RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 OFD1O75665 1012 aa15.45■□□□□ 0.06
PRPF6-201ENST00000266079 ZSCAN30Q86W11 494 aa15.45■□□□□ 0.06
PRPF6-201ENST00000266079 PLBD2Q8NHP8 589 aa15.45■□□□□ 0.06
PRPF6-201ENST00000266079 APBB1O00213 710 aa15.44■□□□□ 0.06
PRPF6-201ENST00000266079 METTL22Q9BUU2 404 aaPredicted RBP15.44■□□□□ 0.06
PRPF6-201ENST00000266079 LRRFIP2Q9Y608 721 aaKnown RBP15.44■□□□□ 0.06
PRPF6-201ENST00000266079 UBTFL1P0CB47 393 aaPredicted RBP15.43■□□□□ 0.06
PRPF6-201ENST00000266079 TERF1P54274 439 aa15.43■□□□□ 0.06
PRPF6-201ENST00000266079 RAB3GAP1Q15042 981 aa15.43■□□□□ 0.06
PRPF6-201ENST00000266079 PROM2Q8N271 834 aa15.43■□□□□ 0.06
PRPF6-201ENST00000266079 SBF2Q86WG5 1849 aa15.43■□□□□ 0.06
PRPF6-201ENST00000266079 CACNA1FO60840 1977 aa15.43■□□□□ 0.06
PRPF6-201ENST00000266079 MYH14Q7Z406 1995 aaKnown RBP15.43■□□□□ 0.06
PRPF6-201ENST00000266079 TXNRD1Q16881 649 aa15.43■□□□□ 0.06
PRPF6-201ENST00000266079 LINS1Q8NG48 757 aa15.43■□□□□ 0.06
PRPF6-201ENST00000266079 IL6STP40189 918 aaPredicted RBP15.43■□□□□ 0.06
PRPF6-201ENST00000266079 RBM25P49756 843 aaKnown RBP15.43■□□□□ 0.06
PRPF6-201ENST00000266079 EIF5P55010 431 aaKnown RBP15.43■□□□□ 0.06
PRPF6-201ENST00000266079 BICDL1Q6ZP65 573 aa15.43■□□□□ 0.06
PRPF6-201ENST00000266079 NHSQ6T4R5 1651 aa15.43■□□□□ 0.06
PRPF6-201ENST00000266079 NEURL1BA8MQ27 555 aa15.42■□□□□ 0.06
PRPF6-201ENST00000266079 LAMB4A4D0S4 1761 aa15.42■□□□□ 0.06
PRPF6-201ENST00000266079 EN1Q05925 392 aaPredicted RBP15.42■□□□□ 0.06
PRPF6-201ENST00000266079 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.42■□□□□ 0.06
PRPF6-201ENST00000266079 UBE3BQ7Z3V4 1068 aa15.42■□□□□ 0.06
PRPF6-201ENST00000266079 AK7Q96M32 723 aa15.42■□□□□ 0.06
PRPF6-201ENST00000266079 SRP68Q9UHB9 627 aaKnown RBP15.42■□□□□ 0.06
PRPF6-201ENST00000266079 TJP1Q07157 1748 aa15.41■□□□□ 0.06
PRPF6-201ENST00000266079 A0A087WZG4 1122 aa15.41■□□□□ 0.06
PRPF6-201ENST00000266079 DEFB132Q7Z7B7 95 aa15.41■□□□□ 0.06
PRPF6-201ENST00000266079 SIRT2Q8IXJ6 389 aa15.41■□□□□ 0.06
PRPF6-201ENST00000266079 NASPP49321 788 aaPredicted RBP15.41■□□□□ 0.06
PRPF6-201ENST00000266079 SYNE4Q8N205 404 aa15.41■□□□□ 0.06
PRPF6-201ENST00000266079 MAP3K15Q6ZN16 1313 aa15.4■□□□□ 0.06
PRPF6-201ENST00000266079 GNAI2P04899 355 aa15.4■□□□□ 0.06
PRPF6-201ENST00000266079 GRM8O00222 908 aa15.4■□□□□ 0.06
PRPF6-201ENST00000266079 HDAC1Q13547 482 aaPredicted RBP15.4■□□□□ 0.06
PRPF6-201ENST00000266079 GCKRQ14397 625 aa15.4■□□□□ 0.06
PRPF6-201ENST00000266079 ANP32BQ92688 251 aaKnown RBP15.4■□□□□ 0.06
PRPF6-201ENST00000266079 GNAI3P08754 354 aa15.39■□□□□ 0.05
PRPF6-201ENST00000266079 CCDC85AQ96PX6 553 aaPredicted RBP15.39■□□□□ 0.05
PRPF6-201ENST00000266079 MAP7D2Q96T17 732 aa15.39■□□□□ 0.05
PRPF6-201ENST00000266079 RTCBQ9Y3I0 505 aaKnown RBP15.39■□□□□ 0.05
PRPF6-201ENST00000266079 COL15A1P39059 1388 aa15.39■□□□□ 0.05
PRPF6-201ENST00000266079 MSNP26038 577 aaKnown RBP15.39■□□□□ 0.05
PRPF6-201ENST00000266079 PRDM4Q9UKN5 801 aa15.39■□□□□ 0.05
PRPF6-201ENST00000266079 PNMA6EA0A0J9YXQ4 647 aa15.38■□□□□ 0.05
PRPF6-201ENST00000266079 EZH2Q15910 746 aaKnown RBP15.38■□□□□ 0.05
PRPF6-201ENST00000266079 CEP85Q6P2H3 762 aa15.38■□□□□ 0.05
PRPF6-201ENST00000266079 FAM89AQ96GI7 184 aa15.38■□□□□ 0.05
PRPF6-201ENST00000266079 USPL1Q5W0Q7 1092 aa15.38■□□□□ 0.05
PRPF6-201ENST00000266079 SUCLG2Q96I99 432 aa15.38■□□□□ 0.05
PRPF6-201ENST00000266079 ALDH1L1O75891 902 aa15.38■□□□□ 0.05
PRPF6-201ENST00000266079 TCIRG1Q13488 830 aa15.38■□□□□ 0.05
PRPF6-201ENST00000266079 GIGYF2Q6Y7W6 1299 aaKnown RBP15.38■□□□□ 0.05
PRPF6-201ENST00000266079 CHMP4BQ9H444 224 aaKnown RBP15.38■□□□□ 0.05
PRPF6-201ENST00000266079 IBTKQ9P2D0 1353 aaPredicted RBP15.38■□□□□ 0.05
PRPF6-201ENST00000266079 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.37■□□□□ 0.05
PRPF6-201ENST00000266079 ARHGEF1Q92888 912 aaKnown RBP15.37■□□□□ 0.05
PRPF6-201ENST00000266079 CWC25Q9NXE8 425 aaPredicted RBP15.37■□□□□ 0.05
PRPF6-201ENST00000266079 CHMP3Q9Y3E7 222 aa15.37■□□□□ 0.05
PRPF6-201ENST00000266079 RBM10P98175 930 aaKnown RBP15.37■□□□□ 0.05
PRPF6-201ENST00000266079 CCDC24Q8N4L8 307 aa15.37■□□□□ 0.05
PRPF6-201ENST00000266079 RPS6KA4O75676 772 aa15.36■□□□□ 0.05
PRPF6-201ENST00000266079 CAMTA2O94983 1202 aa15.36■□□□□ 0.05
PRPF6-201ENST00000266079 EPHA10Q5JZY3 1008 aa15.36■□□□□ 0.05
PRPF6-201ENST00000266079 CNTNAP4Q9C0A0 1308 aa15.36■□□□□ 0.05
PRPF6-201ENST00000266079 BICC1Q9H694 974 aaKnown RBP15.36■□□□□ 0.05
PRPF6-201ENST00000266079 TFCP2L1Q9NZI6 479 aa15.36■□□□□ 0.05
PRPF6-201ENST00000266079 NIP7Q9Y221 180 aaKnown RBP eCLIP15.36■□□□□ 0.05
PRPF6-201ENST00000266079 RFC4P35249 363 aa15.35■□□□□ 0.05
PRPF6-201ENST00000266079 SF3B2Q13435 895 aaKnown RBP15.35■□□□□ 0.05
PRPF6-201ENST00000266079 EXOC6BQ9Y2D4 811 aa15.35■□□□□ 0.05
PRPF6-201ENST00000266079 SRGAP3O43295 1099 aa15.35■□□□□ 0.05
PRPF6-201ENST00000266079 ZPR1O75312 459 aa15.35■□□□□ 0.05
PRPF6-201ENST00000266079 ZNF827Q17R98 1081 aa15.35■□□□□ 0.05
PRPF6-201ENST00000266079 PPP1R42Q7Z4L9 355 aa15.35■□□□□ 0.05
PRPF6-201ENST00000266079 ATP10DQ9P241 1426 aa15.35■□□□□ 0.05
PRPF6-201ENST00000266079 GOLGA6L22H0YM25 854 aa15.35■□□□□ 0.05
PRPF6-201ENST00000266079 HS1BP3Q53T59 392 aa15.35■□□□□ 0.05
PRPF6-201ENST00000266079 TRAPPC3LQ5T215 181 aa15.35■□□□□ 0.05
PRPF6-201ENST00000266079 TRMT112Q9UI30 125 aaKnown RBP15.35■□□□□ 0.05
PRPF6-201ENST00000266079 UBN2Q6ZU65 1347 aa15.34■□□□□ 0.05
PRPF6-201ENST00000266079 PXDNLA1KZ92 1463 aa15.34■□□□□ 0.05
PRPF6-201ENST00000266079 KLHL40Q2TBA0 621 aa15.34■□□□□ 0.05
PRPF6-201ENST00000266079 NUTM1Q86Y26 1132 aa15.34■□□□□ 0.05
PRPF6-201ENST00000266079 ANKRD44Q8N8A2 993 aa15.34■□□□□ 0.05
PRPF6-201ENST00000266079 KLHDC4Q8TBB5 520 aa15.34■□□□□ 0.05
PRPF6-201ENST00000266079 KAZALD1Q96I82 304 aa15.34■□□□□ 0.05
PRPF6-201ENST00000266079 SLC27A3Q5K4L6 730 aa15.34■□□□□ 0.05
PRPF6-201ENST00000266079 CLEC17AQ6ZS10 378 aa15.34■□□□□ 0.05
PRPF6-201ENST00000266079 PODXL2Q9NZ53 605 aa15.34■□□□□ 0.05
PRPF6-201ENST00000266079 NLRP10Q86W26 655 aa15.33■□□□□ 0.05
PRPF6-201ENST00000266079 ISCA1Q9BUE6 129 aa15.33■□□□□ 0.05
PRPF6-201ENST00000266079 R3HCC1Q9Y3T6 440 aaKnown RBP15.33■□□□□ 0.05
PRPF6-201ENST00000266079 ARFGEF2Q9Y6D5 1785 aa15.33■□□□□ 0.04
PRPF6-201ENST00000266079 PLSCR1O15162 318 aa15.33■□□□□ 0.04
PRPF6-201ENST00000266079 RC3H1Q5TC82 1133 aaKnown RBP15.33■□□□□ 0.04
PRPF6-201ENST00000266079 PA2G4Q9UQ80 394 aaKnown RBP15.33■□□□□ 0.04
PRPF6-201ENST00000266079 ANKRD45Q5TZF3 282 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms