RNA–Protein interactions for RNA: ENST00000275223.7

VNN3-201, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-201ENST00000275223 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.12□□□□□ -0.79
VNN3-201ENST00000275223 RNF25Q96BH1 459 aaPredicted RBP10.12□□□□□ -0.79
VNN3-201ENST00000275223 PSMD1Q99460 953 aa10.12□□□□□ -0.79
VNN3-201ENST00000275223 STK24Q9Y6E0 443 aa10.12□□□□□ -0.79
VNN3-201ENST00000275223 HTATSF1O43719 755 aaKnown RBP10.11□□□□□ -0.79
VNN3-201ENST00000275223 DEFB115Q30KQ5 88 aa10.11□□□□□ -0.79
VNN3-201ENST00000275223 EAPPQ56P03 285 aaPredicted RBP10.11□□□□□ -0.79
VNN3-201ENST00000275223 CC2D1BQ5T0F9 858 aaKnown RBP10.11□□□□□ -0.79
VNN3-201ENST00000275223 CNTROBQ8N137 903 aa10.11□□□□□ -0.79
VNN3-201ENST00000275223 JDP2Q8WYK2 163 aa10.11□□□□□ -0.79
VNN3-201ENST00000275223 PCGF6Q9BYE7 350 aa10.11□□□□□ -0.79
VNN3-201ENST00000275223 ZNF277Q9NRM2 450 aaPredicted RBP10.11□□□□□ -0.79
VNN3-201ENST00000275223 NIP7Q9Y221 180 aaKnown RBP eCLIP10.11□□□□□ -0.79
VNN3-201ENST00000275223 USP16Q9Y5T5 823 aa10.11□□□□□ -0.79
VNN3-201ENST00000275223 IARSP41252 1262 aaKnown RBP10.1□□□□□ -0.79
VNN3-201ENST00000275223 CRY2Q49AN0 593 aa10.1□□□□□ -0.79
VNN3-201ENST00000275223 RTF1Q92541 710 aaKnown RBP10.1□□□□□ -0.79
VNN3-201ENST00000275223 CFAP53Q96M91 514 aa10.1□□□□□ -0.79
VNN3-201ENST00000275223 NYXQ9GZU5 481 aa10.1□□□□□ -0.79
VNN3-201ENST00000275223 CLEC11AQ9Y240 323 aa10.1□□□□□ -0.79
VNN3-201ENST00000275223 NUDCQ9Y266 331 aa10.1□□□□□ -0.79
VNN3-201ENST00000275223 ZNF541Q9H0D2 1346 aa10.09□□□□□ -0.79
VNN3-201ENST00000275223 ERVV-1B6SEH8 477 aa10.09□□□□□ -0.79
VNN3-201ENST00000275223 GTF2E1P29083 439 aaPredicted RBP10.09□□□□□ -0.79
VNN3-201ENST00000275223 LBX1P52954 281 aa10.09□□□□□ -0.79
VNN3-201ENST00000275223 PHACTR3Q96KR7 559 aa10.09□□□□□ -0.79
VNN3-201ENST00000275223 RSPH6AQ9H0K4 717 aa10.09□□□□□ -0.79
VNN3-201ENST00000275223 KCNQ3O43525 872 aa10.08□□□□□ -0.8
VNN3-201ENST00000275223 LMOD1P29536 600 aaPredicted RBP10.08□□□□□ -0.8
VNN3-201ENST00000275223 HOXA10P31260 410 aaPredicted RBP10.08□□□□□ -0.8
VNN3-201ENST00000275223 PRKAR2BP31323 418 aa10.08□□□□□ -0.8
VNN3-201ENST00000275223 ECE1P42892 770 aa10.08□□□□□ -0.8
VNN3-201ENST00000275223 EIF6P56537 245 aaKnown RBP10.08□□□□□ -0.8
VNN3-201ENST00000275223 SYNE4Q8N205 404 aa10.08□□□□□ -0.8
VNN3-201ENST00000275223 VPS33BQ9H267 617 aa10.08□□□□□ -0.8
VNN3-201ENST00000275223 DDX21Q9NR30 783 aaKnown RBP eCLIP10.08□□□□□ -0.8
VNN3-201ENST00000275223 RNF123Q5XPI4 1314 aa10.07□□□□□ -0.8
VNN3-201ENST00000275223 WDR33Q9C0J8 1336 aaKnown RBP10.07□□□□□ -0.8
VNN3-201ENST00000275223 SCN11AQ9UI33 1791 aa10.07□□□□□ -0.8
VNN3-201ENST00000275223 COL3A1P02461 1466 aaPredicted RBP10.07□□□□□ -0.8
VNN3-201ENST00000275223 NBPF26B4DH59 902 aa10.07□□□□□ -0.8
VNN3-201ENST00000275223 PITPNM1O00562 1244 aa10.07□□□□□ -0.8
VNN3-201ENST00000275223 HSPA8P11142 646 aaKnown RBP10.07□□□□□ -0.8
VNN3-201ENST00000275223 TAF7Q15545 349 aaPredicted RBP10.07□□□□□ -0.8
VNN3-201ENST00000275223 MAP1SQ66K74 1059 aaPredicted RBP10.07□□□□□ -0.8
VNN3-201ENST00000275223 NBPF10Q6P3W6 841 aaKnown RBP10.07□□□□□ -0.8
VNN3-201ENST00000275223 USP50Q70EL3 339 aaPredicted RBP10.07□□□□□ -0.8
VNN3-201ENST00000275223 NBPF15Q8N660 670 aa10.07□□□□□ -0.8
VNN3-201ENST00000275223 SPDYE1Q8NFV5 336 aaPredicted RBP10.07□□□□□ -0.8
VNN3-201ENST00000275223 ABHD8Q96I13 439 aa10.07□□□□□ -0.8
VNN3-201ENST00000275223 BEGAINQ9BUH8 593 aa10.07□□□□□ -0.8
VNN3-201ENST00000275223 ABT1Q9ULW3 272 aaKnown RBP10.07□□□□□ -0.8
VNN3-201ENST00000275223 SBF1O95248 1867 aa10.06□□□□□ -0.8
VNN3-201ENST00000275223 CA12O43570 354 aa10.06□□□□□ -0.8
VNN3-201ENST00000275223 SLC34A2O95436 690 aa10.06□□□□□ -0.8
VNN3-201ENST00000275223 PNISRQ8TF01 805 aaKnown RBP10.06□□□□□ -0.8
VNN3-201ENST00000275223 IBTKQ9P2D0 1353 aaPredicted RBP10.05□□□□□ -0.8
VNN3-201ENST00000275223 PRAMEF22A3QJZ6 481 aa10.05□□□□□ -0.8
VNN3-201ENST00000275223 MAP2K2P36507 400 aa10.05□□□□□ -0.8
VNN3-201ENST00000275223 PIP4K2AP48426 406 aaPredicted RBP10.05□□□□□ -0.8
VNN3-201ENST00000275223 OLFM4Q6UX06 510 aa10.05□□□□□ -0.8
VNN3-201ENST00000275223 MCM10Q7L590 875 aa10.05□□□□□ -0.8
VNN3-201ENST00000275223 RPGRQ92834 1020 aaKnown RBP10.05□□□□□ -0.8
VNN3-201ENST00000275223 HHIPL1Q96JK4 782 aa10.05□□□□□ -0.8
VNN3-201ENST00000275223 CRAMP1Q96RY5 1269 aa10.05□□□□□ -0.8
VNN3-201ENST00000275223 TMX4Q9H1E5 349 aaPredicted RBP10.05□□□□□ -0.8
VNN3-201ENST00000275223 DLEC1Q9Y238 1755 aa10.05□□□□□ -0.8
VNN3-201ENST00000275223 RIC1Q4ADV7 1423 aa10.05□□□□□ -0.8
VNN3-201ENST00000275223 SNED1Q8TER0 1413 aa10.05□□□□□ -0.8
VNN3-201ENST00000275223 U2AF1L5P0DN76 240 aaPredicted RBP10.04□□□□□ -0.8
VNN3-201ENST00000275223 RGS19P49795 217 aa10.04□□□□□ -0.8
VNN3-201ENST00000275223 SCNN1DP51172 638 aa10.04□□□□□ -0.8
VNN3-201ENST00000275223 U2AF1Q01081 240 aaKnown RBP eCLIP10.04□□□□□ -0.8
VNN3-201ENST00000275223 HLFQ16534 295 aa10.04□□□□□ -0.8
VNN3-201ENST00000275223 LARGE2Q8N3Y3 721 aa10.04□□□□□ -0.8
VNN3-201ENST00000275223 CCER1Q8TC90 406 aaPredicted RBP10.04□□□□□ -0.8
VNN3-201ENST00000275223 RBM17Q96I25 401 aaKnown RBP10.04□□□□□ -0.8
VNN3-201ENST00000275223 CAPNS2Q96L46 248 aa10.04□□□□□ -0.8
VNN3-201ENST00000275223 GPR101Q96P66 508 aaPredicted RBP10.04□□□□□ -0.8
VNN3-201ENST00000275223 MAP3K15Q6ZN16 1313 aa10.04□□□□□ -0.8
VNN3-201ENST00000275223 UBR2Q8IWV8 1755 aa10.03□□□□□ -0.8
VNN3-201ENST00000275223 SCN7AQ01118 1682 aa10.03□□□□□ -0.8
VNN3-201ENST00000275223 SMYD5Q6GMV2 418 aa10.03□□□□□ -0.8
VNN3-201ENST00000275223 POTEHQ6S545 545 aa10.03□□□□□ -0.8
VNN3-201ENST00000275223 KIF6Q6ZMV9 814 aa10.03□□□□□ -0.8
VNN3-201ENST00000275223 TIAM2Q8IVF5 1701 aa10.03□□□□□ -0.8
VNN3-201ENST00000275223 KCNV2Q8TDN2 545 aa10.03□□□□□ -0.8
VNN3-201ENST00000275223 ZC3H15Q8WU90 426 aaKnown RBP10.03□□□□□ -0.8
VNN3-201ENST00000275223 ADARB2Q9NS39 739 aaKnown RBP10.03□□□□□ -0.8
VNN3-201ENST00000275223 GJA3Q9Y6H8 435 aa10.03□□□□□ -0.8
VNN3-201ENST00000275223 TLL2Q9Y6L7 1015 aa10.03□□□□□ -0.8
VNN3-201ENST00000275223 CDHR2Q9BYE9 1310 aa10.03□□□□□ -0.8
VNN3-201ENST00000275223 AFDNP55196 1824 aaKnown RBP10.03□□□□□ -0.8
VNN3-201ENST00000275223 FAM177BA6PVY3 158 aa10.02□□□□□ -0.81
VNN3-201ENST00000275223 NEFMP07197 916 aa10.02□□□□□ -0.81
VNN3-201ENST00000275223 EPS15P42566 896 aa10.02□□□□□ -0.81
VNN3-201ENST00000275223 MLLT1Q03111 559 aaPredicted RBP10.02□□□□□ -0.81
VNN3-201ENST00000275223 PARP10Q53GL7 1025 aa10.02□□□□□ -0.81
VNN3-201ENST00000275223 CST9Q5W186 159 aa10.02□□□□□ -0.81
VNN3-201ENST00000275223 NIM1KQ8IY84 436 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms