RNA–Protein interactions for RNA: ENST00000281047.3

MSGN1-201, Transcript of mesogenin 1, humanhuman

APPRIS P1 BASIC

Gene MSGN1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1-201ENST00000281047 CHPF2Q9P2E5 772 aa25.22■■□□□ 1.63
MSGN1-201ENST00000281047 ZNF853P0CG23 659 aa25.21■■□□□ 1.63
MSGN1-201ENST00000281047 GNAI1P63096 354 aa25.21■■□□□ 1.63
MSGN1-201ENST00000281047 UTP14AQ9BVJ6 771 aaKnown RBP25.21■■□□□ 1.63
MSGN1-201ENST00000281047 DBF4Q9UBU7 674 aaPredicted RBP25.21■■□□□ 1.63
MSGN1-201ENST00000281047 CCDC88AQ3V6T2 1871 aa25.21■■□□□ 1.63
MSGN1-201ENST00000281047 RNF123Q5XPI4 1314 aa25.2■■□□□ 1.62
MSGN1-201ENST00000281047 VEGFAP15692 232 aaPredicted RBP25.2■■□□□ 1.62
MSGN1-201ENST00000281047 FKBP4Q02790 459 aaKnown RBP eCLIP25.2■■□□□ 1.62
MSGN1-201ENST00000281047 DUSP27Q5VZP5 1158 aa25.2■■□□□ 1.62
MSGN1-201ENST00000281047 HOXA10P31260 410 aaPredicted RBP25.19■■□□□ 1.62
MSGN1-201ENST00000281047 FSTL1Q12841 308 aa25.19■■□□□ 1.62
MSGN1-201ENST00000281047 ANP32CO43423 234 aa25.18■■□□□ 1.62
MSGN1-201ENST00000281047 RBM17Q96I25 401 aaKnown RBP25.18■■□□□ 1.62
MSGN1-201ENST00000281047 NLRP3Q96P20 1036 aa25.18■■□□□ 1.62
MSGN1-201ENST00000281047 DICER1Q9UPY3 1922 aaKnown RBP25.18■■□□□ 1.62
MSGN1-201ENST00000281047 APLP1P51693 650 aa25.17■■□□□ 1.62
MSGN1-201ENST00000281047 TCIRG1Q13488 830 aa25.17■■□□□ 1.62
MSGN1-201ENST00000281047 CC2D2BQ6DHV5 1058 aa25.17■■□□□ 1.62
MSGN1-201ENST00000281047 HYPKQ9NX55 129 aa25.17■■□□□ 1.62
MSGN1-201ENST00000281047 CCDC184Q52MB2 194 aa25.16■■□□□ 1.62
MSGN1-201ENST00000281047 NLRP10Q86W26 655 aa25.16■■□□□ 1.62
MSGN1-201ENST00000281047 PLBD2Q8NHP8 589 aa25.16■■□□□ 1.62
MSGN1-201ENST00000281047 CRAMP1Q96RY5 1269 aa25.16■■□□□ 1.62
MSGN1-201ENST00000281047 SLC10A5Q5PT55 438 aa25.15■■□□□ 1.62
MSGN1-201ENST00000281047 OLFM4Q6UX06 510 aa25.15■■□□□ 1.62
MSGN1-201ENST00000281047 SMC1BQ8NDV3 1235 aa25.15■■□□□ 1.62
MSGN1-201ENST00000281047 ANKRD36CQ5JPF3 1778 aa25.14■■□□□ 1.62
MSGN1-201ENST00000281047 GRIPAP1Q4V328 841 aa25.14■■□□□ 1.62
MSGN1-201ENST00000281047 ANKRD13DQ6ZTN6 518 aa25.14■■□□□ 1.62
MSGN1-201ENST00000281047 ZNF277Q9NRM2 450 aaPredicted RBP25.14■■□□□ 1.62
MSGN1-201ENST00000281047 WDR90Q96KV7 1748 aa25.13■■□□□ 1.61
MSGN1-201ENST00000281047 CHMP4AQ9BY43 222 aa25.13■■□□□ 1.61
MSGN1-201ENST00000281047 MRS2Q9HD23 443 aa25.13■■□□□ 1.61
MSGN1-201ENST00000281047 TRMT112Q9UI30 125 aaKnown RBP25.13■■□□□ 1.61
MSGN1-201ENST00000281047 C3orf67Q6ZVT6 689 aa25.12■■□□□ 1.61
MSGN1-201ENST00000281047 SYNE4Q8N205 404 aa25.12■■□□□ 1.61
MSGN1-201ENST00000281047 PSMD1Q99460 953 aa25.12■■□□□ 1.61
MSGN1-201ENST00000281047 SH3TC1Q8TE82 1336 aa25.12■■□□□ 1.61
MSGN1-201ENST00000281047 PPEF1O14829 653 aaPredicted RBP25.11■■□□□ 1.61
MSGN1-201ENST00000281047 IARSP41252 1262 aaKnown RBP25.11■■□□□ 1.61
MSGN1-201ENST00000281047 TMX4Q9H1E5 349 aaPredicted RBP25.11■■□□□ 1.61
MSGN1-201ENST00000281047 CEP350Q5VT06 3117 aa25.1■■□□□ 1.61
MSGN1-201ENST00000281047 ELL2O00472 640 aaPredicted RBP25.1■■□□□ 1.61
MSGN1-201ENST00000281047 CCDC27Q2M243 656 aa25.1■■□□□ 1.61
MSGN1-201ENST00000281047 POTECB2RU33 542 aa25.09■■□□□ 1.61
MSGN1-201ENST00000281047 DDNO94850 711 aaPredicted RBP25.09■■□□□ 1.61
MSGN1-201ENST00000281047 SNED1Q8TER0 1413 aa25.09■■□□□ 1.61
MSGN1-201ENST00000281047 HCLS1P14317 486 aaPredicted RBP25.08■■□□□ 1.61
MSGN1-201ENST00000281047 GOLGA2Q08379 1002 aa25.08■■□□□ 1.61
MSGN1-201ENST00000281047 C8orf58Q8NAV2 365 aa25.07■■□□□ 1.6
MSGN1-201ENST00000281047 JDP2Q8WYK2 163 aa25.07■■□□□ 1.6
MSGN1-201ENST00000281047 ISCA1Q9BUE6 129 aa25.07■■□□□ 1.6
MSGN1-201ENST00000281047 IQCA1LA6NCM1 817 aa25.06■■□□□ 1.6
MSGN1-201ENST00000281047 TCERG1O14776 1098 aaKnown RBP25.06■■□□□ 1.6
MSGN1-201ENST00000281047 NCBP3Q53F19 620 aaKnown RBP25.06■■□□□ 1.6
MSGN1-201ENST00000281047 CCDC30Q5VVM6 783 aa25.06■■□□□ 1.6
MSGN1-201ENST00000281047 ABCC4O15439 1325 aa25.06■■□□□ 1.6
MSGN1-201ENST00000281047 DDX46Q7L014 1031 aaKnown RBP25.05■■□□□ 1.6
MSGN1-201ENST00000281047 RIC3Q7Z5B4 369 aa25.05■■□□□ 1.6
MSGN1-201ENST00000281047 WWC1Q8IX03 1113 aa25.05■■□□□ 1.6
MSGN1-201ENST00000281047 L3MBTL3Q96JM7 780 aaPredicted RBP25.05■■□□□ 1.6
MSGN1-201ENST00000281047 ATP6V0A2Q9Y487 856 aa25.05■■□□□ 1.6
MSGN1-201ENST00000281047 ATP5J2-PTCD1G3V325 749 aa25.04■■□□□ 1.6
MSGN1-201ENST00000281047 BBOX1O75936 387 aa25.04■■□□□ 1.6
MSGN1-201ENST00000281047 TRIM28Q13263 835 aaKnown RBP25.04■■□□□ 1.6
MSGN1-201ENST00000281047 FZD9O00144 591 aa25.03■■□□□ 1.6
MSGN1-201ENST00000281047 PHAXQ9H814 394 aaKnown RBP25.03■■□□□ 1.6
MSGN1-201ENST00000281047 ZNF541Q9H0D2 1346 aa25.03■■□□□ 1.6
MSGN1-201ENST00000281047 TSR2Q969E8 191 aaKnown RBP25.02■■□□□ 1.6
MSGN1-201ENST00000281047 FAM89AQ96GI7 184 aa25.02■■□□□ 1.6
MSGN1-201ENST00000281047 IL16Q14005 1332 aa25.02■■□□□ 1.6
MSGN1-201ENST00000281047 DDX58O95786 925 aaKnown RBP25.01■■□□□ 1.59
MSGN1-201ENST00000281047 GRAPQ13588 217 aa25.01■■□□□ 1.59
MSGN1-201ENST00000281047 LARGE2Q8N3Y3 721 aa25.01■■□□□ 1.59
MSGN1-201ENST00000281047 GRAPLQ8TC17 118 aaPredicted RBP25.01■■□□□ 1.59
MSGN1-201ENST00000281047 ZNF428Q96B54 188 aa25.01■■□□□ 1.59
MSGN1-201ENST00000281047 EIF6P56537 245 aaKnown RBP25■■□□□ 1.59
MSGN1-201ENST00000281047 TMC4Q7Z404 712 aa25■■□□□ 1.59
MSGN1-201ENST00000281047 SP8Q8IXZ3 490 aa25■■□□□ 1.59
MSGN1-201ENST00000281047 TSPYL6Q8N831 410 aa25■■□□□ 1.59
MSGN1-201ENST00000281047 SUPT20HQ8NEM7 779 aa25■■□□□ 1.59
MSGN1-201ENST00000281047 LAMB2P55268 1798 aa25■■□□□ 1.59
MSGN1-201ENST00000281047 GPC2Q8N158 579 aa24.99■■□□□ 1.59
MSGN1-201ENST00000281047 STK31Q9BXU1 1019 aa24.99■■□□□ 1.59
MSGN1-201ENST00000281047 VPS33BQ9H267 617 aa24.99■■□□□ 1.59
MSGN1-201ENST00000281047 HSP90B1P14625 803 aaKnown RBP24.98■■□□□ 1.59
MSGN1-201ENST00000281047 CHADLQ6NUI6 762 aa24.98■■□□□ 1.59
MSGN1-201ENST00000281047 SLC51AQ86UW1 340 aa24.98■■□□□ 1.59
MSGN1-201ENST00000281047 DNAJC5GQ8N7S2 189 aa24.98■■□□□ 1.59
MSGN1-201ENST00000281047 TAF1DQ9H5J8 278 aaPredicted RBP24.98■■□□□ 1.59
MSGN1-201ENST00000281047 HACL1Q9UJ83 578 aa24.98■■□□□ 1.59
MSGN1-201ENST00000281047 SCN4AP35499 1836 aa24.98■■□□□ 1.59
MSGN1-201ENST00000281047 PPIP5K2O43314 1243 aa24.97■■□□□ 1.59
MSGN1-201ENST00000281047 SF3B3Q15393 1217 aaKnown RBP24.97■■□□□ 1.59
MSGN1-201ENST00000281047 DPP8Q6V1X1 898 aaPredicted RBP24.97■■□□□ 1.59
MSGN1-201ENST00000281047 NIM1KQ8IY84 436 aa24.97■■□□□ 1.59
MSGN1-201ENST00000281047 ZBTB38Q8NAP3 1195 aaPredicted RBP24.97■■□□□ 1.59
MSGN1-201ENST00000281047 MYD88Q99836 296 aa24.97■■□□□ 1.59
MSGN1-201ENST00000281047 IRS4O14654 1257 aaPredicted RBP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms