RNA–Protein interactions for RNA: ENST00000279477.11

SIRPB1-202, Transcript of signal regulatory protein beta 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIRPB1, Length 2,207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-202ENST00000279477 ZSCAN22P10073 491 aaPredicted RBP13.68□□□□□ -0.22
SIRPB1-202ENST00000279477 GCKRQ14397 625 aa13.68□□□□□ -0.22
SIRPB1-202ENST00000279477 FMNL2Q96PY5 1086 aa13.68□□□□□ -0.22
SIRPB1-202ENST00000279477 ZSWIM6Q9HCJ5 1215 aa13.68□□□□□ -0.22
SIRPB1-202ENST00000279477 PA2G4Q9UQ80 394 aaKnown RBP13.68□□□□□ -0.22
SIRPB1-202ENST00000279477 PRIM1P49642 420 aaKnown RBP13.68□□□□□ -0.22
SIRPB1-202ENST00000279477 AIMP1Q12904 312 aaKnown RBP13.68□□□□□ -0.22
SIRPB1-202ENST00000279477 ANKRD1Q15327 319 aa13.68□□□□□ -0.22
SIRPB1-202ENST00000279477 VSIG10Q8N0Z9 540 aa13.68□□□□□ -0.22
SIRPB1-202ENST00000279477 PDRG1Q9NUG6 133 aa13.68□□□□□ -0.22
SIRPB1-202ENST00000279477 HMG20BQ9P0W2 317 aa13.68□□□□□ -0.22
SIRPB1-202ENST00000279477 STX6O43752 255 aa13.67□□□□□ -0.22
SIRPB1-202ENST00000279477 SASH1O94885 1247 aa13.67□□□□□ -0.22
SIRPB1-202ENST00000279477 IGKV5-2P06315 115 aa13.67□□□□□ -0.22
SIRPB1-202ENST00000279477 CSB-PGBD3P0DP91 1061 aa13.67□□□□□ -0.22
SIRPB1-202ENST00000279477 MSNP26038 577 aaKnown RBP13.67□□□□□ -0.22
SIRPB1-202ENST00000279477 ZC3H6P61129 1189 aaKnown RBP13.67□□□□□ -0.22
SIRPB1-202ENST00000279477 RUFY3Q7L099 469 aa13.67□□□□□ -0.22
SIRPB1-202ENST00000279477 RASEFQ8IZ41 740 aa13.67□□□□□ -0.22
SIRPB1-202ENST00000279477 FAM184AQ8NB25 1140 aa13.67□□□□□ -0.22
SIRPB1-202ENST00000279477 KAZALD1Q96I82 304 aa13.67□□□□□ -0.22
SIRPB1-202ENST00000279477 PDLIM2Q96JY6 352 aa13.67□□□□□ -0.22
SIRPB1-202ENST00000279477 JAKMIP1Q96N16 626 aaKnown RBP13.67□□□□□ -0.22
SIRPB1-202ENST00000279477 JCADQ9P266 1359 aa13.67□□□□□ -0.22
SIRPB1-202ENST00000279477 PRAMEF22A3QJZ6 481 aa13.67□□□□□ -0.22
SIRPB1-202ENST00000279477 KCNJ4P48050 445 aa13.67□□□□□ -0.22
SIRPB1-202ENST00000279477 NECTIN1Q15223 517 aa13.67□□□□□ -0.22
SIRPB1-202ENST00000279477 FOXD4L5Q5VV16 416 aaPredicted RBP13.67□□□□□ -0.22
SIRPB1-202ENST00000279477 CADPS2Q86UW7 1296 aa13.67□□□□□ -0.22
SIRPB1-202ENST00000279477 TICAM2Q86XR7 235 aa13.67□□□□□ -0.22
SIRPB1-202ENST00000279477 XAGE3Q8WTP9 111 aa13.67□□□□□ -0.22
SIRPB1-202ENST00000279477 FOXD4L4Q8WXT5 416 aaPredicted RBP13.67□□□□□ -0.22
SIRPB1-202ENST00000279477 RBSNQ9H1K0 784 aa13.67□□□□□ -0.22
SIRPB1-202ENST00000279477 TSPY26PQ9H489 355 aa13.67□□□□□ -0.22
SIRPB1-202ENST00000279477 COPRSQ9NQ92 184 aa13.67□□□□□ -0.22
SIRPB1-202ENST00000279477 MED23Q9ULK4 1368 aa13.66□□□□□ -0.22
SIRPB1-202ENST00000279477 SYCE3A1L190 88 aa13.66□□□□□ -0.22
SIRPB1-202ENST00000279477 PRPF40BQ6NWY9 871 aaKnown RBP13.66□□□□□ -0.22
SIRPB1-202ENST00000279477 FSD1Q9BTV5 496 aa13.66□□□□□ -0.22
SIRPB1-202ENST00000279477 RBM27Q9P2N5 1060 aaKnown RBP13.66□□□□□ -0.22
SIRPB1-202ENST00000279477 TMEM94Q12767 1356 aa13.66□□□□□ -0.22
SIRPB1-202ENST00000279477 ANKRD13DQ6ZTN6 518 aa13.66□□□□□ -0.22
SIRPB1-202ENST00000279477 MAP4K1Q92918 833 aa13.66□□□□□ -0.22
SIRPB1-202ENST00000279477 EAF2Q96CJ1 260 aaPredicted RBP13.66□□□□□ -0.22
SIRPB1-202ENST00000279477 MYD88Q99836 296 aa13.66□□□□□ -0.22
SIRPB1-202ENST00000279477 ALDH8A1Q9H2A2 487 aaPredicted RBP13.66□□□□□ -0.22
SIRPB1-202ENST00000279477 RBM8AQ9Y5S9 174 aaKnown RBP13.66□□□□□ -0.22
SIRPB1-202ENST00000279477 UBR2Q8IWV8 1755 aa13.65□□□□□ -0.22
SIRPB1-202ENST00000279477 GLI3P10071 1580 aa13.65□□□□□ -0.22
SIRPB1-202ENST00000279477 F13A1P00488 732 aa13.65□□□□□ -0.22
SIRPB1-202ENST00000279477 MCM5P33992 734 aa13.65□□□□□ -0.22
SIRPB1-202ENST00000279477 TERF1P54274 439 aa13.65□□□□□ -0.22
SIRPB1-202ENST00000279477 UBE2HP62256 183 aa13.65□□□□□ -0.22
SIRPB1-202ENST00000279477 COPS6Q7L5N1 327 aa13.65□□□□□ -0.22
SIRPB1-202ENST00000279477 PDCL3Q9H2J4 239 aa13.65□□□□□ -0.22
SIRPB1-202ENST00000279477 STRCP1A6NGW2 1772 aa13.65□□□□□ -0.23
SIRPB1-202ENST00000279477 PDCP20941 246 aa13.64□□□□□ -0.23
SIRPB1-202ENST00000279477 PTH1RQ03431 593 aa13.64□□□□□ -0.23
SIRPB1-202ENST00000279477 NMIQ13287 307 aaPredicted RBP13.64□□□□□ -0.23
SIRPB1-202ENST00000279477 KRT32Q14532 448 aa13.64□□□□□ -0.23
SIRPB1-202ENST00000279477 RABL6Q3YEC7 729 aaPredicted RBP13.64□□□□□ -0.23
SIRPB1-202ENST00000279477 CCDC183Q5T5S1 534 aa13.64□□□□□ -0.23
SIRPB1-202ENST00000279477 CREB3L3Q68CJ9 461 aa13.64□□□□□ -0.23
SIRPB1-202ENST00000279477 NFATC2IPQ8NCF5 419 aa13.64□□□□□ -0.23
SIRPB1-202ENST00000279477 ZNF496Q96IT1 587 aaPredicted RBP13.64□□□□□ -0.23
SIRPB1-202ENST00000279477 MAP7D2Q96T17 732 aa13.64□□□□□ -0.23
SIRPB1-202ENST00000279477 ZMYND15Q9H091 742 aa13.64□□□□□ -0.23
SIRPB1-202ENST00000279477 PAPPAQ13219 1627 aa13.64□□□□□ -0.23
SIRPB1-202ENST00000279477 MYL6BP14649 208 aa13.64□□□□□ -0.23
SIRPB1-202ENST00000279477 SYT1P21579 422 aa13.64□□□□□ -0.23
SIRPB1-202ENST00000279477 SLC39A6Q13433 755 aa13.64□□□□□ -0.23
SIRPB1-202ENST00000279477 NUP188Q5SRE5 1749 aa13.64□□□□□ -0.23
SIRPB1-202ENST00000279477 USP48Q86UV5 1035 aa13.64□□□□□ -0.23
SIRPB1-202ENST00000279477 ATP5JP18859 108 aa13.63□□□□□ -0.23
SIRPB1-202ENST00000279477 UVSSAQ2YD98 709 aa13.63□□□□□ -0.23
SIRPB1-202ENST00000279477 PLBD2Q8NHP8 589 aa13.63□□□□□ -0.23
SIRPB1-202ENST00000279477 CCDC39Q9UFE4 941 aa13.63□□□□□ -0.23
SIRPB1-202ENST00000279477 TCHHQ07283 1943 aa13.63□□□□□ -0.23
SIRPB1-202ENST00000279477 SPEF2Q9C093 1822 aa13.63□□□□□ -0.23
SIRPB1-202ENST00000279477 CABP4P57796 275 aa13.63□□□□□ -0.23
SIRPB1-202ENST00000279477 TSGA10IPQ3SY00 556 aa13.63□□□□□ -0.23
SIRPB1-202ENST00000279477 BLOC1S2Q6QNY1 142 aa13.63□□□□□ -0.23
SIRPB1-202ENST00000279477 LRP10Q7Z4F1 713 aa13.62□□□□□ -0.23
SIRPB1-202ENST00000279477 CCDC8Q9H0W5 538 aaPredicted RBP13.62□□□□□ -0.23
SIRPB1-202ENST00000279477 SPATA31A3Q5VYP0 1347 aa13.62□□□□□ -0.23
SIRPB1-202ENST00000279477 PCDH11XQ9BZA7 1347 aa13.62□□□□□ -0.23
SIRPB1-202ENST00000279477 PCDH11YQ9BZA8 1340 aa13.62□□□□□ -0.23
SIRPB1-202ENST00000279477 SLC27A2O14975 620 aa13.62□□□□□ -0.23
SIRPB1-202ENST00000279477 GJB2P29033 226 aa13.62□□□□□ -0.23
SIRPB1-202ENST00000279477 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.62□□□□□ -0.23
SIRPB1-202ENST00000279477 CCDC83Q8IWF9 413 aa13.62□□□□□ -0.23
SIRPB1-202ENST00000279477 SIL1Q9H173 461 aa13.62□□□□□ -0.23
SIRPB1-202ENST00000279477 NSFL1CQ9UNZ2 370 aaKnown RBP13.62□□□□□ -0.23
SIRPB1-202ENST00000279477 TNNI3KQ59H18 835 aa13.61□□□□□ -0.23
SIRPB1-202ENST00000279477 NOL7Q9UMY1 257 aaKnown RBP13.61□□□□□ -0.23
SIRPB1-202ENST00000279477 FPGT-TNNI3KV9GXZ4 949 aa13.61□□□□□ -0.23
SIRPB1-202ENST00000279477 ADCK5Q3MIX3 580 aa13.6□□□□□ -0.23
SIRPB1-202ENST00000279477 FAM227BQ96M60 508 aa13.6□□□□□ -0.23
SIRPB1-202ENST00000279477 BOLA2Q9H3K6 86 aa13.6□□□□□ -0.23
SIRPB1-202ENST00000279477 A0A0D9SFI3 127 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms