RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 BICC1Q9H694 974 aaKnown RBP15.63■□□□□ 0.09
CPSF6-201ENST00000266679 LMBRD1Q9NUN5 540 aa15.63■□□□□ 0.09
CPSF6-201ENST00000266679 AFDNP55196 1824 aaKnown RBP15.63■□□□□ 0.09
CPSF6-201ENST00000266679 IFIT2P09913 472 aaKnown RBP15.62■□□□□ 0.09
CPSF6-201ENST00000266679 EN1Q05925 392 aaPredicted RBP15.62■□□□□ 0.09
CPSF6-201ENST00000266679 CUL4AQ13619 759 aa15.62■□□□□ 0.09
CPSF6-201ENST00000266679 ERC1Q8IUD2 1116 aa15.62■□□□□ 0.09
CPSF6-201ENST00000266679 IL17RAQ96F46 866 aa15.62■□□□□ 0.09
CPSF6-201ENST00000266679 HDAC5Q9UQL6 1122 aa15.62■□□□□ 0.09
CPSF6-201ENST00000266679 PKD1L3Q7Z443 1732 aa15.62■□□□□ 0.09
CPSF6-201ENST00000266679 KAZALD1Q96I82 304 aa15.62■□□□□ 0.09
CPSF6-201ENST00000266679 LSG1Q9H089 658 aaKnown RBP15.62■□□□□ 0.09
CPSF6-201ENST00000266679 ABCC6O95255 1503 aa15.61■□□□□ 0.09
CPSF6-201ENST00000266679 TRIM37O94972 964 aa15.61■□□□□ 0.09
CPSF6-201ENST00000266679 IGKV5-2P06315 115 aa15.61■□□□□ 0.09
CPSF6-201ENST00000266679 BARGINQ6ZT62 677 aa15.61■□□□□ 0.09
CPSF6-201ENST00000266679 AACSQ86V21 672 aa15.61■□□□□ 0.09
CPSF6-201ENST00000266679 XAGE3Q8WTP9 111 aa15.61■□□□□ 0.09
CPSF6-201ENST00000266679 GPATCH3Q96I76 525 aa15.61■□□□□ 0.09
CPSF6-201ENST00000266679 DIAPH3Q9NSV4 1193 aa15.61■□□□□ 0.09
CPSF6-201ENST00000266679 ECHDC1Q9NTX5 307 aa15.61■□□□□ 0.09
CPSF6-201ENST00000266679 UTYO14607 1347 aa15.6■□□□□ 0.09
CPSF6-201ENST00000266679 EPB41L2O43491 1005 aaKnown RBP15.6■□□□□ 0.09
CPSF6-201ENST00000266679 TOM1L2Q6ZVM7 507 aa15.6■□□□□ 0.09
CPSF6-201ENST00000266679 IFNL2Q8IZJ0 200 aa15.6■□□□□ 0.09
CPSF6-201ENST00000266679 SNX14Q9Y5W7 946 aa15.6■□□□□ 0.09
CPSF6-201ENST00000266679 MRC1P22897 1456 aa15.6■□□□□ 0.09
CPSF6-201ENST00000266679 PRPF40AO75400 957 aaKnown RBP15.6■□□□□ 0.09
CPSF6-201ENST00000266679 CAVIN1Q6NZI2 390 aaKnown RBP15.6■□□□□ 0.09
CPSF6-201ENST00000266679 ZNF496Q96IT1 587 aaPredicted RBP15.6■□□□□ 0.09
CPSF6-201ENST00000266679 MYD88Q99836 296 aa15.6■□□□□ 0.09
CPSF6-201ENST00000266679 RRAGDQ9NQL2 400 aaPredicted RBP15.6■□□□□ 0.09
CPSF6-201ENST00000266679 BAG6P46379 1132 aa15.59■□□□□ 0.09
CPSF6-201ENST00000266679 PIP4K2AP48426 406 aaPredicted RBP15.59■□□□□ 0.09
CPSF6-201ENST00000266679 KIAA1211Q6ZU35 1233 aa15.59■□□□□ 0.09
CPSF6-201ENST00000266679 ARFGEF2Q9Y6D5 1785 aa15.59■□□□□ 0.09
CPSF6-201ENST00000266679 NEXNQ0ZGT2 675 aa15.59■□□□□ 0.09
CPSF6-201ENST00000266679 G3BP1Q13283 466 aaKnown RBP eCLIP15.59■□□□□ 0.09
CPSF6-201ENST00000266679 COPS6Q7L5N1 327 aa15.59■□□□□ 0.09
CPSF6-201ENST00000266679 SIL1Q9H173 461 aa15.59■□□□□ 0.09
CPSF6-201ENST00000266679 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.59■□□□□ 0.09
CPSF6-201ENST00000266679 SBF2Q86WG5 1849 aa15.59■□□□□ 0.09
CPSF6-201ENST00000266679 LAMB4A4D0S4 1761 aa15.58■□□□□ 0.09
CPSF6-201ENST00000266679 PSDA5PKW4 1024 aaPredicted RBP15.58■□□□□ 0.08
CPSF6-201ENST00000266679 NEURL1BA8MQ27 555 aa15.58■□□□□ 0.08
CPSF6-201ENST00000266679 SASH1O94885 1247 aa15.58■□□□□ 0.08
CPSF6-201ENST00000266679 TTC5Q8N0Z6 440 aa15.58■□□□□ 0.08
CPSF6-201ENST00000266679 INTS4Q96HW7 963 aaKnown RBP15.58■□□□□ 0.08
CPSF6-201ENST00000266679 WDR17Q8IZU2 1322 aa15.58■□□□□ 0.08
CPSF6-201ENST00000266679 CYP27B1O15528 508 aa15.58■□□□□ 0.08
CPSF6-201ENST00000266679 RASEFQ8IZ41 740 aa15.58■□□□□ 0.08
CPSF6-201ENST00000266679 CCDC8Q9H0W5 538 aaPredicted RBP15.58■□□□□ 0.08
CPSF6-201ENST00000266679 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.58■□□□□ 0.082e-8■■■□□ 17.9
CPSF6-201ENST00000266679 BRD1O95696 1058 aa15.57■□□□□ 0.08
CPSF6-201ENST00000266679 KLHDC4Q8TBB5 520 aa15.57■□□□□ 0.08
CPSF6-201ENST00000266679 GPT2Q8TD30 523 aa15.57■□□□□ 0.08
CPSF6-201ENST00000266679 RUFY2Q8WXA3 655 aa15.57■□□□□ 0.08
CPSF6-201ENST00000266679 USP16Q9Y5T5 823 aa15.57■□□□□ 0.08
CPSF6-201ENST00000266679 EZH2Q15910 746 aaKnown RBP15.56■□□□□ 0.08
CPSF6-201ENST00000266679 JARID2Q92833 1246 aaPredicted RBP15.56■□□□□ 0.08
CPSF6-201ENST00000266679 DCAF5Q96JK2 942 aa15.56■□□□□ 0.08
CPSF6-201ENST00000266679 METTL22Q9BUU2 404 aaPredicted RBP15.56■□□□□ 0.08
CPSF6-201ENST00000266679 TLR7Q9NYK1 1049 aaKnown RBP15.56■□□□□ 0.08
CPSF6-201ENST00000266679 RBM27Q9P2N5 1060 aaKnown RBP15.56■□□□□ 0.08
CPSF6-201ENST00000266679 PTH1RQ03431 593 aa15.56■□□□□ 0.08
CPSF6-201ENST00000266679 GCKRQ14397 625 aa15.56■□□□□ 0.08
CPSF6-201ENST00000266679 ZSCAN23Q3MJ62 389 aa15.56■□□□□ 0.08
CPSF6-201ENST00000266679 EPHA10Q5JZY3 1008 aa15.56■□□□□ 0.08
CPSF6-201ENST00000266679 FAM196AQ6ZSG2 479 aa15.56■□□□□ 0.08
CPSF6-201ENST00000266679 EAF2Q96CJ1 260 aaPredicted RBP15.56■□□□□ 0.08
CPSF6-201ENST00000266679 THRAP3Q9Y2W1 955 aaKnown RBP15.56■□□□□ 0.08
CPSF6-201ENST00000266679 SNRPA1P09661 255 aaKnown RBP15.55■□□□□ 0.08
CPSF6-201ENST00000266679 EVI5LQ96CN4 794 aa15.55■□□□□ 0.08
CPSF6-201ENST00000266679 LARP6Q9BRS8 491 aaKnown RBP15.55■□□□□ 0.08
CPSF6-201ENST00000266679 CPA1P15085 419 aa15.55■□□□□ 0.08
CPSF6-201ENST00000266679 TTC14Q96N46 770 aa15.55■□□□□ 0.08
CPSF6-201ENST00000266679 FMNL2Q96PY5 1086 aa15.55■□□□□ 0.08
CPSF6-201ENST00000266679 RREB1Q92766 1687 aa15.55■□□□□ 0.08
CPSF6-201ENST00000266679 NUP188Q5SRE5 1749 aa15.54■□□□□ 0.08
CPSF6-201ENST00000266679 AK2P54819 239 aa15.54■□□□□ 0.08
CPSF6-201ENST00000266679 CABP4P57796 275 aa15.54■□□□□ 0.08
CPSF6-201ENST00000266679 DISP2A7MBM2 1401 aa15.54■□□□□ 0.08
CPSF6-201ENST00000266679 APBA3O96018 575 aa15.53■□□□□ 0.08
CPSF6-201ENST00000266679 CASTP20810 708 aaKnown RBP15.53■□□□□ 0.08
CPSF6-201ENST00000266679 ZNF445P59923 1031 aa15.53■□□□□ 0.08
CPSF6-201ENST00000266679 PRPF40BQ6NWY9 871 aaKnown RBP15.53■□□□□ 0.08
CPSF6-201ENST00000266679 ANKRD13DQ6ZTN6 518 aa15.53■□□□□ 0.08
CPSF6-201ENST00000266679 LRP10Q7Z4F1 713 aa15.53■□□□□ 0.08
CPSF6-201ENST00000266679 FOXD4L6Q3SYB3 417 aaPredicted RBP15.53■□□□□ 0.08
CPSF6-201ENST00000266679 FOXD4L3Q6VB84 417 aaPredicted RBP15.53■□□□□ 0.08
CPSF6-201ENST00000266679 RPAP1Q9BWH6 1393 aaPredicted RBP15.53■□□□□ 0.08
CPSF6-201ENST00000266679 NASPP49321 788 aaPredicted RBP15.52■□□□□ 0.08
CPSF6-201ENST00000266679 NMIQ13287 307 aaPredicted RBP15.52■□□□□ 0.08
CPSF6-201ENST00000266679 DDB1Q16531 1140 aa15.52■□□□□ 0.08
CPSF6-201ENST00000266679 RUFY3Q7L099 469 aa15.52■□□□□ 0.08
CPSF6-201ENST00000266679 PTF1AQ7RTS3 328 aa15.52■□□□□ 0.08
CPSF6-201ENST00000266679 FAM227BQ96M60 508 aa15.52■□□□□ 0.08
CPSF6-201ENST00000266679 BOLA2Q9H3K6 86 aa15.52■□□□□ 0.08
CPSF6-201ENST00000266679 NSFL1CQ9UNZ2 370 aaKnown RBP15.52■□□□□ 0.08
CPSF6-201ENST00000266679 JAKMIP1Q96N16 626 aaKnown RBP15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms