RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 VPS37CA5D8V6 355 aaPredicted RBP19.61■□□□□ 0.73
TM9SF1-201ENST00000261789 TPCN1Q9ULQ1 816 aa19.61■□□□□ 0.73
TM9SF1-201ENST00000261789 PHF14O94880 888 aa19.61■□□□□ 0.73
TM9SF1-201ENST00000261789 PTMAP06454 111 aaKnown RBP19.61■□□□□ 0.73
TM9SF1-201ENST00000261789 EPHA10Q5JZY3 1008 aa19.61■□□□□ 0.73
TM9SF1-201ENST00000261789 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.61■□□□□ 0.73
TM9SF1-201ENST00000261789 CCDC39Q9UFE4 941 aa19.61■□□□□ 0.73
TM9SF1-201ENST00000261789 MTMR6Q9Y217 621 aa19.61■□□□□ 0.73
TM9SF1-201ENST00000261789 HCLS1P14317 486 aaPredicted RBP19.6■□□□□ 0.73
TM9SF1-201ENST00000261789 CCDC183Q5T5S1 534 aa19.6■□□□□ 0.73
TM9SF1-201ENST00000261789 USP25Q9UHP3 1055 aa19.6■□□□□ 0.73
TM9SF1-201ENST00000261789 UBE2HP62256 183 aa19.6■□□□□ 0.73
TM9SF1-201ENST00000261789 NDUFB9Q9Y6M9 179 aa19.6■□□□□ 0.73
TM9SF1-201ENST00000261789 DDX58O95786 925 aaKnown RBP19.59■□□□□ 0.73
TM9SF1-201ENST00000261789 ZKSCAN1P17029 563 aaPredicted RBP19.59■□□□□ 0.73
TM9SF1-201ENST00000261789 NFATC2IPQ8NCF5 419 aa19.59■□□□□ 0.73
TM9SF1-201ENST00000261789 FSD1Q9BTV5 496 aa19.59■□□□□ 0.73
TM9SF1-201ENST00000261789 TPM2P07951 284 aa19.59■□□□□ 0.73
TM9SF1-201ENST00000261789 GIMAP6Q6P9H5 292 aa19.59■□□□□ 0.73
TM9SF1-201ENST00000261789 ZNF790Q6PG37 636 aa19.59■□□□□ 0.73
TM9SF1-201ENST00000261789 MAP4K1Q92918 833 aa19.59■□□□□ 0.73
TM9SF1-201ENST00000261789 ZNF830Q96NB3 372 aaPredicted RBP19.59■□□□□ 0.73
TM9SF1-201ENST00000261789 SLC27A2O14975 620 aa19.58■□□□□ 0.73
TM9SF1-201ENST00000261789 CHGBP05060 677 aa19.58■□□□□ 0.73
TM9SF1-201ENST00000261789 FAM173BQ6P4H8 233 aa19.58■□□□□ 0.73
TM9SF1-201ENST00000261789 FERMT3Q86UX7 667 aa19.58■□□□□ 0.73
TM9SF1-201ENST00000261789 XAGE3Q8WTP9 111 aa19.58■□□□□ 0.73
TM9SF1-201ENST00000261789 MYD88Q99836 296 aa19.58■□□□□ 0.73
TM9SF1-201ENST00000261789 NCAPD2Q15021 1401 aa19.58■□□□□ 0.73
TM9SF1-201ENST00000261789 COPS6Q7L5N1 327 aa19.58■□□□□ 0.72
TM9SF1-201ENST00000261789 KRT28Q7Z3Y7 464 aa19.58■□□□□ 0.72
TM9SF1-201ENST00000261789 ZNF589Q86UQ0 364 aaPredicted RBP19.58■□□□□ 0.72
TM9SF1-201ENST00000261789 KCNB2Q92953 911 aa19.58■□□□□ 0.72
TM9SF1-201ENST00000261789 TM6SF1Q9BZW5 370 aa19.58■□□□□ 0.72
TM9SF1-201ENST00000261789 UTYO14607 1347 aa19.57■□□□□ 0.72
TM9SF1-201ENST00000261789 NEURL1BA8MQ27 555 aa19.57■□□□□ 0.72
TM9SF1-201ENST00000261789 NLRP2Q9NX02 1062 aa19.57■□□□□ 0.72
TM9SF1-201ENST00000261789 CHMP3Q9Y3E7 222 aa19.57■□□□□ 0.72
TM9SF1-201ENST00000261789 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.57■□□□□ 0.72
TM9SF1-201ENST00000261789 RGPD5Q99666 1765 aa19.56■□□□□ 0.72
TM9SF1-201ENST00000261789 DDX17Q92841 729 aaKnown RBP19.56■□□□□ 0.72
TM9SF1-201ENST00000261789 PHRF1Q9P1Y6 1649 aaKnown RBP19.56■□□□□ 0.72
TM9SF1-201ENST00000261789 ZSCAN31Q96LW9 406 aaPredicted RBP19.56■□□□□ 0.72
TM9SF1-201ENST00000261789 SH2B1Q9NRF2 756 aaPredicted RBP19.56■□□□□ 0.72
TM9SF1-201ENST00000261789 HDAC5Q9UQL6 1122 aa19.56■□□□□ 0.72
TM9SF1-201ENST00000261789 ATP6V1DQ9Y5K8 247 aa19.56■□□□□ 0.72
TM9SF1-201ENST00000261789 ERBB3P21860 1342 aa19.55■□□□□ 0.72
TM9SF1-201ENST00000261789 GCKRQ14397 625 aa19.55■□□□□ 0.72
TM9SF1-201ENST00000261789 USP16Q9Y5T5 823 aa19.55■□□□□ 0.72
TM9SF1-201ENST00000261789 RRP9O43818 475 aaKnown RBP19.54■□□□□ 0.72
TM9SF1-201ENST00000261789 RBM10P98175 930 aaKnown RBP19.54■□□□□ 0.72
TM9SF1-201ENST00000261789 PLCB2Q00722 1185 aa19.54■□□□□ 0.72
TM9SF1-201ENST00000261789 STK3Q13188 491 aa19.54■□□□□ 0.72
TM9SF1-201ENST00000261789 LARP1BQ659C4 914 aaKnown RBP19.54■□□□□ 0.72
TM9SF1-201ENST00000261789 LARP1Q6PKG0 1096 aaKnown RBP19.54■□□□□ 0.72
TM9SF1-201ENST00000261789 CDC37L1Q7L3B6 337 aa19.54■□□□□ 0.72
TM9SF1-201ENST00000261789 ZNF496Q96IT1 587 aaPredicted RBP19.54■□□□□ 0.72
TM9SF1-201ENST00000261789 NEXNQ0ZGT2 675 aa19.54■□□□□ 0.72
TM9SF1-201ENST00000261789 SLC52A2Q9HAB3 445 aa19.54■□□□□ 0.72
TM9SF1-201ENST00000261789 ADCY5O95622 1261 aa19.53■□□□□ 0.72
TM9SF1-201ENST00000261789 RAPGEF4Q8WZA2 1011 aa19.53■□□□□ 0.72
TM9SF1-201ENST00000261789 CCDC9Q9Y3X0 531 aaKnown RBP19.53■□□□□ 0.72
TM9SF1-201ENST00000261789 SLIT3O75094 1523 aa19.53■□□□□ 0.72
TM9SF1-201ENST00000261789 SIPA1L3O60292 1781 aaPredicted RBP19.53■□□□□ 0.72
TM9SF1-201ENST00000261789 OVOS2A0A0G2JMS6 1433 aa19.52■□□□□ 0.72
TM9SF1-201ENST00000261789 ATP5J2-PTCD1G3V325 749 aa19.52■□□□□ 0.72
TM9SF1-201ENST00000261789 PTCD1O75127 700 aaKnown RBP19.52■□□□□ 0.72
TM9SF1-201ENST00000261789 NPHP3Q7Z494 1330 aa19.52■□□□□ 0.72
TM9SF1-201ENST00000261789 KDM6AO15550 1401 aaPredicted RBP19.52■□□□□ 0.72
TM9SF1-201ENST00000261789 MCM5P33992 734 aa19.52■□□□□ 0.72
TM9SF1-201ENST00000261789 BLOC1S2Q6QNY1 142 aa19.52■□□□□ 0.72
TM9SF1-201ENST00000261789 HIP1O00291 1037 aa19.51■□□□□ 0.71
TM9SF1-201ENST00000261789 FAM184AQ8NB25 1140 aa19.51■□□□□ 0.71
TM9SF1-201ENST00000261789 TTC12Q9H892 705 aaPredicted RBP19.51■□□□□ 0.71
TM9SF1-201ENST00000261789 DBNLQ9UJU6 430 aaKnown RBP19.51■□□□□ 0.71
TM9SF1-201ENST00000261789 TFCP2Q12800 502 aa19.51■□□□□ 0.71
TM9SF1-201ENST00000261789 TOB2Q14106 344 aaPredicted RBP19.51■□□□□ 0.71
TM9SF1-201ENST00000261789 TTC6Q86TZ1 520 aa19.51■□□□□ 0.71
TM9SF1-201ENST00000261789 METTL22Q9BUU2 404 aaPredicted RBP19.51■□□□□ 0.71
TM9SF1-201ENST00000261789 C5P01031 1676 aa19.5■□□□□ 0.71
TM9SF1-201ENST00000261789 PHKG2P15735 406 aa19.5■□□□□ 0.71
TM9SF1-201ENST00000261789 PSMA5P28066 241 aa19.5■□□□□ 0.71
TM9SF1-201ENST00000261789 CCDC129Q6ZRS4 1044 aa19.5■□□□□ 0.71
TM9SF1-201ENST00000261789 ANKRD13DQ6ZTN6 518 aa19.5■□□□□ 0.71
TM9SF1-201ENST00000261789 UBE3BQ7Z3V4 1068 aa19.5■□□□□ 0.71
TM9SF1-201ENST00000261789 C17orf53Q8N3J3 647 aaPredicted RBP19.5■□□□□ 0.71
TM9SF1-201ENST00000261789 CABLES1Q8TDN4 633 aa19.5■□□□□ 0.71
TM9SF1-201ENST00000261789 SEC62Q99442 399 aaKnown RBP19.5■□□□□ 0.71
TM9SF1-201ENST00000261789 COL15A1P39059 1388 aa19.5■□□□□ 0.71
TM9SF1-201ENST00000261789 AP5Z1O43299 807 aa19.5■□□□□ 0.71
TM9SF1-201ENST00000261789 RPS6KB1P23443 525 aa19.5■□□□□ 0.71
TM9SF1-201ENST00000261789 FUCA2Q9BTY2 467 aa19.5■□□□□ 0.71
TM9SF1-201ENST00000261789 MED23Q9ULK4 1368 aa19.49■□□□□ 0.71
TM9SF1-201ENST00000261789 UVSSAQ2YD98 709 aa19.49■□□□□ 0.71
TM9SF1-201ENST00000261789 PROSER2Q86WR7 435 aaPredicted RBP19.49■□□□□ 0.71
TM9SF1-201ENST00000261789 UQCRHLA0A096LP55 91 aa19.49■□□□□ 0.71
TM9SF1-201ENST00000261789 TAF5LO75529 589 aa19.49■□□□□ 0.71
TM9SF1-201ENST00000261789 LETM1O95202 739 aaPredicted RBP19.49■□□□□ 0.71
TM9SF1-201ENST00000261789 UQCRHP07919 91 aa19.49■□□□□ 0.71
TM9SF1-201ENST00000261789 PTPN12Q05209 780 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms