RNA–Protein interactions for RNA: ENST00000263212.9

PPM1F-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PPM1F, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-201ENST00000263212 KCNG4Q8TDN1 519 aa17.04■□□□□ 0.32
PPM1F-201ENST00000263212 CTTNBP2Q8WZ74 1663 aa17.04■□□□□ 0.32
PPM1F-201ENST00000263212 USO1O60763 962 aaKnown RBP17.04■□□□□ 0.32
PPM1F-201ENST00000263212 FGFR1OPO95684 399 aaKnown RBP17.04■□□□□ 0.32
PPM1F-201ENST00000263212 TUBB4AP04350 444 aa17.04■□□□□ 0.32
PPM1F-201ENST00000263212 NUP88Q99567 741 aaPredicted RBP17.04■□□□□ 0.32
PPM1F-201ENST00000263212 DNM1Q05193 864 aaKnown RBP17.03■□□□□ 0.32
PPM1F-201ENST00000263212 PYM1Q9BRP8 204 aaKnown RBP17.03■□□□□ 0.32
PPM1F-201ENST00000263212 TTC41PQ6P2S7 1318 aa17.03■□□□□ 0.32
PPM1F-201ENST00000263212 POLR3DP05423 398 aaPredicted RBP17.03■□□□□ 0.32
PPM1F-201ENST00000263212 SLC5A1P13866 664 aa17.03■□□□□ 0.32
PPM1F-201ENST00000263212 UBE3BQ7Z3V4 1068 aa17.03■□□□□ 0.32
PPM1F-201ENST00000263212 PAFAH1B1P43034 410 aa17.03■□□□□ 0.32
PPM1F-201ENST00000263212 KRT222Q8N1A0 295 aa17.03■□□□□ 0.32
PPM1F-201ENST00000263212 TSPYL6Q8N831 410 aa17.03■□□□□ 0.32
PPM1F-201ENST00000263212 CPLX3Q8WVH0 158 aa17.03■□□□□ 0.32
PPM1F-201ENST00000263212 SYCP2Q9BX26 1530 aa17.03■□□□□ 0.32
PPM1F-201ENST00000263212 NPHP3Q7Z494 1330 aa17.03■□□□□ 0.32
PPM1F-201ENST00000263212 ZGPATQ8N5A5 531 aaKnown RBP17.03■□□□□ 0.32
PPM1F-201ENST00000263212 TTC12Q9H892 705 aaPredicted RBP17.03■□□□□ 0.32
PPM1F-201ENST00000263212 ANKRD18BA2A2Z9 1011 aa17.02■□□□□ 0.32
PPM1F-201ENST00000263212 CAVIN4Q5BKX8 364 aa17.02■□□□□ 0.32
PPM1F-201ENST00000263212 CCDC82Q8N4S0 544 aa17.02■□□□□ 0.32
PPM1F-201ENST00000263212 TMOD3Q9NYL9 352 aa17.02■□□□□ 0.32
PPM1F-201ENST00000263212 ZFYVE9O95405 1425 aa17.02■□□□□ 0.32
PPM1F-201ENST00000263212 ZBTB7BO15156 539 aaPredicted RBP17.02■□□□□ 0.32
PPM1F-201ENST00000263212 MRPS27Q92552 414 aaKnown RBP17.02■□□□□ 0.32
PPM1F-201ENST00000263212 SPDYE4A6NLX3 237 aa17.02■□□□□ 0.31
PPM1F-201ENST00000263212 NEFHP12036 1026 aa17.02■□□□□ 0.31
PPM1F-201ENST00000263212 METAP2P50579 478 aaKnown RBP eCLIP17.02■□□□□ 0.316e-7■■■□□ 16.8
PPM1F-201ENST00000263212 CWC25Q9NXE8 425 aaPredicted RBP17.02■□□□□ 0.31
PPM1F-201ENST00000263212 GNG11P61952 73 aa17.01■□□□□ 0.31
PPM1F-201ENST00000263212 CACNA2D4Q7Z3S7 1137 aa17.01■□□□□ 0.31
PPM1F-201ENST00000263212 TSG101Q99816 390 aa17.01■□□□□ 0.31
PPM1F-201ENST00000263212 SYKP43405 635 aa17.01■□□□□ 0.31
PPM1F-201ENST00000263212 TMEM67Q5HYA8 995 aa17.01■□□□□ 0.31
PPM1F-201ENST00000263212 TEX14Q8IWB6 1497 aa17.01■□□□□ 0.31
PPM1F-201ENST00000263212 ZFYP08048 801 aaPredicted RBP17.01■□□□□ 0.31
PPM1F-201ENST00000263212 TYRO3Q06418 890 aa17.01■□□□□ 0.31
PPM1F-201ENST00000263212 RAB34Q9BZG1 259 aa17.01■□□□□ 0.31
PPM1F-201ENST00000263212 ZMYND15Q9H091 742 aa17.01■□□□□ 0.31
PPM1F-201ENST00000263212 FAM107BQ9H098 131 aa17.01■□□□□ 0.31
PPM1F-201ENST00000263212 EIF4A2Q14240 407 aaKnown RBP17■□□□□ 0.31
PPM1F-201ENST00000263212 MEX3CQ5U5Q3 659 aaKnown RBP17■□□□□ 0.31
PPM1F-201ENST00000263212 CATIPQ7Z7H3 387 aa17■□□□□ 0.31
PPM1F-201ENST00000263212 SEC63Q9UGP8 760 aaKnown RBP17■□□□□ 0.31
PPM1F-201ENST00000263212 RANBP6O60518 1105 aaKnown RBP17■□□□□ 0.31
PPM1F-201ENST00000263212 CHMLP26374 656 aa17■□□□□ 0.31
PPM1F-201ENST00000263212 CHPF2Q9P2E5 772 aa17■□□□□ 0.31
PPM1F-201ENST00000263212 IFNL2Q8IZJ0 200 aa17■□□□□ 0.31
PPM1F-201ENST00000263212 CCDC194A0A1B0GVG4 234 aa17■□□□□ 0.31
PPM1F-201ENST00000263212 PPP1R12BO60237 982 aaPredicted RBP17■□□□□ 0.31
PPM1F-201ENST00000263212 ANXA1P04083 346 aa17■□□□□ 0.31
PPM1F-201ENST00000263212 AK2P54819 239 aa17■□□□□ 0.31
PPM1F-201ENST00000263212 UBASH3AP57075 661 aa17■□□□□ 0.31
PPM1F-201ENST00000263212 TAX1BP1Q86VP1 789 aa17■□□□□ 0.31
PPM1F-201ENST00000263212 ZNF652Q9Y2D9 606 aa17■□□□□ 0.31
PPM1F-201ENST00000263212 WDR62O43379 1518 aa17■□□□□ 0.31
PPM1F-201ENST00000263212 SEPT7Q16181 437 aaKnown RBP16.99■□□□□ 0.31
PPM1F-201ENST00000263212 ANKRD13DQ6ZTN6 518 aa16.99■□□□□ 0.31
PPM1F-201ENST00000263212 HAND2P61296 217 aa16.99■□□□□ 0.31
PPM1F-201ENST00000263212 MCMDC2Q4G0Z9 681 aa16.99■□□□□ 0.31
PPM1F-201ENST00000263212 MICU3Q86XE3 530 aa16.99■□□□□ 0.31
PPM1F-201ENST00000263212 TCEANC2Q96MN5 208 aa16.99■□□□□ 0.31
PPM1F-201ENST00000263212 DNAJC25Q9H1X3 360 aa16.99■□□□□ 0.31
PPM1F-201ENST00000263212 MKNK2Q9HBH9 465 aa16.99■□□□□ 0.31
PPM1F-201ENST00000263212 BLMP54132 1417 aaPredicted RBP16.99■□□□□ 0.31
PPM1F-201ENST00000263212 KLF18A0A0U1RQI7 1052 aa16.99■□□□□ 0.31
PPM1F-201ENST00000263212 GRM8O00222 908 aa16.99■□□□□ 0.31
PPM1F-201ENST00000263212 SNRPA1P09661 255 aaKnown RBP16.99■□□□□ 0.31
PPM1F-201ENST00000263212 NLRP5P59047 1200 aa16.99■□□□□ 0.31
PPM1F-201ENST00000263212 SEPT11Q9NVA2 429 aaKnown RBP16.99■□□□□ 0.31
PPM1F-201ENST00000263212 TRMT112Q9UI30 125 aaKnown RBP16.99■□□□□ 0.31
PPM1F-201ENST00000263212 GTF2F1P35269 517 aaKnown RBP eCLIP16.99■□□□□ 0.318e-8■■■■□ 21.7
PPM1F-201ENST00000263212 KSR2Q6VAB6 950 aa16.99■□□□□ 0.31
PPM1F-201ENST00000263212 DDX46Q7L014 1031 aaKnown RBP16.99■□□□□ 0.31
PPM1F-201ENST00000263212 VPS36Q86VN1 386 aa16.99■□□□□ 0.31
PPM1F-201ENST00000263212 SNRKQ9NRH2 765 aa16.99■□□□□ 0.31
PPM1F-201ENST00000263212 FOXO3O43524 673 aa16.98■□□□□ 0.31
PPM1F-201ENST00000263212 CCDC12Q8WUD4 166 aaPredicted RBP16.98■□□□□ 0.31
PPM1F-201ENST00000263212 SMARCC1Q92922 1105 aaPredicted RBP16.98■□□□□ 0.31
PPM1F-201ENST00000263212 PPIP5K1Q6PFW1 1433 aa16.98■□□□□ 0.31
PPM1F-201ENST00000263212 KIF20AO95235 890 aa16.98■□□□□ 0.31
PPM1F-201ENST00000263212 LDHAL6AQ6ZMR3 332 aa16.98■□□□□ 0.31
PPM1F-201ENST00000263212 ATP5J2-PTCD1G3V325 749 aa16.98■□□□□ 0.31
PPM1F-201ENST00000263212 USP5P45974 858 aa16.98■□□□□ 0.31
PPM1F-201ENST00000263212 SRRTQ9BXP5 876 aaKnown RBP16.98■□□□□ 0.31
PPM1F-201ENST00000263212 ZBTB3Q9H5J0 574 aa16.98■□□□□ 0.31
PPM1F-201ENST00000263212 SOS1Q07889 1333 aaPredicted RBP16.98■□□□□ 0.31
PPM1F-201ENST00000263212 DNMT1P26358 1616 aaKnown RBP16.97■□□□□ 0.31
PPM1F-201ENST00000263212 LUZP1Q86V48 1076 aa16.97■□□□□ 0.31
PPM1F-201ENST00000263212 ZHX1Q9UKY1 873 aaPredicted RBP16.97■□□□□ 0.31
PPM1F-201ENST00000263212 A2MP01023 1474 aa16.97■□□□□ 0.31
PPM1F-201ENST00000263212 Q6ZUG5 572 aa16.97■□□□□ 0.31
PPM1F-201ENST00000263212 PHACTR3Q96KR7 559 aa16.97■□□□□ 0.31
PPM1F-201ENST00000263212 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.97■□□□□ 0.311e-6■■■■■ 179.2
PPM1F-201ENST00000263212 SLU7O95391 586 aaKnown RBP16.97■□□□□ 0.31
PPM1F-201ENST00000263212 ISM2Q6H9L7 571 aa16.97■□□□□ 0.31
PPM1F-201ENST00000263212 TEX13AQ9BXU3 409 aaPredicted RBP16.97■□□□□ 0.31
PPM1F-201ENST00000263212 BMP15O95972 392 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms