RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 TTC37Q6PGP7 1564 aa18.61■□□□□ 0.57
PRPF40B-201ENST00000261897 TRIM66O15016 1216 aa18.61■□□□□ 0.57
PRPF40B-201ENST00000261897 GLRX3O76003 335 aaKnown RBP18.61■□□□□ 0.57
PRPF40B-201ENST00000261897 ATP2B1P20020 1258 aa18.61■□□□□ 0.57
PRPF40B-201ENST00000261897 BRPF1P55201 1214 aaPredicted RBP18.61■□□□□ 0.57
PRPF40B-201ENST00000261897 GNG11P61952 73 aa18.61■□□□□ 0.57
PRPF40B-201ENST00000261897 LEKR1Q6ZMV7 388 aa18.61■□□□□ 0.57
PRPF40B-201ENST00000261897 NBPF7P0C2Y1 421 aaPredicted RBP18.6■□□□□ 0.57
PRPF40B-201ENST00000261897 CREB3L3Q68CJ9 461 aa18.6■□□□□ 0.57
PRPF40B-201ENST00000261897 OTUD7BQ6GQQ9 843 aa18.6■□□□□ 0.57
PRPF40B-201ENST00000261897 CLSTN2Q9H4D0 955 aa18.6■□□□□ 0.57
PRPF40B-201ENST00000261897 RABEP2Q9H5N1 569 aa18.6■□□□□ 0.57
PRPF40B-201ENST00000261897 MORC2Q9Y6X9 1032 aaPredicted RBP18.6■□□□□ 0.57
PRPF40B-201ENST00000261897 UTP14AQ9BVJ6 771 aaKnown RBP18.6■□□□□ 0.57
PRPF40B-201ENST00000261897 PI4KAP2A4QPH2 592 aa18.6■□□□□ 0.57
PRPF40B-201ENST00000261897 RBM6P78332 1123 aaKnown RBP18.6■□□□□ 0.57
PRPF40B-201ENST00000261897 PI4KAP1Q8N8J0 262 aa18.6■□□□□ 0.57
PRPF40B-201ENST00000261897 ANO10Q9NW15 660 aa18.6■□□□□ 0.57
PRPF40B-201ENST00000261897 ZNF853P0CG23 659 aa18.59■□□□□ 0.57
PRPF40B-201ENST00000261897 OAS2P29728 719 aaKnown RBP18.59■□□□□ 0.57
PRPF40B-201ENST00000261897 NMIQ13287 307 aaPredicted RBP18.59■□□□□ 0.57
PRPF40B-201ENST00000261897 CFAP45Q9UL16 551 aa18.59■□□□□ 0.57
PRPF40B-201ENST00000261897 PTCH1Q13635 1447 aa18.59■□□□□ 0.57
PRPF40B-201ENST00000261897 EVCP57679 992 aa18.59■□□□□ 0.57
PRPF40B-201ENST00000261897 FAM193AP78312 1265 aa18.59■□□□□ 0.57
PRPF40B-201ENST00000261897 RAD51AP2Q09MP3 1159 aa18.59■□□□□ 0.57
PRPF40B-201ENST00000261897 GOLGA6L1Q8N7Z2 621 aa18.59■□□□□ 0.57
PRPF40B-201ENST00000261897 CPLX3Q8WVH0 158 aa18.59■□□□□ 0.57
PRPF40B-201ENST00000261897 AK7Q96M32 723 aa18.59■□□□□ 0.57
PRPF40B-201ENST00000261897 ESF1Q9H501 851 aaKnown RBP18.59■□□□□ 0.57
PRPF40B-201ENST00000261897 KARSQ15046 597 aaKnown RBP18.58■□□□□ 0.57
PRPF40B-201ENST00000261897 NGDNQ8NEJ9 315 aaKnown RBP18.58■□□□□ 0.57
PRPF40B-201ENST00000261897 SRRTQ9BXP5 876 aaKnown RBP18.58■□□□□ 0.57
PRPF40B-201ENST00000261897 CWC15Q9P013 229 aaKnown RBP18.58■□□□□ 0.57
PRPF40B-201ENST00000261897 CHL1O00533 1208 aa18.58■□□□□ 0.56
PRPF40B-201ENST00000261897 ST5P78524 1137 aa18.58■□□□□ 0.56
PRPF40B-201ENST00000261897 MTHFSDQ2M296 383 aaKnown RBP18.58■□□□□ 0.56
PRPF40B-201ENST00000261897 LSG1Q9H089 658 aaKnown RBP18.58■□□□□ 0.56
PRPF40B-201ENST00000261897 RASSF4Q9H2L5 321 aa18.58■□□□□ 0.56
PRPF40B-201ENST00000261897 PLEKHA4Q9H4M7 779 aa18.58■□□□□ 0.56
PRPF40B-201ENST00000261897 NCOA5Q9HCD5 579 aaKnown RBP18.58■□□□□ 0.56
PRPF40B-201ENST00000261897 NUDT16Q96DE0 195 aaKnown RBP18.57■□□□□ 0.56
PRPF40B-201ENST00000261897 SOS1Q07889 1333 aaPredicted RBP18.57■□□□□ 0.56
PRPF40B-201ENST00000261897 GTF2A1P52655 376 aaPredicted RBP18.57■□□□□ 0.56
PRPF40B-201ENST00000261897 COL9A3Q14050 684 aaPredicted RBP18.57■□□□□ 0.56
PRPF40B-201ENST00000261897 KLHDC4Q8TBB5 520 aa18.57■□□□□ 0.56
PRPF40B-201ENST00000261897 VPS18Q9P253 973 aa18.57■□□□□ 0.56
PRPF40B-201ENST00000261897 PUF60Q9UHX1 559 aaKnown RBP18.57■□□□□ 0.56
PRPF40B-201ENST00000261897 PNMA6AP0CW24 399 aaPredicted RBP18.56■□□□□ 0.56
PRPF40B-201ENST00000261897 ZSCAN26Q16670 478 aa18.56■□□□□ 0.56
PRPF40B-201ENST00000261897 XPO4Q9C0E2 1151 aaKnown RBP18.56■□□□□ 0.56
PRPF40B-201ENST00000261897 VPS53Q5VIR6 699 aa18.56■□□□□ 0.56
PRPF40B-201ENST00000261897 CCDC129Q6ZRS4 1044 aa18.56■□□□□ 0.56
PRPF40B-201ENST00000261897 FUCA2Q9BTY2 467 aa18.56■□□□□ 0.56
PRPF40B-201ENST00000261897 OSBPL3Q9H4L5 887 aa18.56■□□□□ 0.56
PRPF40B-201ENST00000261897 PES1O00541 588 aaKnown RBP18.56■□□□□ 0.56
PRPF40B-201ENST00000261897 ECHDC1Q9NTX5 307 aa18.56■□□□□ 0.56
PRPF40B-201ENST00000261897 CAPN2P17655 700 aa18.55■□□□□ 0.56
PRPF40B-201ENST00000261897 NEUROD6Q96NK8 337 aa18.55■□□□□ 0.56
PRPF40B-201ENST00000261897 USP44Q9H0E7 712 aa18.55■□□□□ 0.56
PRPF40B-201ENST00000261897 ARHGEF5Q12774 1597 aa18.55■□□□□ 0.56
PRPF40B-201ENST00000261897 HSP90B2PQ58FF3 399 aa18.55■□□□□ 0.56
PRPF40B-201ENST00000261897 PGBD1Q96JS3 809 aa18.55■□□□□ 0.56
PRPF40B-201ENST00000261897 DRC1Q96MC2 740 aa18.55■□□□□ 0.56
PRPF40B-201ENST00000261897 SYNE3Q6ZMZ3 975 aa18.55■□□□□ 0.56
PRPF40B-201ENST00000261897 TMEM87AQ8NBN3 555 aa18.55■□□□□ 0.56
PRPF40B-201ENST00000261897 CLTCL1P53675 1640 aa18.55■□□□□ 0.56
PRPF40B-201ENST00000261897 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.54■□□□□ 0.56
PRPF40B-201ENST00000261897 CPLX1O14810 134 aa18.54■□□□□ 0.56
PRPF40B-201ENST00000261897 APPP05067 770 aa18.54■□□□□ 0.56
PRPF40B-201ENST00000261897 TAF6LQ9Y6J9 622 aa18.54■□□□□ 0.56
PRPF40B-201ENST00000261897 ATP10DQ9P241 1426 aa18.54■□□□□ 0.56
PRPF40B-201ENST00000261897 MARCKSP29966 332 aaPredicted RBP18.54■□□□□ 0.56
PRPF40B-201ENST00000261897 Q6ZUG5 572 aa18.54■□□□□ 0.56
PRPF40B-201ENST00000261897 NEMFO60524 1076 aa18.53■□□□□ 0.56
PRPF40B-201ENST00000261897 ARFGAP3Q9NP61 516 aa18.53■□□□□ 0.56
PRPF40B-201ENST00000261897 TDRD7Q8NHU6 1098 aaKnown RBP18.53■□□□□ 0.56
PRPF40B-201ENST00000261897 SMARCE1Q969G3 411 aa18.53■□□□□ 0.56
PRPF40B-201ENST00000261897 PPARDQ03181 441 aa18.53■□□□□ 0.56
PRPF40B-201ENST00000261897 TTC14Q96N46 770 aa18.53■□□□□ 0.56
PRPF40B-201ENST00000261897 SEC62Q99442 399 aaKnown RBP18.53■□□□□ 0.56
PRPF40B-201ENST00000261897 HSP90AB4PQ58FF6 505 aa18.52■□□□□ 0.56
PRPF40B-201ENST00000261897 SMC1AQ14683 1233 aaKnown RBP18.52■□□□□ 0.56
PRPF40B-201ENST00000261897 ANKRD1Q15327 319 aa18.52■□□□□ 0.56
PRPF40B-201ENST00000261897 SBNO2Q9Y2G9 1366 aa18.52■□□□□ 0.55
PRPF40B-201ENST00000261897 PLA2G4DQ86XP0 818 aa18.51■□□□□ 0.55
PRPF40B-201ENST00000261897 TXLNBQ8N3L3 684 aa18.51■□□□□ 0.55
PRPF40B-201ENST00000261897 PLCH2O75038 1416 aa18.51■□□□□ 0.55
PRPF40B-201ENST00000261897 CEP152O94986 1710 aa18.51■□□□□ 0.55
PRPF40B-201ENST00000261897 SLC27A2O14975 620 aa18.51■□□□□ 0.55
PRPF40B-201ENST00000261897 CASQ1P31415 396 aa18.51■□□□□ 0.55
PRPF40B-201ENST00000261897 CCDC12Q8WUD4 166 aaPredicted RBP18.51■□□□□ 0.55
PRPF40B-201ENST00000261897 PPP1R13BQ96KQ4 1090 aa18.51■□□□□ 0.55
PRPF40B-201ENST00000261897 LZTFL1Q9NQ48 299 aa18.51■□□□□ 0.55
PRPF40B-201ENST00000261897 TOP1P11387 765 aaKnown RBP18.51■□□□□ 0.55
PRPF40B-201ENST00000261897 GSDMDP57764 484 aa18.51■□□□□ 0.55
PRPF40B-201ENST00000261897 APOBRQ0VD83 1088 aa18.51■□□□□ 0.55
PRPF40B-201ENST00000261897 CWF19L2Q2TBE0 894 aaKnown RBP18.51■□□□□ 0.55
PRPF40B-201ENST00000261897 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.51■□□□□ 0.55
PRPF40B-201ENST00000261897 KIF2AO00139 706 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms