RNA–Protein interactions for RNA: ENST00000276241.10

CT55-201, Transcript of cancer/testis antigen 55, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CT55, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-201ENST00000276241 SPINK5Q9NQ38 1064 aaPredicted RBP17.54■□□□□ 0.4
CT55-201ENST00000276241 RIC1Q4ADV7 1423 aa17.53■□□□□ 0.4
CT55-201ENST00000276241 NPR1P16066 1061 aa17.53■□□□□ 0.4
CT55-201ENST00000276241 DIEXFQ68CQ4 756 aaKnown RBP17.53■□□□□ 0.4
CT55-201ENST00000276241 NLRP10Q86W26 655 aa17.53■□□□□ 0.4
CT55-201ENST00000276241 STK31Q9BXU1 1019 aa17.53■□□□□ 0.4
CT55-201ENST00000276241 ATP5J2-PTCD1G3V325 749 aa17.52■□□□□ 0.4
CT55-201ENST00000276241 EXOSC9Q06265 439 aaKnown RBP17.52■□□□□ 0.4
CT55-201ENST00000276241 C9orf131Q5VYM1 1079 aa17.52■□□□□ 0.4
CT55-201ENST00000276241 RIC3Q7Z5B4 369 aa17.52■□□□□ 0.4
CT55-201ENST00000276241 CHMP4AQ9BY43 222 aa17.52■□□□□ 0.4
CT55-201ENST00000276241 RNF181Q9P0P0 153 aa17.52■□□□□ 0.4
CT55-201ENST00000276241 SLX4Q8IY92 1834 aa17.52■□□□□ 0.39
CT55-201ENST00000276241 KLRG2A4D1S0 409 aaPredicted RBP17.51■□□□□ 0.39
CT55-201ENST00000276241 PIAS4Q8N2W9 510 aaPredicted RBP17.51■□□□□ 0.39
CT55-201ENST00000276241 RPGRQ92834 1020 aaKnown RBP17.51■□□□□ 0.39
CT55-201ENST00000276241 MYH16Q9H6N6 1097 aa17.51■□□□□ 0.39
CT55-201ENST00000276241 TRMT112Q9UI30 125 aaKnown RBP17.51■□□□□ 0.39
CT55-201ENST00000276241 C3orf67Q6ZVT6 689 aa17.5■□□□□ 0.39
CT55-201ENST00000276241 NFKBIEO00221 500 aa17.49■□□□□ 0.39
CT55-201ENST00000276241 CRY2Q49AN0 593 aa17.49■□□□□ 0.39
CT55-201ENST00000276241 TIAM2Q8IVF5 1701 aa17.49■□□□□ 0.39
CT55-201ENST00000276241 MYD88Q99836 296 aa17.49■□□□□ 0.39
CT55-201ENST00000276241 RNF123Q5XPI4 1314 aa17.49■□□□□ 0.39
CT55-201ENST00000276241 SH3TC1Q8TE82 1336 aa17.49■□□□□ 0.39
CT55-201ENST00000276241 ZNF521Q96K83 1311 aa17.49■□□□□ 0.39
CT55-201ENST00000276241 DDX58O95786 925 aaKnown RBP17.48■□□□□ 0.39
CT55-201ENST00000276241 SYNE4Q8N205 404 aa17.48■□□□□ 0.39
CT55-201ENST00000276241 ISCA1Q9BUE6 129 aa17.48■□□□□ 0.39
CT55-201ENST00000276241 GPBP1L1Q9HC44 474 aaPredicted RBP17.48■□□□□ 0.39
CT55-201ENST00000276241 LAMB2P55268 1798 aa17.48■□□□□ 0.39
CT55-201ENST00000276241 SLC4A2P04920 1241 aa17.47■□□□□ 0.39
CT55-201ENST00000276241 HCLS1P14317 486 aaPredicted RBP17.47■□□□□ 0.39
CT55-201ENST00000276241 NLRP3Q96P20 1036 aa17.47■□□□□ 0.39
CT55-201ENST00000276241 DDX60Q8IY21 1712 aaKnown RBP17.47■□□□□ 0.39
CT55-201ENST00000276241 ALDH1B1P30837 517 aa17.47■□□□□ 0.39
CT55-201ENST00000276241 PRELPP51888 382 aa17.47■□□□□ 0.39
CT55-201ENST00000276241 CCDC93Q567U6 631 aa17.47■□□□□ 0.39
CT55-201ENST00000276241 RTL5Q5HYW3 569 aaPredicted RBP17.47■□□□□ 0.39
CT55-201ENST00000276241 SOGA3Q5TF21 947 aa17.47■□□□□ 0.39
CT55-201ENST00000276241 OLFM4Q6UX06 510 aa17.47■□□□□ 0.39
CT55-201ENST00000276241 G2E3Q7L622 706 aa17.47■□□□□ 0.39
CT55-201ENST00000276241 MIER1Q8N108 512 aa17.47■□□□□ 0.39
CT55-201ENST00000276241 RBM17Q96I25 401 aaKnown RBP17.47■□□□□ 0.39
CT55-201ENST00000276241 MAP3K2Q9Y2U5 619 aa17.47■□□□□ 0.39
CT55-201ENST00000276241 FER1L6Q2WGJ9 1857 aa17.46■□□□□ 0.39
CT55-201ENST00000276241 VAMP4O75379 141 aa17.46■□□□□ 0.39
CT55-201ENST00000276241 LMNB1P20700 586 aa17.46■□□□□ 0.39
CT55-201ENST00000276241 FAM89AQ96GI7 184 aa17.46■□□□□ 0.39
CT55-201ENST00000276241 TAOK3Q9H2K8 898 aa17.46■□□□□ 0.39
CT55-201ENST00000276241 SBF1O95248 1867 aa17.46■□□□□ 0.38
CT55-201ENST00000276241 PI4KAP2A4QPH2 592 aa17.44■□□□□ 0.38
CT55-201ENST00000276241 PPEF1O14829 653 aaPredicted RBP17.44■□□□□ 0.38
CT55-201ENST00000276241 FLIIQ13045 1269 aa17.44■□□□□ 0.38
CT55-201ENST00000276241 SLC10A5Q5PT55 438 aa17.44■□□□□ 0.38
CT55-201ENST00000276241 PI4KAP1Q8N8J0 262 aa17.44■□□□□ 0.38
CT55-201ENST00000276241 METTL22Q9BUU2 404 aaPredicted RBP17.44■□□□□ 0.38
CT55-201ENST00000276241 FKBP5Q13451 457 aaPredicted RBP17.43■□□□□ 0.38
CT55-201ENST00000276241 KSR2Q6VAB6 950 aa17.43■□□□□ 0.38
CT55-201ENST00000276241 SLC51AQ86UW1 340 aa17.43■□□□□ 0.38
CT55-201ENST00000276241 C7orf43Q8WVR3 580 aa17.43■□□□□ 0.38
CT55-201ENST00000276241 ABCC4O15439 1325 aa17.43■□□□□ 0.38
CT55-201ENST00000276241 E9PSI1 815 aa17.42■□□□□ 0.38
CT55-201ENST00000276241 HOXA10P31260 410 aaPredicted RBP17.42■□□□□ 0.38
CT55-201ENST00000276241 CWC25Q9NXE8 425 aaPredicted RBP17.42■□□□□ 0.38
CT55-201ENST00000276241 LTBP3Q9NS15 1303 aa17.42■□□□□ 0.38
CT55-201ENST00000276241 IRS4O14654 1257 aaPredicted RBP17.41■□□□□ 0.38
CT55-201ENST00000276241 NEXNQ0ZGT2 675 aa17.41■□□□□ 0.38
CT55-201ENST00000276241 TRIM28Q13263 835 aaKnown RBP17.41■□□□□ 0.38
CT55-201ENST00000276241 JARID2Q92833 1246 aaPredicted RBP17.41■□□□□ 0.38
CT55-201ENST00000276241 CRAMP1Q96RY5 1269 aa17.41■□□□□ 0.38
CT55-201ENST00000276241 FKBP4Q02790 459 aaKnown RBP eCLIP17.4■□□□□ 0.38
CT55-201ENST00000276241 DDX46Q7L014 1031 aaKnown RBP17.4■□□□□ 0.38
CT55-201ENST00000276241 ZBTB38Q8NAP3 1195 aaPredicted RBP17.4■□□□□ 0.38
CT55-201ENST00000276241 CCDC191Q8NCU4 936 aa17.4■□□□□ 0.38
CT55-201ENST00000276241 CCDC88AQ3V6T2 1871 aa17.4■□□□□ 0.38
CT55-201ENST00000276241 CWF19L2Q2TBE0 894 aaKnown RBP17.39■□□□□ 0.38
CT55-201ENST00000276241 RTKN2Q8IZC4 609 aa17.39■□□□□ 0.38
CT55-201ENST00000276241 CDCA7LQ96GN5 454 aa17.39■□□□□ 0.38
CT55-201ENST00000276241 ZNF277Q9NRM2 450 aaPredicted RBP17.39■□□□□ 0.38
CT55-201ENST00000276241 ZC3H4Q9UPT8 1303 aaKnown RBP17.39■□□□□ 0.37
CT55-201ENST00000276241 SNED1Q8TER0 1413 aa17.39■□□□□ 0.37
CT55-201ENST00000276241 IGKV5-2P06315 115 aa17.38■□□□□ 0.37
CT55-201ENST00000276241 SLFN5Q08AF3 891 aa17.38■□□□□ 0.37
CT55-201ENST00000276241 NMRK2Q9NPI5 230 aa17.38■□□□□ 0.37
CT55-201ENST00000276241 KDM2BQ8NHM5 1336 aa17.38■□□□□ 0.37
CT55-201ENST00000276241 PCCAP05165 728 aaPredicted RBP17.38■□□□□ 0.37
CT55-201ENST00000276241 GRAPQ13588 217 aa17.38■□□□□ 0.37
CT55-201ENST00000276241 GRAPLQ8TC17 118 aaPredicted RBP17.38■□□□□ 0.37
CT55-201ENST00000276241 DNAAF4Q8WXU2 420 aa17.38■□□□□ 0.37
CT55-201ENST00000276241 TMX4Q9H1E5 349 aaPredicted RBP17.38■□□□□ 0.37
CT55-201ENST00000276241 COL4A1P02462 1669 aa17.37■□□□□ 0.37
CT55-201ENST00000276241 NEURL1BA8MQ27 555 aa17.37■□□□□ 0.37
CT55-201ENST00000276241 DICER1Q9UPY3 1922 aaKnown RBP17.36■□□□□ 0.37
CT55-201ENST00000276241 F6X3S4 739 aa17.36■□□□□ 0.37
CT55-201ENST00000276241 CC2D2BQ6DHV5 1058 aa17.36■□□□□ 0.37
CT55-201ENST00000276241 CCDC85AQ96PX6 553 aaPredicted RBP17.36■□□□□ 0.37
CT55-201ENST00000276241 TAF1P21675 1872 aa17.35■□□□□ 0.37
CT55-201ENST00000276241 KIF3CO14782 793 aa17.35■□□□□ 0.37
CT55-201ENST00000276241 IARSP41252 1262 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms