RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 FCHSD2O94868 740 aa17.98■□□□□ 0.47
UBR3-201ENST00000272793 MX2P20592 715 aa17.98■□□□□ 0.47
UBR3-201ENST00000272793 ALDH3A1P30838 453 aa17.98■□□□□ 0.47
UBR3-201ENST00000272793 GNL1P36915 607 aaPredicted RBP17.98■□□□□ 0.47
UBR3-201ENST00000272793 STX6O43752 255 aa17.98■□□□□ 0.47
UBR3-201ENST00000272793 CASTP20810 708 aaKnown RBP17.98■□□□□ 0.47
UBR3-201ENST00000272793 CCDC40Q4G0X9 1142 aa17.98■□□□□ 0.47
UBR3-201ENST00000272793 CCDC30Q5VVM6 783 aa17.98■□□□□ 0.47
UBR3-201ENST00000272793 TMC6Q7Z403 805 aa17.98■□□□□ 0.47
UBR3-201ENST00000272793 LMNTD2Q8IXW0 634 aa17.98■□□□□ 0.47
UBR3-201ENST00000272793 KIAA1524Q8TCG1 905 aa17.98■□□□□ 0.47
UBR3-201ENST00000272793 VCXQ9H320 206 aa17.98■□□□□ 0.47
UBR3-201ENST00000272793 ERCC6Q03468 1493 aa17.98■□□□□ 0.47
UBR3-201ENST00000272793 INTS8Q75QN2 995 aaKnown RBP17.98■□□□□ 0.47
UBR3-201ENST00000272793 RNF8O76064 485 aa17.98■□□□□ 0.47
UBR3-201ENST00000272793 GNAI2P04899 355 aa17.98■□□□□ 0.47
UBR3-201ENST00000272793 CAPN2P17655 700 aa17.98■□□□□ 0.47
UBR3-201ENST00000272793 RASA3Q14644 834 aa17.98■□□□□ 0.47
UBR3-201ENST00000272793 CNNM3Q8NE01 707 aa17.98■□□□□ 0.47
UBR3-201ENST00000272793 PPP1R12AO14974 1030 aaPredicted RBP17.97■□□□□ 0.47
UBR3-201ENST00000272793 EEF2P13639 858 aaKnown RBP17.97■□□□□ 0.47
UBR3-201ENST00000272793 CCDC144AA2RUR9 1427 aa17.97■□□□□ 0.47
UBR3-201ENST00000272793 ZCRB1Q8TBF4 217 aaKnown RBP17.97■□□□□ 0.47
UBR3-201ENST00000272793 CCDC12Q8WUD4 166 aaPredicted RBP17.97■□□□□ 0.47
UBR3-201ENST00000272793 ATP2A3Q93084 1043 aa17.97■□□□□ 0.47
UBR3-201ENST00000272793 HVCN1Q96D96 273 aa17.97■□□□□ 0.47
UBR3-201ENST00000272793 ZNF287Q9HBT7 754 aa17.97■□□□□ 0.47
UBR3-201ENST00000272793 USP25Q9UHP3 1055 aa17.97■□□□□ 0.47
UBR3-201ENST00000272793 TTC21AQ8NDW8 1320 aa17.97■□□□□ 0.47
UBR3-201ENST00000272793 PRPHP41219 470 aa17.97■□□□□ 0.47
UBR3-201ENST00000272793 GUCY1B3Q02153 619 aa17.97■□□□□ 0.47
UBR3-201ENST00000272793 CKAP2LQ8IYA6 745 aa17.97■□□□□ 0.47
UBR3-201ENST00000272793 CCDC77Q9BR77 488 aa17.97■□□□□ 0.47
UBR3-201ENST00000272793 MINDY4BA8MYZ0 360 aa17.97■□□□□ 0.47
UBR3-201ENST00000272793 RAP1GDS1P52306 607 aa17.97■□□□□ 0.47
UBR3-201ENST00000272793 TMOD2Q9NZR1 351 aa17.97■□□□□ 0.47
UBR3-201ENST00000272793 SPECC1L-ADORA2AF8WAN1 911 aa17.96■□□□□ 0.47
UBR3-201ENST00000272793 EBAG9O00559 213 aa17.96■□□□□ 0.47
UBR3-201ENST00000272793 RIOK3O14730 519 aaKnown RBP17.96■□□□□ 0.47
UBR3-201ENST00000272793 POLR3DP05423 398 aaPredicted RBP17.96■□□□□ 0.47
UBR3-201ENST00000272793 PLCB3Q01970 1234 aa17.96■□□□□ 0.47
UBR3-201ENST00000272793 AKNAQ7Z591 1439 aa17.96■□□□□ 0.47
UBR3-201ENST00000272793 A0A1B0GUA9 196 aa17.96■□□□□ 0.47
UBR3-201ENST00000272793 COG7P83436 770 aa17.96■□□□□ 0.47
UBR3-201ENST00000272793 FMNL3Q8IVF7 1028 aa17.96■□□□□ 0.47
UBR3-201ENST00000272793 EHMT1Q9H9B1 1298 aa17.96■□□□□ 0.47
UBR3-201ENST00000272793 SAMD15Q9P1V8 674 aa17.96■□□□□ 0.47
UBR3-201ENST00000272793 MTUS1Q9ULD2 1270 aa17.96■□□□□ 0.47
UBR3-201ENST00000272793 BCAR3O75815 825 aa17.95■□□□□ 0.46
UBR3-201ENST00000272793 MYL6BP14649 208 aa17.95■□□□□ 0.46
UBR3-201ENST00000272793 ATP2A2P16615 1042 aaKnown RBP17.95■□□□□ 0.46
UBR3-201ENST00000272793 TAF12Q16514 161 aa17.95■□□□□ 0.46
UBR3-201ENST00000272793 SPAG5Q96R06 1193 aa17.95■□□□□ 0.46
UBR3-201ENST00000272793 AFG3L2Q9Y4W6 797 aa17.95■□□□□ 0.46
UBR3-201ENST00000272793 GABPAQ06546 454 aa17.95■□□□□ 0.46
UBR3-201ENST00000272793 BACH2Q9BYV9 841 aa17.95■□□□□ 0.46
UBR3-201ENST00000272793 PHACTR2O75167 634 aa17.95■□□□□ 0.46
UBR3-201ENST00000272793 GNAI3P08754 354 aa17.94■□□□□ 0.46
UBR3-201ENST00000272793 CLNS1AP54105 237 aaKnown RBP17.94■□□□□ 0.46
UBR3-201ENST00000272793 ANKRD24Q8TF21 1146 aa17.94■□□□□ 0.46
UBR3-201ENST00000272793 UBE2Q2Q8WVN8 375 aa17.94■□□□□ 0.46
UBR3-201ENST00000272793 CALML4Q96GE6 196 aa17.94■□□□□ 0.46
UBR3-201ENST00000272793 ABCF2Q9UG63 623 aa17.94■□□□□ 0.46
UBR3-201ENST00000272793 PPP4R4Q6NUP7 873 aa17.94■□□□□ 0.46
UBR3-201ENST00000272793 DDX54Q8TDD1 881 aaKnown RBP17.94■□□□□ 0.46
UBR3-201ENST00000272793 ANLNQ9NQW6 1124 aa17.94■□□□□ 0.46
UBR3-201ENST00000272793 IGSF3O75054 1194 aa17.94■□□□□ 0.46
UBR3-201ENST00000272793 CCDC82Q8N4S0 544 aa17.93■□□□□ 0.46
UBR3-201ENST00000272793 ADAMTS8Q9UP79 889 aa17.93■□□□□ 0.46
UBR3-201ENST00000272793 VPS18Q9P253 973 aa17.93■□□□□ 0.46
UBR3-201ENST00000272793 AK9Q5TCS8 1911 aa17.93■□□□□ 0.46
UBR3-201ENST00000272793 BAG4O95429 457 aaKnown RBP17.93■□□□□ 0.46
UBR3-201ENST00000272793 CCDC183Q5T5S1 534 aa17.93■□□□□ 0.46
UBR3-201ENST00000272793 GGNBP2Q9H3C7 697 aa17.93■□□□□ 0.46
UBR3-201ENST00000272793 ZNF131P52739 623 aa17.93■□□□□ 0.46
UBR3-201ENST00000272793 DBN1Q16643 649 aa17.93■□□□□ 0.46
UBR3-201ENST00000272793 NBPF1Q3BBV0 1214 aa17.93■□□□□ 0.46
UBR3-201ENST00000272793 STXBP4Q6ZWJ1 553 aa17.93■□□□□ 0.46
UBR3-201ENST00000272793 SFMBT1Q9UHJ3 866 aa17.93■□□□□ 0.46
UBR3-201ENST00000272793 KRT222Q8N1A0 295 aa17.92■□□□□ 0.46
UBR3-201ENST00000272793 BIN1O00499 593 aa17.92■□□□□ 0.46
UBR3-201ENST00000272793 ATF3P18847 181 aa17.92■□□□□ 0.46
UBR3-201ENST00000272793 TSR2Q969E8 191 aaKnown RBP17.92■□□□□ 0.46
UBR3-201ENST00000272793 NLRP2Q9NX02 1062 aa17.92■□□□□ 0.46
UBR3-201ENST00000272793 PALM3A6NDB9 673 aaPredicted RBP17.92■□□□□ 0.46
UBR3-201ENST00000272793 FAM212AQ96EL1 285 aa17.92■□□□□ 0.46
UBR3-201ENST00000272793 CDR2Q01850 454 aa17.92■□□□□ 0.46
UBR3-201ENST00000272793 CARMIL1Q5VZK9 1371 aa17.91■□□□□ 0.46
UBR3-201ENST00000272793 A0A087WZG4 1122 aa17.91■□□□□ 0.46
UBR3-201ENST00000272793 ATXN8OSP0DMR3 200 aa17.91■□□□□ 0.46
UBR3-201ENST00000272793 VPS8Q8N3P4 1428 aa17.91■□□□□ 0.46
UBR3-201ENST00000272793 POLD1P28340 1107 aa17.91■□□□□ 0.46
UBR3-201ENST00000272793 GNG11P61952 73 aa17.91■□□□□ 0.46
UBR3-201ENST00000272793 AMPD3Q01432 767 aa17.91■□□□□ 0.46
UBR3-201ENST00000272793 SOGA1O94964 1423 aa17.91■□□□□ 0.46
UBR3-201ENST00000272793 EXOSC9Q06265 439 aaKnown RBP17.91■□□□□ 0.46
UBR3-201ENST00000272793 AACSQ86V21 672 aa17.91■□□□□ 0.46
UBR3-201ENST00000272793 UBLCP1Q8WVY7 318 aaPredicted RBP17.91■□□□□ 0.46
UBR3-201ENST00000272793 JAKMIP2Q96AA8 810 aa17.91■□□□□ 0.46
UBR3-201ENST00000272793 CTNNA3Q9UI47 895 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms