RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 G3BP1Q13283 466 aaKnown RBP eCLIP27.13■■□□□ 1.93
CCDC7-201ENST00000277657 TSHZ3Q63HK5 1081 aa27.13■■□□□ 1.93
CCDC7-201ENST00000277657 NUTM1Q86Y26 1132 aa27.13■■□□□ 1.93
CCDC7-201ENST00000277657 USP42Q9H9J4 1324 aaKnown RBP27.13■■□□□ 1.93
CCDC7-201ENST00000277657 ERVV-1B6SEH8 477 aa27.13■■□□□ 1.93
CCDC7-201ENST00000277657 EIF5P55010 431 aaKnown RBP27.13■■□□□ 1.93
CCDC7-201ENST00000277657 COL5A3P25940 1745 aaPredicted RBP27.12■■□□□ 1.93
CCDC7-201ENST00000277657 SASH1O94885 1247 aa27.12■■□□□ 1.93
CCDC7-201ENST00000277657 CRKLP46109 303 aaKnown RBP27.12■■□□□ 1.93
CCDC7-201ENST00000277657 HLFQ16534 295 aa27.12■■□□□ 1.93
CCDC7-201ENST00000277657 HSP90AB3PQ58FF7 597 aa27.12■■□□□ 1.93
CCDC7-201ENST00000277657 CLASRPQ8N2M8 674 aaKnown RBP27.12■■□□□ 1.93
CCDC7-201ENST00000277657 EIF5BO60841 1220 aaKnown RBP27.11■■□□□ 1.93
CCDC7-201ENST00000277657 TRPC5Q9UL62 973 aaPredicted RBP27.11■■□□□ 1.93
CCDC7-201ENST00000277657 NHSQ6T4R5 1651 aa27.11■■□□□ 1.93
CCDC7-201ENST00000277657 PTPN12Q05209 780 aaKnown RBP27.1■■□□□ 1.93
CCDC7-201ENST00000277657 LMBR1LQ6UX01 489 aa27.1■■□□□ 1.93
CCDC7-201ENST00000277657 MYH14Q7Z406 1995 aaKnown RBP27.1■■□□□ 1.93
CCDC7-201ENST00000277657 NUP98P52948 1817 aa27.1■■□□□ 1.93
CCDC7-201ENST00000277657 DZIP3Q86Y13 1208 aaKnown RBP27.1■■□□□ 1.93
CCDC7-201ENST00000277657 PCCAP05165 728 aaPredicted RBP27.09■■□□□ 1.93
CCDC7-201ENST00000277657 KLHDC4Q8TBB5 520 aa27.09■■□□□ 1.93
CCDC7-201ENST00000277657 PI4K2BQ8TCG2 481 aa27.09■■□□□ 1.93
CCDC7-201ENST00000277657 ARXQ96QS3 562 aa27.09■■□□□ 1.93
CCDC7-201ENST00000277657 RBM25P49756 843 aaKnown RBP27.08■■□□□ 1.93
CCDC7-201ENST00000277657 RTL5Q5HYW3 569 aaPredicted RBP27.08■■□□□ 1.93
CCDC7-201ENST00000277657 SIL1Q9H173 461 aa27.08■■□□□ 1.93
CCDC7-201ENST00000277657 TTC41PQ6P2S7 1318 aa27.08■■□□□ 1.93
CCDC7-201ENST00000277657 BTAF1O14981 1849 aa27.06■■□□□ 1.92
CCDC7-201ENST00000277657 CASC1Q6TDU7 716 aa27.06■■□□□ 1.92
CCDC7-201ENST00000277657 NLRP10Q86W26 655 aa27.06■■□□□ 1.92
CCDC7-201ENST00000277657 ZBTB38Q8NAP3 1195 aaPredicted RBP27.06■■□□□ 1.92
CCDC7-201ENST00000277657 TBC1D2BQ9UPU7 963 aa27.06■■□□□ 1.92
CCDC7-201ENST00000277657 PLA2G12BQ9BX93 195 aa27.06■■□□□ 1.92
CCDC7-201ENST00000277657 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.06■■□□□ 1.92
CCDC7-201ENST00000277657 PTF1AQ7RTS3 328 aa27.05■■□□□ 1.92
CCDC7-201ENST00000277657 CDHR2Q9BYE9 1310 aa27.04■■□□□ 1.92
CCDC7-201ENST00000277657 IFIT2P09913 472 aaKnown RBP27.03■■□□□ 1.92
CCDC7-201ENST00000277657 AACSQ86V21 672 aa27.03■■□□□ 1.92
CCDC7-201ENST00000277657 EAF2Q96CJ1 260 aaPredicted RBP27.03■■□□□ 1.92
CCDC7-201ENST00000277657 GPTP24298 496 aa27.02■■□□□ 1.92
CCDC7-201ENST00000277657 ZNF34Q8IZ26 560 aa27.02■■□□□ 1.92
CCDC7-201ENST00000277657 FAM89AQ96GI7 184 aa27.02■■□□□ 1.92
CCDC7-201ENST00000277657 SBF2Q86WG5 1849 aa27.02■■□□□ 1.92
CCDC7-201ENST00000277657 GLRX3O76003 335 aaKnown RBP27.02■■□□□ 1.92
CCDC7-201ENST00000277657 SEPT12Q8IYM1 358 aa27.02■■□□□ 1.92
CCDC7-201ENST00000277657 ECHDC1Q9NTX5 307 aa27.02■■□□□ 1.92
CCDC7-201ENST00000277657 TRIM6-TRIM34B2RNG4 842 aa27.01■■□□□ 1.91
CCDC7-201ENST00000277657 LINC00116Q8NCU8 138 aa27.01■■□□□ 1.91
CCDC7-201ENST00000277657 GPATCH3Q96I76 525 aa27.01■■□□□ 1.91
CCDC7-201ENST00000277657 ERC2O15083 957 aa27■■□□□ 1.91
CCDC7-201ENST00000277657 FAM182BQ5T319 152 aa27■■□□□ 1.91
CCDC7-201ENST00000277657 QTRT2Q9H974 415 aaKnown RBP27■■□□□ 1.91
CCDC7-201ENST00000277657 CHMP3Q9Y3E7 222 aa27■■□□□ 1.91
CCDC7-201ENST00000277657 CAMTA2O94983 1202 aa27■■□□□ 1.91
CCDC7-201ENST00000277657 RILPL2Q969X0 211 aa27■■□□□ 1.91
CCDC7-201ENST00000277657 CSF1RP07333 972 aa26.99■■□□□ 1.91
CCDC7-201ENST00000277657 AK9Q5TCS8 1911 aa26.99■■□□□ 1.91
CCDC7-201ENST00000277657 UBN2Q6ZU65 1347 aa26.99■■□□□ 1.91
CCDC7-201ENST00000277657 CNTNAP4Q9C0A0 1308 aa26.99■■□□□ 1.91
CCDC7-201ENST00000277657 ERICH6Q7L0X2 663 aa26.98■■□□□ 1.91
CCDC7-201ENST00000277657 CHMLP26374 656 aa26.98■■□□□ 1.91
CCDC7-201ENST00000277657 TFCP2Q12800 502 aa26.97■■□□□ 1.91
CCDC7-201ENST00000277657 ATG9AQ7Z3C6 839 aa26.97■■□□□ 1.91
CCDC7-201ENST00000277657 USP26Q9BXU7 913 aa26.96■■□□□ 1.91
CCDC7-201ENST00000277657 CCDC8Q9H0W5 538 aaPredicted RBP26.96■■□□□ 1.91
CCDC7-201ENST00000277657 DAXXQ9UER7 740 aaPredicted RBP26.96■■□□□ 1.91
CCDC7-201ENST00000277657 LY75O60449 1722 aa26.96■■□□□ 1.91
CCDC7-201ENST00000277657 BCORQ6W2J9 1755 aa26.96■■□□□ 1.91
CCDC7-201ENST00000277657 TNNI3KQ59H18 835 aa26.96■■□□□ 1.91
CCDC7-201ENST00000277657 SYNE4Q8N205 404 aa26.96■■□□□ 1.91
CCDC7-201ENST00000277657 TLR7Q9NYK1 1049 aaKnown RBP26.96■■□□□ 1.91
CCDC7-201ENST00000277657 TRMT112Q9UI30 125 aaKnown RBP26.96■■□□□ 1.91
CCDC7-201ENST00000277657 FPGT-TNNI3KV9GXZ4 949 aa26.96■■□□□ 1.91
CCDC7-201ENST00000277657 CIAO1O76071 339 aa26.95■■□□□ 1.9
CCDC7-201ENST00000277657 REC8O95072 547 aa26.95■■□□□ 1.9
CCDC7-201ENST00000277657 SLC4A3P48751 1232 aa26.95■■□□□ 1.9
CCDC7-201ENST00000277657 BECN1Q14457 450 aa26.95■■□□□ 1.9
CCDC7-201ENST00000277657 CNTROBQ8N137 903 aa26.95■■□□□ 1.9
CCDC7-201ENST00000277657 KIF2CQ99661 725 aa26.95■■□□□ 1.9
CCDC7-201ENST00000277657 MYH3P11055 1940 aa26.94■■□□□ 1.9
CCDC7-201ENST00000277657 IL15P40933 162 aaPredicted RBP26.94■■□□□ 1.9
CCDC7-201ENST00000277657 RC3H1Q5TC82 1133 aaKnown RBP26.94■■□□□ 1.9
CCDC7-201ENST00000277657 ESYT1Q9BSJ8 1104 aa26.94■■□□□ 1.9
CCDC7-201ENST00000277657 EYA2O00167 538 aa26.93■■□□□ 1.9
CCDC7-201ENST00000277657 CCDC57Q2TAC2 916 aa26.93■■□□□ 1.9
CCDC7-201ENST00000277657 FBXO3Q9UK99 471 aa26.93■■□□□ 1.9
CCDC7-201ENST00000277657 IRS4O14654 1257 aaPredicted RBP26.93■■□□□ 1.9
CCDC7-201ENST00000277657 MAP4K4O95819 1239 aaPredicted RBP26.93■■□□□ 1.9
CCDC7-201ENST00000277657 KCNQ4P56696 695 aa26.92■■□□□ 1.9
CCDC7-201ENST00000277657 GPR108Q9NPR9 543 aa26.92■■□□□ 1.9
CCDC7-201ENST00000277657 PARP10Q53GL7 1025 aa26.91■■□□□ 1.9
CCDC7-201ENST00000277657 TTLL11Q8NHH1 800 aa26.91■■□□□ 1.9
CCDC7-201ENST00000277657 ZNF594Q96JF6 807 aaPredicted RBP26.91■■□□□ 1.9
CCDC7-201ENST00000277657 RGL2O15211 777 aa26.91■■□□□ 1.9
CCDC7-201ENST00000277657 CTSWP56202 376 aa26.91■■□□□ 1.9
CCDC7-201ENST00000277657 AK7Q96M32 723 aa26.91■■□□□ 1.9
CCDC7-201ENST00000277657 DBNLQ9UJU6 430 aaKnown RBP26.91■■□□□ 1.9
CCDC7-201ENST00000277657 LRRC24Q50LG9 513 aa26.9■■□□□ 1.9
CCDC7-201ENST00000277657 SUSD4Q5VX71 490 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms