.17
LSM11-201ENST00000286307 NASPP49321 788 aaPredicted RBP22.34■■□□□ 1.17
LSM11-201ENST00000286307 SLC9C2Q5TAH2 1124 aa22.34■■□□□ 1.17
LSM11-201ENST00000286307 MIGA1Q8NAN2 632 aa22.34■■□□□ 1.17
LSM11-201ENST00000286307 SLC26A6Q9BXS9 759 aa22.34■■□□□ 1.17
LSM11-201ENST00000286307 C20orf194Q5TEA3 1177 aa22.34■■□□□ 1.17
LSM11-201ENST00000286307 HCLS1P14317 486 aaPredicted RBP22.34■■□□□ 1.17
LSM11-201ENST00000286307 TTC16Q8NEE8 873 aa22.34■■□□□ 1.17
LSM11-201ENST00000286307 USP16Q9Y5T5 823 aa22.34■■□□□ 1.17
LSM11-201ENST00000286307 TRAK2O60296 914 aa22.34■■□□□ 1.17
LSM11-201ENST00000286307 KLHL10Q6JEL2 608 aa22.34■■□□□ 1.17
LSM11-201ENST00000286307 METAP2P50579 478 aaKnown RBP eCLIP22.34■■□□□ 1.17
LSM11-201ENST00000286307 BICD1Q96G01 975 aa22.34■■□□□ 1.17
LSM11-201ENST00000286307 C8orf58Q8NAV2 365 aa22.33■■□□□ 1.17
LSM11-201ENST00000286307 ATP7AQ04656 1500 aa22.33■■□□□ 1.17
LSM11-201ENST00000286307 PICK1Q9NRD5 415 aa22.33■■□□□ 1.17
LSM11-201ENST00000286307 MAP3K9P80192 1104 aa22.33■■□□□ 1.16
LSM11-201ENST00000286307 WTAPQ15007 396 aa22.33■■□□□ 1.16
LSM11-201ENST00000286307 PA2G4Q9UQ80 394 aaKnown RBP22.33■■□□□ 1.16
LSM11-201ENST00000286307 NEFHP12036 1026 aa22.33■■□□□ 1.16
LSM11-201ENST00000286307 DPP8Q6V1X1 898 aaPredicted RBP22.33■■□□□ 1.16
LSM11-201ENST00000286307 IARSP41252 1262 aaKnown RBP22.32■■□□□ 1.16
LSM11-201ENST00000286307 CCDC97Q96F63 343 aaPredicted RBP22.32■■□□□ 1.16
LSM11-201ENST00000286307 MCM9Q9NXL9 1143 aa22.32■■□□□ 1.16
LSM11-201ENST00000286307 PPP4R3BQ5MIZ7 849 aa22.32■■□□□ 1.16
LSM11-201ENST00000286307 MAGEB6Q8N7X4 407 aa22.32■■□□□ 1.16
LSM11-201ENST00000286307 CALML4Q96GE6 196 aa22.32■■□□□ 1.16
LSM11-201ENST00000286307 MEIS3Q99687 375 aa22.32■■□□□ 1.16
LSM11-201ENST00000286307 HEATR3Q7Z4Q2 680 aa22.32■■□□□ 1.16
LSM11-201ENST00000286307 SYCP3Q8IZU3 236 aa22.32■■□□□ 1.16
LSM11-201ENST00000286307 RHPN1Q8TCX5 695 aa22.32■■□□□ 1.16
LSM11-201ENST00000286307 TNNT3P45378 269 aaPredicted RBP22.31■■□□□ 1.16
LSM11-201ENST00000286307 ALDH1L1O75891 902 aa22.31■■□□□ 1.16
LSM11-201ENST00000286307 ZNF772Q68DY9 489 aaPredicted RBP22.31■■□□□ 1.16
LSM11-201ENST00000286307 ARHGAP27Q6ZUM4 889 aa22.31■■□□□ 1.16
LSM11-201ENST00000286307 ASXL1Q8IXJ9 1541 aa22.31■■□□□ 1.16
LSM11-201ENST00000286307 FAM89AQ96GI7 184 aa22.31■■□□□ 1.16
LSM11-201ENST00000286307 GGA1Q9UJY5 639 aa22.31■■□□□ 1.16
LSM11-201ENST00000286307 PLCG2P16885 1265 aa22.31■■□□□ 1.16
LSM11-201ENST00000286307 SAP30BPQ9UHR5 308 aaKnown RBP22.3■■□□□ 1.16
LSM11-201ENST00000286307 SMARCC2Q8TAQ2 1214 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms