RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 CEP128Q6ZU80 1094 aa9.96□□□□□ -0.81
NIPBL-201ENST00000282516 ERCC6LQ2NKX8 1250 aa9.96□□□□□ -0.81
NIPBL-201ENST00000282516 ESCO1Q5FWF5 840 aa9.96□□□□□ -0.81
NIPBL-201ENST00000282516 GSTA5Q7RTV2 222 aa9.96□□□□□ -0.81
NIPBL-201ENST00000282516 SRRTQ9BXP5 876 aaKnown RBP9.96□□□□□ -0.81
NIPBL-201ENST00000282516 TRIM7Q9C029 511 aa9.96□□□□□ -0.81
NIPBL-201ENST00000282516 RPGRIP1LQ68CZ1 1315 aa9.96□□□□□ -0.82
NIPBL-201ENST00000282516 KIF1BPQ96EK5 621 aa9.96□□□□□ -0.82
NIPBL-201ENST00000282516 ZHX1Q9UKY1 873 aaPredicted RBP9.96□□□□□ -0.82
NIPBL-201ENST00000282516 IFT74Q96LB3 600 aa9.96□□□□□ -0.82
NIPBL-201ENST00000282516 TUBB4AP04350 444 aa9.96□□□□□ -0.82
NIPBL-201ENST00000282516 KRT13P13646 458 aa9.96□□□□□ -0.82
NIPBL-201ENST00000282516 STMN1P16949 149 aa9.96□□□□□ -0.82
NIPBL-201ENST00000282516 PPP1R9BQ96SB3 815 aa9.96□□□□□ -0.82
NIPBL-201ENST00000282516 ABCF2Q9UG63 623 aa9.96□□□□□ -0.82
NIPBL-201ENST00000282516 CRCPO75575 148 aa9.96□□□□□ -0.82
NIPBL-201ENST00000282516 PPP2R1AP30153 589 aa9.96□□□□□ -0.82
NIPBL-201ENST00000282516 CYLC1P35663 651 aaPredicted RBP9.96□□□□□ -0.82
NIPBL-201ENST00000282516 ATRIPQ8WXE1 791 aa9.96□□□□□ -0.82
NIPBL-201ENST00000282516 TRIM47Q96LD4 638 aa9.96□□□□□ -0.82
NIPBL-201ENST00000282516 MINDY4BA8MYZ0 360 aa9.95□□□□□ -0.82
NIPBL-201ENST00000282516 RANBP6O60518 1105 aaKnown RBP9.95□□□□□ -0.82
NIPBL-201ENST00000282516 STARD3NLO95772 234 aa9.95□□□□□ -0.82
NIPBL-201ENST00000282516 TXNDC16Q9P2K2 825 aa9.95□□□□□ -0.82
NIPBL-201ENST00000282516 CTAGE15A4D2H0 777 aa9.95□□□□□ -0.82
NIPBL-201ENST00000282516 CTAGE8P0CG41 777 aa9.95□□□□□ -0.82
NIPBL-201ENST00000282516 PIP4K2BP78356 416 aa9.95□□□□□ -0.82
NIPBL-201ENST00000282516 CTAGE6Q86UF2 777 aa9.95□□□□□ -0.82
NIPBL-201ENST00000282516 CTAGE4Q8IX94 777 aa9.95□□□□□ -0.82
NIPBL-201ENST00000282516 CPLX3Q8WVH0 158 aa9.95□□□□□ -0.82
NIPBL-201ENST00000282516 EPSTI1Q96J88 318 aa9.95□□□□□ -0.82
NIPBL-201ENST00000282516 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.95□□□□□ -0.82
NIPBL-201ENST00000282516 TMX1Q9H3N1 280 aa9.95□□□□□ -0.82
NIPBL-201ENST00000282516 EBAG9O00559 213 aa9.95□□□□□ -0.82
NIPBL-201ENST00000282516 BMP15O95972 392 aa9.95□□□□□ -0.82
NIPBL-201ENST00000282516 WDR78Q5VTH9 848 aa9.95□□□□□ -0.82
NIPBL-201ENST00000282516 IMPG2Q9BZV3 1241 aa9.95□□□□□ -0.82
NIPBL-201ENST00000282516 GAS8O95995 478 aa9.95□□□□□ -0.82
NIPBL-201ENST00000282516 SAMM50Q9Y512 469 aa9.95□□□□□ -0.82
NIPBL-201ENST00000282516 CKAP2LQ8IYA6 745 aa9.95□□□□□ -0.82
NIPBL-201ENST00000282516 LUC7L2Q9Y383 392 aaKnown RBP9.95□□□□□ -0.82
NIPBL-201ENST00000282516 ZPR1O75312 459 aa9.95□□□□□ -0.82
NIPBL-201ENST00000282516 NUF2Q9BZD4 464 aa9.95□□□□□ -0.82
NIPBL-201ENST00000282516 USH1CQ9Y6N9 552 aa9.95□□□□□ -0.82
NIPBL-201ENST00000282516 TTC36A6NLP5 189 aa9.95□□□□□ -0.82
NIPBL-201ENST00000282516 GOLGA8AA7E2F4 631 aa9.95□□□□□ -0.82
NIPBL-201ENST00000282516 TTC16Q8NEE8 873 aa9.95□□□□□ -0.82
NIPBL-201ENST00000282516 PRPF31Q8WWY3 499 aaKnown RBP9.95□□□□□ -0.82
NIPBL-201ENST00000282516 ERICH3Q5RHP9 1530 aa9.95□□□□□ -0.82
NIPBL-201ENST00000282516 MYCNP04198 464 aaPredicted RBP9.94□□□□□ -0.82
NIPBL-201ENST00000282516 LIMCH1Q9UPQ0 1083 aa9.94□□□□□ -0.82
NIPBL-201ENST00000282516 STX6O43752 255 aa9.94□□□□□ -0.82
NIPBL-201ENST00000282516 PPFIBP2Q8ND30 876 aa9.94□□□□□ -0.82
NIPBL-201ENST00000282516 SPAG5Q96R06 1193 aa9.94□□□□□ -0.82
NIPBL-201ENST00000282516 VCXQ9H320 206 aa9.94□□□□□ -0.82
NIPBL-201ENST00000282516 ATP5DP30049 168 aa9.94□□□□□ -0.82
NIPBL-201ENST00000282516 UBA7P41226 1012 aa9.94□□□□□ -0.82
NIPBL-201ENST00000282516 NLRP5P59047 1200 aa9.94□□□□□ -0.82
NIPBL-201ENST00000282516 PFDN4Q9NQP4 134 aa9.94□□□□□ -0.82
NIPBL-201ENST00000282516 CECR2Q9BXF3 1484 aa9.94□□□□□ -0.82
NIPBL-201ENST00000282516 N4BP3O15049 544 aa9.94□□□□□ -0.82
NIPBL-201ENST00000282516 MAP7Q14244 749 aa9.94□□□□□ -0.82
NIPBL-201ENST00000282516 ADCY5O95622 1261 aa9.94□□□□□ -0.82
NIPBL-201ENST00000282516 GOLGA1Q92805 767 aa9.94□□□□□ -0.82
NIPBL-201ENST00000282516 ATP11AP98196 1134 aa9.94□□□□□ -0.82
NIPBL-201ENST00000282516 TTF1Q15361 905 aaPredicted RBP9.94□□□□□ -0.82
NIPBL-201ENST00000282516 CACNA2D3Q8IZS8 1091 aa9.94□□□□□ -0.82
NIPBL-201ENST00000282516 IDEP14735 1019 aa9.94□□□□□ -0.82
NIPBL-201ENST00000282516 SPAG1Q07617 926 aa9.94□□□□□ -0.82
NIPBL-201ENST00000282516 GBP6Q6ZN66 633 aa9.94□□□□□ -0.82
NIPBL-201ENST00000282516 ANKRD50Q9ULJ7 1429 aa9.93□□□□□ -0.82
NIPBL-201ENST00000282516 ZNF444Q8N0Y2 327 aaPredicted RBP9.93□□□□□ -0.82
NIPBL-201ENST00000282516 AFAP1L2Q8N4X5 818 aa9.93□□□□□ -0.82
NIPBL-201ENST00000282516 SELENOSQ9BQE4 189 aa9.93□□□□□ -0.82
NIPBL-201ENST00000282516 CCT6BQ92526 530 aa9.93□□□□□ -0.82
NIPBL-201ENST00000282516 CCDC114Q96M63 670 aa9.93□□□□□ -0.82
NIPBL-201ENST00000282516 USP25Q9UHP3 1055 aa9.93□□□□□ -0.82
NIPBL-201ENST00000282516 CCDC82Q8N4S0 544 aa9.93□□□□□ -0.82
NIPBL-201ENST00000282516 MTRF1LQ9UGC7 380 aaKnown RBP9.93□□□□□ -0.82
NIPBL-201ENST00000282516 TSNAXIP1Q2TAA8 658 aa9.93□□□□□ -0.82
NIPBL-201ENST00000282516 CCDC102BQ68D86 513 aa9.93□□□□□ -0.82
NIPBL-201ENST00000282516 SULT6B1Q6IMI4 303 aa9.93□□□□□ -0.82
NIPBL-201ENST00000282516 FMNL3Q8IVF7 1028 aa9.93□□□□□ -0.82
NIPBL-201ENST00000282516 DAPK1P53355 1430 aa9.93□□□□□ -0.82
NIPBL-201ENST00000282516 EEF2P13639 858 aaKnown RBP9.93□□□□□ -0.82
NIPBL-201ENST00000282516 GBP1P32455 592 aa9.93□□□□□ -0.82
NIPBL-201ENST00000282516 PDE4BQ07343 736 aa9.93□□□□□ -0.82
NIPBL-201ENST00000282516 TBC1D31Q96DN5 1066 aa9.93□□□□□ -0.82
NIPBL-201ENST00000282516 RABGAP1Q9Y3P9 1069 aa9.93□□□□□ -0.82
NIPBL-201ENST00000282516 HECW1Q76N89 1606 aa9.93□□□□□ -0.82
NIPBL-201ENST00000282516 SATB1Q01826 763 aa9.93□□□□□ -0.82
NIPBL-201ENST00000282516 CCDC50Q8IVM0 306 aa9.93□□□□□ -0.82
NIPBL-201ENST00000282516 CA8P35219 290 aa9.92□□□□□ -0.82
NIPBL-201ENST00000282516 PHACTR2O75167 634 aa9.92□□□□□ -0.82
NIPBL-201ENST00000282516 NAA25Q14CX7 972 aa9.92□□□□□ -0.82
NIPBL-201ENST00000282516 UVSSAQ2YD98 709 aa9.92□□□□□ -0.82
NIPBL-201ENST00000282516 A0A1B0GUA9 196 aa9.92□□□□□ -0.82
NIPBL-201ENST00000282516 ARID4AP29374 1257 aaPredicted RBP9.92□□□□□ -0.82
NIPBL-201ENST00000282516 FYB2Q5VWT5 728 aa9.92□□□□□ -0.82
NIPBL-201ENST00000282516 CPLX4Q7Z7G2 160 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms