RNA–Protein interactions for RNA: ENST00000273048.2

RETREG2-201, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 1 (best)

Gene RETREG2, Length 2,533 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-201ENST00000273048 MAP3K11Q16584 847 aa28.29■■■□□ 2.12
RETREG2-201ENST00000273048 ABTB2Q8N961 1025 aa28.29■■■□□ 2.12
RETREG2-201ENST00000273048 CEMIPQ8WUJ3 1361 aa28.29■■■□□ 2.12
RETREG2-201ENST00000273048 TYRO3Q06418 890 aa28.29■■■□□ 2.12
RETREG2-201ENST00000273048 NMIQ13287 307 aaPredicted RBP28.28■■■□□ 2.12
RETREG2-201ENST00000273048 EVI5LQ96CN4 794 aa28.28■■■□□ 2.12
RETREG2-201ENST00000273048 ATP2B3Q16720 1220 aa28.28■■■□□ 2.12
RETREG2-201ENST00000273048 C9orf78Q9NZ63 289 aaPredicted RBP28.28■■■□□ 2.12
RETREG2-201ENST00000273048 GOLGA6L6A8MZA4 724 aa28.27■■■□□ 2.12
RETREG2-201ENST00000273048 C14orf37Q86TY3 774 aa28.27■■■□□ 2.12
RETREG2-201ENST00000273048 GPATCH3Q96I76 525 aa28.27■■■□□ 2.12
RETREG2-201ENST00000273048 TAF6LQ9Y6J9 622 aa28.27■■■□□ 2.12
RETREG2-201ENST00000273048 TPM3P06753 285 aa28.27■■■□□ 2.12
RETREG2-201ENST00000273048 KCNA6P17658 529 aa28.27■■■□□ 2.12
RETREG2-201ENST00000273048 MTX1Q13505 466 aa28.27■■■□□ 2.12
RETREG2-201ENST00000273048 TFIP11Q9UBB9 837 aaKnown RBP28.27■■■□□ 2.12
RETREG2-201ENST00000273048 DACT1Q9NYF0 836 aa28.26■■■□□ 2.11
RETREG2-201ENST00000273048 MAP3K2Q9Y2U5 619 aa28.26■■■□□ 2.11
RETREG2-201ENST00000273048 FER1L4A9Z1Z3 1794 aa28.26■■■□□ 2.11
RETREG2-201ENST00000273048 SLC27A2O14975 620 aa28.26■■■□□ 2.11
RETREG2-201ENST00000273048 CWF19L2Q2TBE0 894 aaKnown RBP28.26■■■□□ 2.11
RETREG2-201ENST00000273048 MAP4K1Q92918 833 aa28.26■■■□□ 2.11
RETREG2-201ENST00000273048 CHAF1AQ13111 956 aaPredicted RBP28.25■■■□□ 2.11
RETREG2-201ENST00000273048 KLHL34Q8N239 644 aa28.25■■■□□ 2.11
RETREG2-201ENST00000273048 ANO6Q4KMQ2 910 aa28.24■■■□□ 2.11
RETREG2-201ENST00000273048 THEMISQ8N1K5 641 aaPredicted RBP28.24■■■□□ 2.11
RETREG2-201ENST00000273048 CCDC8Q9H0W5 538 aaPredicted RBP28.24■■■□□ 2.11
RETREG2-201ENST00000273048 ZSCAN20P17040 1043 aaPredicted RBP28.24■■■□□ 2.11
RETREG2-201ENST00000273048 PROSER3Q2NL68 480 aa28.24■■■□□ 2.11
RETREG2-201ENST00000273048 TNMDQ9H2S6 317 aa28.24■■■□□ 2.11
RETREG2-201ENST00000273048 LRMPQ12912 555 aa28.23■■■□□ 2.11
RETREG2-201ENST00000273048 STK3Q13188 491 aa28.23■■■□□ 2.11
RETREG2-201ENST00000273048 NBPF6Q5VWK0 638 aa28.23■■■□□ 2.11
RETREG2-201ENST00000273048 NBPF4Q96M43 638 aa28.23■■■□□ 2.11
RETREG2-201ENST00000273048 CBX8Q9HC52 389 aa28.23■■■□□ 2.11
RETREG2-201ENST00000273048 MARF1Q9Y4F3 1742 aaKnown RBP28.23■■■□□ 2.11
RETREG2-201ENST00000273048 A0A0D9SFI3 127 aa28.23■■■□□ 2.11
RETREG2-201ENST00000273048 BTBD11A6QL63 1104 aa28.23■■■□□ 2.11
RETREG2-201ENST00000273048 LARP1Q6PKG0 1096 aaKnown RBP28.23■■■□□ 2.11
RETREG2-201ENST00000273048 CCDC186Q7Z3E2 898 aa28.23■■■□□ 2.11
RETREG2-201ENST00000273048 TLR7Q9NYK1 1049 aaKnown RBP28.23■■■□□ 2.11
RETREG2-201ENST00000273048 NRBP1Q9UHY1 535 aa28.23■■■□□ 2.11
RETREG2-201ENST00000273048 ZHX1Q9UKY1 873 aaPredicted RBP28.23■■■□□ 2.11
RETREG2-201ENST00000273048 HOXB7P09629 217 aa28.22■■■□□ 2.11
RETREG2-201ENST00000273048 EAF2Q96CJ1 260 aaPredicted RBP28.22■■■□□ 2.11
RETREG2-201ENST00000273048 ELP1O95163 1332 aa28.22■■■□□ 2.11
RETREG2-201ENST00000273048 PDCL2Q8N4E4 241 aa28.21■■■□□ 2.11
RETREG2-201ENST00000273048 SPATA32Q96LK8 384 aa28.21■■■□□ 2.11
RETREG2-201ENST00000273048 SETD1BQ9UPS6 1966 aaKnown RBP28.21■■■□□ 2.11
RETREG2-201ENST00000273048 GOLGA6L4A6NEF3 574 aa28.21■■■□□ 2.11
RETREG2-201ENST00000273048 SASH1O94885 1247 aa28.21■■■□□ 2.11
RETREG2-201ENST00000273048 BLOC1S2Q6QNY1 142 aa28.21■■■□□ 2.11
RETREG2-201ENST00000273048 MPRIPQ6WCQ1 1025 aa28.21■■■□□ 2.11
RETREG2-201ENST00000273048 ERC1Q8IUD2 1116 aa28.21■■■□□ 2.11
RETREG2-201ENST00000273048 SPDYE4A6NLX3 237 aa28.2■■■□□ 2.11
RETREG2-201ENST00000273048 PSMA5P28066 241 aa28.2■■■□□ 2.11
RETREG2-201ENST00000273048 TEFQ10587 303 aa28.2■■■□□ 2.11
RETREG2-201ENST00000273048 DRC7Q8IY82 874 aa28.2■■■□□ 2.11
RETREG2-201ENST00000273048 BOLA2Q9H3K6 86 aa28.2■■■□□ 2.11
RETREG2-201ENST00000273048 RBM33Q96EV2 1170 aaKnown RBP28.2■■■□□ 2.1
RETREG2-201ENST00000273048 PDCP20941 246 aa28.19■■■□□ 2.1
RETREG2-201ENST00000273048 DMTNQ08495 405 aa28.19■■■□□ 2.1
RETREG2-201ENST00000273048 TOB2Q14106 344 aaPredicted RBP28.19■■■□□ 2.1
RETREG2-201ENST00000273048 DBF4Q9UBU7 674 aaPredicted RBP28.19■■■□□ 2.1
RETREG2-201ENST00000273048 PRAMEF22A3QJZ6 481 aa28.18■■■□□ 2.1
RETREG2-201ENST00000273048 LEO1Q8WVC0 666 aaPredicted RBP28.18■■■□□ 2.1
RETREG2-201ENST00000273048 MED1Q15648 1581 aaPredicted RBP28.18■■■□□ 2.1
RETREG2-201ENST00000273048 SUCLG2Q96I99 432 aa28.18■■■□□ 2.1
RETREG2-201ENST00000273048 FSD1Q9BTV5 496 aa28.18■■■□□ 2.1
RETREG2-201ENST00000273048 SIL1Q9H173 461 aa28.18■■■□□ 2.1
RETREG2-201ENST00000273048 KDM3BQ7LBC6 1761 aa28.17■■■□□ 2.1
RETREG2-201ENST00000273048 NR1I2O75469 434 aa28.17■■■□□ 2.1
RETREG2-201ENST00000273048 RPS6KB1P23443 525 aa28.17■■■□□ 2.1
RETREG2-201ENST00000273048 TRIM5Q9C035 493 aa28.17■■■□□ 2.1
RETREG2-201ENST00000273048 SCAND2PQ9GZW5 306 aaPredicted RBP28.17■■■□□ 2.1
RETREG2-201ENST00000273048 NPHP4O75161 1426 aaPredicted RBP28.17■■■□□ 2.1
RETREG2-201ENST00000273048 ZNF589Q86UQ0 364 aaPredicted RBP28.17■■■□□ 2.1
RETREG2-201ENST00000273048 KAZALD1Q96I82 304 aa28.17■■■□□ 2.1
RETREG2-201ENST00000273048 C16orf45Q96MC5 204 aaPredicted RBP28.17■■■□□ 2.1
RETREG2-201ENST00000273048 CHD2O14647 1828 aaKnown RBP28.16■■■□□ 2.1
RETREG2-201ENST00000273048 ALDH1L1O75891 902 aa28.16■■■□□ 2.1
RETREG2-201ENST00000273048 ANKRD7Q92527 254 aa28.16■■■□□ 2.1
RETREG2-201ENST00000273048 CTIFO43310 598 aaKnown RBP28.16■■■□□ 2.1
RETREG2-201ENST00000273048 U2AF2P26368 475 aaKnown RBP eCLIP28.16■■■□□ 2.1
RETREG2-201ENST00000273048 KSR2Q6VAB6 950 aa28.16■■■□□ 2.1
RETREG2-201ENST00000273048 BICC1Q9H694 974 aaKnown RBP28.16■■■□□ 2.1
RETREG2-201ENST00000273048 ZNF530Q6P9A1 599 aaPredicted RBP28.15■■■□□ 2.1
RETREG2-201ENST00000273048 CLSTN2Q9H4D0 955 aa28.15■■■□□ 2.1
RETREG2-201ENST00000273048 NPHP3Q7Z494 1330 aa28.15■■■□□ 2.1
RETREG2-201ENST00000273048 HIP1O00291 1037 aa28.15■■■□□ 2.1
RETREG2-201ENST00000273048 ZNF75DP51815 510 aa28.15■■■□□ 2.1
RETREG2-201ENST00000273048 G3BP1Q13283 466 aaKnown RBP eCLIP28.15■■■□□ 2.1
RETREG2-201ENST00000273048 PGBD1Q96JS3 809 aa28.15■■■□□ 2.1
RETREG2-201ENST00000273048 DNAJC25Q9H1X3 360 aa28.15■■■□□ 2.1
RETREG2-201ENST00000273048 JAK2O60674 1132 aa28.14■■■□□ 2.1
RETREG2-201ENST00000273048 KLHDC4Q8TBB5 520 aa28.14■■■□□ 2.1
RETREG2-201ENST00000273048 LRRC59Q96AG4 307 aaKnown RBP28.14■■■□□ 2.1
RETREG2-201ENST00000273048 ANKRD1Q15327 319 aa28.14■■■□□ 2.09
RETREG2-201ENST00000273048 RNF20Q5VTR2 975 aa28.14■■■□□ 2.09
RETREG2-201ENST00000273048 PLA2G4DQ86XP0 818 aa28.14■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms