RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 BRF1Q92994 677 aa13.89□□□□□ -0.19
SMG6-201ENST00000263073 FLIIQ13045 1269 aa13.89□□□□□ -0.19
SMG6-201ENST00000263073 UVSSAQ2YD98 709 aa13.89□□□□□ -0.19
SMG6-201ENST00000263073 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.89□□□□□ -0.195e-9■■■■■ 28.9
SMG6-201ENST00000263073 VPS18Q9P253 973 aa13.89□□□□□ -0.19
SMG6-201ENST00000263073 SYNJ2O15056 1496 aa13.88□□□□□ -0.19
SMG6-201ENST00000263073 EHBP1L1Q8N3D4 1523 aa13.88□□□□□ -0.19
SMG6-201ENST00000263073 LARP1Q6PKG0 1096 aaKnown RBP13.88□□□□□ -0.19
SMG6-201ENST00000263073 CUL7Q14999 1698 aa13.88□□□□□ -0.19
SMG6-201ENST00000263073 CHST3Q7LGC8 479 aa13.88□□□□□ -0.19
SMG6-201ENST00000263073 ZNF526Q8TF50 670 aaPredicted RBP13.88□□□□□ -0.19
SMG6-201ENST00000263073 ALS2CR12Q96Q35 445 aa13.88□□□□□ -0.19
SMG6-201ENST00000263073 DISP3Q9P2K9 1392 aa13.88□□□□□ -0.19
SMG6-201ENST00000263073 ABCA10Q8WWZ4 1543 aa13.88□□□□□ -0.19
SMG6-201ENST00000263073 SMC1AQ14683 1233 aaKnown RBP13.88□□□□□ -0.19
SMG6-201ENST00000263073 DDX46Q7L014 1031 aaKnown RBP13.88□□□□□ -0.19
SMG6-201ENST00000263073 TTC16Q8NEE8 873 aa13.88□□□□□ -0.19
SMG6-201ENST00000263073 EVI5LQ96CN4 794 aa13.88□□□□□ -0.19
SMG6-201ENST00000263073 MEIS3Q99687 375 aa13.88□□□□□ -0.19
SMG6-201ENST00000263073 PAIP2Q9BPZ3 127 aaKnown RBP13.88□□□□□ -0.19
SMG6-201ENST00000263073 GPTP24298 496 aa13.88□□□□□ -0.19
SMG6-201ENST00000263073 TMEM67Q5HYA8 995 aa13.88□□□□□ -0.19
SMG6-201ENST00000263073 N4BP3O15049 544 aa13.87□□□□□ -0.19
SMG6-201ENST00000263073 CCDC40Q4G0X9 1142 aa13.87□□□□□ -0.19
SMG6-201ENST00000263073 C10orf67Q8IYJ2 551 aa13.87□□□□□ -0.19
SMG6-201ENST00000263073 CCDC150Q8NCX0 1101 aa13.87□□□□□ -0.19
SMG6-201ENST00000263073 CDK13Q14004 1512 aaKnown RBP13.87□□□□□ -0.19
SMG6-201ENST00000263073 GCOM1H8Y6P7 765 aaPredicted RBP13.87□□□□□ -0.19
SMG6-201ENST00000263073 MYZAPP0CAP1 466 aa13.87□□□□□ -0.19
SMG6-201ENST00000263073 CTCFLQ8NI51 663 aaPredicted RBP13.87□□□□□ -0.19
SMG6-201ENST00000263073 HSF2BPO75031 334 aa13.87□□□□□ -0.19
SMG6-201ENST00000263073 RHOXF2BP0C7M4 288 aa13.87□□□□□ -0.19
SMG6-201ENST00000263073 LMOD1P29536 600 aaPredicted RBP13.87□□□□□ -0.19
SMG6-201ENST00000263073 RHOXF2Q9BQY4 288 aa13.87□□□□□ -0.19
SMG6-201ENST00000263073 SYT1P21579 422 aa13.87□□□□□ -0.19
SMG6-201ENST00000263073 ANAPC15P60006 121 aa13.87□□□□□ -0.19
SMG6-201ENST00000263073 SYT10Q6XYQ8 523 aa13.87□□□□□ -0.19
SMG6-201ENST00000263073 ZBTB3Q9H5J0 574 aa13.87□□□□□ -0.19
SMG6-201ENST00000263073 CCDC194A0A1B0GVG4 234 aa13.87□□□□□ -0.19
SMG6-201ENST00000263073 PPP1R12BO60237 982 aaPredicted RBP13.87□□□□□ -0.19
SMG6-201ENST00000263073 CAPN2P17655 700 aa13.87□□□□□ -0.19
SMG6-201ENST00000263073 CCDC94Q9BW85 323 aaPredicted RBP13.87□□□□□ -0.19
SMG6-201ENST00000263073 CCDC171Q6TFL3 1326 aa13.86□□□□□ -0.19
SMG6-201ENST00000263073 RAPGEF3O95398 923 aa13.86□□□□□ -0.19
SMG6-201ENST00000263073 SYKP43405 635 aa13.86□□□□□ -0.19
SMG6-201ENST00000263073 ECHDC1Q9NTX5 307 aa13.86□□□□□ -0.19
SMG6-201ENST00000263073 HMGB1P09429 215 aaKnown RBP13.86□□□□□ -0.19
SMG6-201ENST00000263073 IARSP41252 1262 aaKnown RBP13.86□□□□□ -0.19
SMG6-201ENST00000263073 METAP2P50579 478 aaKnown RBP eCLIP13.86□□□□□ -0.19
SMG6-201ENST00000263073 LZTFL1Q9NQ48 299 aa13.86□□□□□ -0.19
SMG6-201ENST00000263073 U2AF2P26368 475 aaKnown RBP eCLIP13.86□□□□□ -0.197e-7■■■□□ 15.9
SMG6-201ENST00000263073 ARFGAP3Q9NP61 516 aa13.86□□□□□ -0.19
SMG6-201ENST00000263073 A0A087WZG4 1122 aa13.86□□□□□ -0.19
SMG6-201ENST00000263073 RRAGBQ5VZM2 374 aa13.86□□□□□ -0.19
SMG6-201ENST00000263073 SMIM23A6NLE4 172 aa13.86□□□□□ -0.19
SMG6-201ENST00000263073 ATRIPQ8WXE1 791 aa13.86□□□□□ -0.19
SMG6-201ENST00000263073 CEP63Q96MT8 703 aa13.86□□□□□ -0.19
SMG6-201ENST00000263073 POTEB2H3BUK9 544 aa13.85□□□□□ -0.19
SMG6-201ENST00000263073 RABEP2Q9H5N1 569 aa13.85□□□□□ -0.19
SMG6-201ENST00000263073 AKAP2Q9Y2D5 859 aa13.85□□□□□ -0.19
SMG6-201ENST00000263073 HECW1Q76N89 1606 aa13.85□□□□□ -0.19
SMG6-201ENST00000263073 CCDC102BQ68D86 513 aa13.85□□□□□ -0.19
SMG6-201ENST00000263073 TRIM47Q96LD4 638 aa13.85□□□□□ -0.19
SMG6-201ENST00000263073 VPS36Q86VN1 386 aa13.85□□□□□ -0.19
SMG6-201ENST00000263073 ARID5AQ03989 594 aa13.84□□□□□ -0.19
SMG6-201ENST00000263073 CEP57Q86XR8 500 aa13.84□□□□□ -0.19
SMG6-201ENST00000263073 PDIA4P13667 645 aaKnown RBP13.84□□□□□ -0.19
SMG6-201ENST00000263073 TRIM21P19474 475 aaKnown RBP13.84□□□□□ -0.19
SMG6-201ENST00000263073 Q6ZUG5 572 aa13.84□□□□□ -0.19
SMG6-201ENST00000263073 PSMD1Q99460 953 aa13.84□□□□□ -0.19
SMG6-201ENST00000263073 PLEKHH2Q8IVE3 1493 aa13.84□□□□□ -0.19
SMG6-201ENST00000263073 ATAD2Q6PL18 1390 aa13.84□□□□□ -0.19
SMG6-201ENST00000263073 KLF18A0A0U1RQI7 1052 aa13.84□□□□□ -0.19
SMG6-201ENST00000263073 F13A1P00488 732 aa13.84□□□□□ -0.19
SMG6-201ENST00000263073 FAM200AQ8TCP9 573 aa13.84□□□□□ -0.19
SMG6-201ENST00000263073 HYPKQ9NX55 129 aa13.84□□□□□ -0.19
SMG6-201ENST00000263073 NCOA1Q15788 1441 aa13.84□□□□□ -0.19
SMG6-201ENST00000263073 PI4KAP2A4QPH2 592 aa13.84□□□□□ -0.19
SMG6-201ENST00000263073 STX17P56962 302 aa13.84□□□□□ -0.19
SMG6-201ENST00000263073 IFIT5Q13325 482 aaKnown RBP13.84□□□□□ -0.19
SMG6-201ENST00000263073 PI4KAP1Q8N8J0 262 aa13.84□□□□□ -0.19
SMG6-201ENST00000263073 CTAGE15A4D2H0 777 aa13.84□□□□□ -0.19
SMG6-201ENST00000263073 CTAGE8P0CG41 777 aa13.84□□□□□ -0.19
SMG6-201ENST00000263073 CPA1P15085 419 aa13.84□□□□□ -0.19
SMG6-201ENST00000263073 CTNNA2P26232 953 aa13.84□□□□□ -0.19
SMG6-201ENST00000263073 TYRO3Q06418 890 aa13.84□□□□□ -0.19
SMG6-201ENST00000263073 CTAGE6Q86UF2 777 aa13.84□□□□□ -0.19
SMG6-201ENST00000263073 CTAGE4Q8IX94 777 aa13.84□□□□□ -0.19
SMG6-201ENST00000263073 CEP112Q8N8E3 955 aa13.83□□□□□ -0.19
SMG6-201ENST00000263073 CCDC97Q96F63 343 aaPredicted RBP13.83□□□□□ -0.19
SMG6-201ENST00000263073 PUS7Q96PZ0 661 aaKnown RBP13.83□□□□□ -0.19
SMG6-201ENST00000263073 RBSNQ9H1K0 784 aa13.83□□□□□ -0.19
SMG6-201ENST00000263073 ADGRF5Q8IZF2 1346 aa13.83□□□□□ -0.19
SMG6-201ENST00000263073 ZEB2O60315 1214 aa13.83□□□□□ -0.2
SMG6-201ENST00000263073 RLBP1P12271 317 aa13.83□□□□□ -0.2
SMG6-201ENST00000263073 DZIP1Q86YF9 867 aaKnown RBP13.83□□□□□ -0.2
SMG6-201ENST00000263073 RGS22Q8NE09 1264 aa13.83□□□□□ -0.2
SMG6-201ENST00000263073 PRDM11Q9NQV5 511 aa13.83□□□□□ -0.2
SMG6-201ENST00000263073 CCDC196A0A1B0GTZ2 297 aa13.83□□□□□ -0.2
SMG6-201ENST00000263073 PRC1O43663 620 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms