RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 LARP1BQ659C4 914 aaKnown RBP23.1■■□□□ 1.29
SCARB1-201ENST00000261693 TSC1Q92574 1164 aa23.1■■□□□ 1.29
SCARB1-201ENST00000261693 EAF2Q96CJ1 260 aaPredicted RBP23.1■■□□□ 1.29
SCARB1-201ENST00000261693 ERC1Q8IUD2 1116 aa23.1■■□□□ 1.29
SCARB1-201ENST00000261693 SUCLG2Q96I99 432 aa23.1■■□□□ 1.29
SCARB1-201ENST00000261693 CHMP4AQ9BY43 222 aa23.1■■□□□ 1.29
SCARB1-201ENST00000261693 GIGYF1O75420 1035 aaPredicted RBP23.09■■□□□ 1.29
SCARB1-201ENST00000261693 SASH1O94885 1247 aa23.09■■□□□ 1.29
SCARB1-201ENST00000261693 PLEKHO1Q53GL0 409 aaPredicted RBP23.09■■□□□ 1.29
SCARB1-201ENST00000261693 CDC37L1Q7L3B6 337 aa23.09■■□□□ 1.29
SCARB1-201ENST00000261693 KCNB2Q92953 911 aa23.09■■□□□ 1.29
SCARB1-201ENST00000261693 BOLA2Q9H3K6 86 aa23.09■■□□□ 1.29
SCARB1-201ENST00000261693 BICC1Q9H694 974 aaKnown RBP23.09■■□□□ 1.29
SCARB1-201ENST00000261693 TAF6LQ9Y6J9 622 aa23.09■■□□□ 1.29
SCARB1-201ENST00000261693 RNMTO43148 476 aaKnown RBP23.08■■□□□ 1.29
SCARB1-201ENST00000261693 ALDH1L1O75891 902 aa23.08■■□□□ 1.29
SCARB1-201ENST00000261693 KAZALD1Q96I82 304 aa23.08■■□□□ 1.29
SCARB1-201ENST00000261693 CAMK4Q16566 473 aa23.08■■□□□ 1.28
SCARB1-201ENST00000261693 C1orf141Q5JVX7 400 aa23.08■■□□□ 1.28
SCARB1-201ENST00000261693 SPC24Q8NBT2 197 aa23.08■■□□□ 1.28
SCARB1-201ENST00000261693 KLHDC4Q8TBB5 520 aa23.08■■□□□ 1.28
SCARB1-201ENST00000261693 MAP7D2Q96T17 732 aa23.08■■□□□ 1.28
SCARB1-201ENST00000261693 A0A0D9SFI3 127 aa23.07■■□□□ 1.28
SCARB1-201ENST00000261693 SLC27A2O14975 620 aa23.07■■□□□ 1.28
SCARB1-201ENST00000261693 PSME1Q06323 249 aa23.07■■□□□ 1.28
SCARB1-201ENST00000261693 G3BP1Q13283 466 aaKnown RBP eCLIP23.07■■□□□ 1.28
SCARB1-201ENST00000261693 MAP4K1Q92918 833 aa23.07■■□□□ 1.28
SCARB1-201ENST00000261693 TTC6Q86TZ1 520 aa23.07■■□□□ 1.28
SCARB1-201ENST00000261693 USP54Q70EL1 1684 aa23.06■■□□□ 1.28
SCARB1-201ENST00000261693 PXDNQ92626 1479 aa23.06■■□□□ 1.28
SCARB1-201ENST00000261693 GRM8O00222 908 aa23.06■■□□□ 1.28
SCARB1-201ENST00000261693 FSD1Q9BTV5 496 aa23.06■■□□□ 1.28
SCARB1-201ENST00000261693 STK3Q13188 491 aa23.05■■□□□ 1.28
SCARB1-201ENST00000261693 ESCO1Q5FWF5 840 aa23.05■■□□□ 1.28
SCARB1-201ENST00000261693 MYRIPQ8NFW9 859 aa23.05■■□□□ 1.28
SCARB1-201ENST00000261693 LIG1P18858 919 aa23.04■■□□□ 1.28
SCARB1-201ENST00000261693 NFAT5O94916 1531 aa23.04■■□□□ 1.28
SCARB1-201ENST00000261693 CCDC192P0DO97 292 aa23.04■■□□□ 1.28
SCARB1-201ENST00000261693 KRT85P78386 507 aa23.04■■□□□ 1.28
SCARB1-201ENST00000261693 FAM177BA6PVY3 158 aa23.03■■□□□ 1.28
SCARB1-201ENST00000261693 PKNOX2Q96KN3 472 aa23.03■■□□□ 1.28
SCARB1-201ENST00000261693 LMO7Q8WWI1 1683 aa23.03■■□□□ 1.28
SCARB1-201ENST00000261693 PSMA5P28066 241 aa23.03■■□□□ 1.28
SCARB1-201ENST00000261693 BLOC1S2Q6QNY1 142 aa23.03■■□□□ 1.28
SCARB1-201ENST00000261693 LINS1Q8NG48 757 aa23.03■■□□□ 1.28
SCARB1-201ENST00000261693 EDC3Q96F86 508 aaKnown RBP23.03■■□□□ 1.28
SCARB1-201ENST00000261693 TFIP11Q9UBB9 837 aaKnown RBP23.03■■□□□ 1.28
SCARB1-201ENST00000261693 ZNF589Q86UQ0 364 aaPredicted RBP23.02■■□□□ 1.28
SCARB1-201ENST00000261693 KCNF1Q9H3M0 494 aa23.02■■□□□ 1.28
SCARB1-201ENST00000261693 CKAP2LQ8IYA6 745 aa23.02■■□□□ 1.28
SCARB1-201ENST00000261693 LMOD2Q6P5Q4 547 aa23.01■■□□□ 1.27
SCARB1-201ENST00000261693 PYCARDQ9ULZ3 195 aa23.01■■□□□ 1.27
SCARB1-201ENST00000261693 HIP1O00291 1037 aa23.01■■□□□ 1.27
SCARB1-201ENST00000261693 AMOTQ4VCS5 1084 aa23.01■■□□□ 1.27
SCARB1-201ENST00000261693 HDAC5Q9UQL6 1122 aa23.01■■□□□ 1.27
SCARB1-201ENST00000261693 LARP1Q6PKG0 1096 aaKnown RBP23■■□□□ 1.27
SCARB1-201ENST00000261693 KCNH5Q8NCM2 988 aa23■■□□□ 1.27
SCARB1-201ENST00000261693 NUP62CLQ9H1M0 184 aa23■■□□□ 1.27
SCARB1-201ENST00000261693 SPTLC3Q9NUV7 552 aa23■■□□□ 1.27
SCARB1-201ENST00000261693 MYL6BP14649 208 aa22.99■■□□□ 1.27
SCARB1-201ENST00000261693 RPS6KB1P23443 525 aa22.99■■□□□ 1.27
SCARB1-201ENST00000261693 TOB2Q14106 344 aaPredicted RBP22.99■■□□□ 1.27
SCARB1-201ENST00000261693 MAP3K11Q16584 847 aa22.99■■□□□ 1.27
SCARB1-201ENST00000261693 LUZP1Q86V48 1076 aa22.99■■□□□ 1.27
SCARB1-201ENST00000261693 PRIMPOLQ96LW4 560 aa22.99■■□□□ 1.27
SCARB1-201ENST00000261693 RNF20Q5VTR2 975 aa22.99■■□□□ 1.27
SCARB1-201ENST00000261693 RIC3Q7Z5B4 369 aa22.99■■□□□ 1.27
SCARB1-201ENST00000261693 DACT1Q9NYF0 836 aa22.99■■□□□ 1.27
SCARB1-201ENST00000261693 NDUFB9Q9Y6M9 179 aa22.99■■□□□ 1.27
SCARB1-201ENST00000261693 NPHP4O75161 1426 aaPredicted RBP22.99■■□□□ 1.27
SCARB1-201ENST00000261693 IGKV5-2P06315 115 aa22.98■■□□□ 1.27
SCARB1-201ENST00000261693 MRVI1Q9Y6F6 885 aa22.98■■□□□ 1.27
SCARB1-201ENST00000261693 GOLGA6L4A6NEF3 574 aa22.98■■□□□ 1.27
SCARB1-201ENST00000261693 TYRO3Q06418 890 aa22.98■■□□□ 1.27
SCARB1-201ENST00000261693 SLC39A6Q13433 755 aa22.98■■□□□ 1.27
SCARB1-201ENST00000261693 MTERF4Q7Z6M4 381 aaKnown RBP22.98■■□□□ 1.27
SCARB1-201ENST00000261693 CHD2O14647 1828 aaKnown RBP22.98■■□□□ 1.27
SCARB1-201ENST00000261693 DDX58O95786 925 aaKnown RBP22.97■■□□□ 1.27
SCARB1-201ENST00000261693 PDCP20941 246 aa22.97■■□□□ 1.27
SCARB1-201ENST00000261693 KIAA1524Q8TCG1 905 aa22.97■■□□□ 1.27
SCARB1-201ENST00000261693 SPATA32Q96LK8 384 aa22.97■■□□□ 1.27
SCARB1-201ENST00000261693 HMGN5P82970 282 aaKnown RBP22.97■■□□□ 1.27
SCARB1-201ENST00000261693 FAM200AQ8TCP9 573 aa22.97■■□□□ 1.27
SCARB1-201ENST00000261693 ANKRD24Q8TF21 1146 aa22.97■■□□□ 1.27
SCARB1-201ENST00000261693 HEG1Q9ULI3 1381 aa22.97■■□□□ 1.27
SCARB1-201ENST00000261693 GCP02774 474 aa22.96■■□□□ 1.27
SCARB1-201ENST00000261693 CHGBP05060 677 aa22.96■■□□□ 1.27
SCARB1-201ENST00000261693 PDIA6Q15084 440 aa22.96■■□□□ 1.27
SCARB1-201ENST00000261693 EPHA10Q5JZY3 1008 aa22.96■■□□□ 1.27
SCARB1-201ENST00000261693 TNMDQ9H2S6 317 aa22.96■■□□□ 1.27
SCARB1-201ENST00000261693 DDX21Q9NR30 783 aaKnown RBP eCLIP22.96■■□□□ 1.27
SCARB1-201ENST00000261693 ANKRD1Q15327 319 aa22.96■■□□□ 1.27
SCARB1-201ENST00000261693 ZNF710Q8N1W2 664 aa22.95■■□□□ 1.27
SCARB1-201ENST00000261693 UTYO14607 1347 aa22.95■■□□□ 1.26
SCARB1-201ENST00000261693 MED23Q9ULK4 1368 aa22.95■■□□□ 1.26
SCARB1-201ENST00000261693 JAK2O60674 1132 aa22.95■■□□□ 1.26
SCARB1-201ENST00000261693 SNRKQ9NRH2 765 aa22.95■■□□□ 1.26
SCARB1-201ENST00000261693 ELP1O95163 1332 aa22.95■■□□□ 1.26
SCARB1-201ENST00000261693 ANO6Q4KMQ2 910 aa22.95■■□□□ 1.26
SCARB1-201ENST00000261693 PTGS1P23219 599 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms