RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 ADGRF5Q8IZF2 1346 aa5.01□□□□□ -1.61
VPS13C-202ENST00000261517 PCP11498 1178 aaKnown RBP5.01□□□□□ -1.61
VPS13C-202ENST00000261517 USP8P40818 1118 aa5.01□□□□□ -1.61
VPS13C-202ENST00000261517 FKBP15Q5T1M5 1219 aa5.01□□□□□ -1.61
VPS13C-202ENST00000261517 ME1P48163 572 aa5.01□□□□□ -1.61
VPS13C-202ENST00000261517 RBM25P49756 843 aaKnown RBP5.01□□□□□ -1.61
VPS13C-202ENST00000261517 DZIP1Q86YF9 867 aaKnown RBP5.01□□□□□ -1.61
VPS13C-202ENST00000261517 HDAC9Q9UKV0 1011 aa5.01□□□□□ -1.61
VPS13C-202ENST00000261517 FLAD1Q8NFF5 587 aa5□□□□□ -1.61
VPS13C-202ENST00000261517 USP25Q9UHP3 1055 aa5□□□□□ -1.61
VPS13C-202ENST00000261517 HS1BP3Q53T59 392 aa5□□□□□ -1.61
VPS13C-202ENST00000261517 REREQ9P2R6 1566 aa5□□□□□ -1.61
VPS13C-202ENST00000261517 TUBB2AQ13885 445 aa5□□□□□ -1.61
VPS13C-202ENST00000261517 LZTS2Q9BRK4 669 aa5□□□□□ -1.61
VPS13C-202ENST00000261517 TUBB2BQ9BVA1 445 aa5□□□□□ -1.61
VPS13C-202ENST00000261517 PTPRTO14522 1441 aa5□□□□□ -1.61
VPS13C-202ENST00000261517 NBPF7P0C2Y1 421 aaPredicted RBP5□□□□□ -1.61
VPS13C-202ENST00000261517 ZNF804AQ7Z570 1209 aa5□□□□□ -1.61
VPS13C-202ENST00000261517 TAOK3Q9H2K8 898 aa5□□□□□ -1.61
VPS13C-202ENST00000261517 CDC42BPGQ6DT37 1551 aa5□□□□□ -1.61
VPS13C-202ENST00000261517 STRN4Q9NRL3 753 aa5□□□□□ -1.61
VPS13C-202ENST00000261517 NCAPD2Q15021 1401 aa5□□□□□ -1.61
VPS13C-202ENST00000261517 DDX46Q7L014 1031 aaKnown RBP5□□□□□ -1.61
VPS13C-202ENST00000261517 AMER1Q5JTC6 1135 aaPredicted RBP5□□□□□ -1.61
VPS13C-202ENST00000261517 KRI1Q8N9T8 703 aaKnown RBP5□□□□□ -1.61
VPS13C-202ENST00000261517 CCDC191Q8NCU4 936 aa5□□□□□ -1.61
VPS13C-202ENST00000261517 KCNG4Q8TDN1 519 aa5□□□□□ -1.61
VPS13C-202ENST00000261517 EYA3Q99504 573 aa5□□□□□ -1.61
VPS13C-202ENST00000261517 KCNA6P17658 529 aa5□□□□□ -1.61
VPS13C-202ENST00000261517 RRP12Q5JTH9 1297 aaKnown RBP5□□□□□ -1.61
VPS13C-202ENST00000261517 IP6K1Q92551 441 aa5□□□□□ -1.61
VPS13C-202ENST00000261517 ACEP12821 1306 aa5□□□□□ -1.61
VPS13C-202ENST00000261517 LINS1Q8NG48 757 aa5□□□□□ -1.61
VPS13C-202ENST00000261517 RBM28Q9NW13 759 aaKnown RBP5□□□□□ -1.61
VPS13C-202ENST00000261517 SLC12A7Q9Y666 1083 aa5□□□□□ -1.61
VPS13C-202ENST00000261517 LMTK2Q8IWU2 1503 aa5□□□□□ -1.61
VPS13C-202ENST00000261517 NUCB1Q02818 461 aa5□□□□□ -1.61
VPS13C-202ENST00000261517 TMC4Q7Z404 712 aa5□□□□□ -1.61
VPS13C-202ENST00000261517 NCOA7Q8NI08 942 aa5□□□□□ -1.61
VPS13C-202ENST00000261517 NGLY1Q96IV0 654 aa5□□□□□ -1.61
VPS13C-202ENST00000261517 NFKBIBQ15653 356 aa4.99□□□□□ -1.61
VPS13C-202ENST00000261517 CREBRFQ8IUR6 639 aa4.99□□□□□ -1.61
VPS13C-202ENST00000261517 DISP3Q9P2K9 1392 aa4.99□□□□□ -1.61
VPS13C-202ENST00000261517 TSPOAP1O95153 1857 aa4.99□□□□□ -1.61
VPS13C-202ENST00000261517 NAP1L1P55209 391 aaKnown RBP4.99□□□□□ -1.61
VPS13C-202ENST00000261517 ZCRB1Q8TBF4 217 aaKnown RBP4.99□□□□□ -1.61
VPS13C-202ENST00000261517 MAP3K4Q9Y6R4 1608 aa4.99□□□□□ -1.61
VPS13C-202ENST00000261517 SSRP1Q08945 709 aaKnown RBP4.99□□□□□ -1.61
VPS13C-202ENST00000261517 ZNF444Q8N0Y2 327 aaPredicted RBP4.99□□□□□ -1.61
VPS13C-202ENST00000261517 GBP2P32456 591 aaPredicted RBP4.99□□□□□ -1.61
VPS13C-202ENST00000261517 TPRNQ4KMQ1 711 aa4.99□□□□□ -1.61
VPS13C-202ENST00000261517 TMEM57Q8N5G2 664 aa4.99□□□□□ -1.61
VPS13C-202ENST00000261517 FBXW7Q969H0 707 aa4.99□□□□□ -1.61
VPS13C-202ENST00000261517 TSPYL1Q9H0U9 437 aa4.99□□□□□ -1.61
VPS13C-202ENST00000261517 ZNF213O14771 459 aa4.99□□□□□ -1.61
VPS13C-202ENST00000261517 TMEM2Q9UHN6 1383 aa4.99□□□□□ -1.61
VPS13C-202ENST00000261517 USO1O60763 962 aaKnown RBP4.99□□□□□ -1.61
VPS13C-202ENST00000261517 IL2RBP14784 551 aa4.99□□□□□ -1.61
VPS13C-202ENST00000261517 KSR2Q6VAB6 950 aa4.99□□□□□ -1.61
VPS13C-202ENST00000261517 NAA15Q9BXJ9 866 aaKnown RBP4.99□□□□□ -1.61
VPS13C-202ENST00000261517 TCP11L1Q9NUJ3 509 aa4.99□□□□□ -1.61
VPS13C-202ENST00000261517 UGGT1Q9NYU2 1555 aa4.99□□□□□ -1.61
VPS13C-202ENST00000261517 SERPINC1P01008 464 aa4.99□□□□□ -1.61
VPS13C-202ENST00000261517 STX1AQ16623 288 aa4.99□□□□□ -1.61
VPS13C-202ENST00000261517 SSH1Q8WYL5 1049 aa4.99□□□□□ -1.61
VPS13C-202ENST00000261517 CALML4Q96GE6 196 aa4.99□□□□□ -1.61
VPS13C-202ENST00000261517 RAI14Q9P0K7 980 aa4.99□□□□□ -1.61
VPS13C-202ENST00000261517 BRAPQ7Z569 592 aa4.99□□□□□ -1.61
VPS13C-202ENST00000261517 LLPHQ9BRT6 129 aaKnown RBP4.99□□□□□ -1.61
VPS13C-202ENST00000261517 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.99□□□□□ -1.612e-6■■□□□ 13.1
VPS13C-202ENST00000261517 MED14O60244 1454 aa4.99□□□□□ -1.61
VPS13C-202ENST00000261517 C8orf76Q96K31 380 aa4.99□□□□□ -1.61
VPS13C-202ENST00000261517 SRRTQ9BXP5 876 aaKnown RBP4.99□□□□□ -1.61
VPS13C-202ENST00000261517 UPF3BQ9BZI7 483 aaKnown RBP4.99□□□□□ -1.61
VPS13C-202ENST00000261517 UBE2HP62256 183 aa4.99□□□□□ -1.61
VPS13C-202ENST00000261517 ANKRD44Q8N8A2 993 aa4.99□□□□□ -1.61
VPS13C-202ENST00000261517 JAKMIP1Q96N16 626 aaKnown RBP4.99□□□□□ -1.61
VPS13C-202ENST00000261517 DKC1O60832 514 aaKnown RBP eCLIP4.99□□□□□ -1.61
VPS13C-202ENST00000261517 PDE6BP35913 854 aa4.99□□□□□ -1.61
VPS13C-202ENST00000261517 SPA17Q15506 151 aa4.99□□□□□ -1.61
VPS13C-202ENST00000261517 TTC22Q5TAA0 569 aa4.99□□□□□ -1.61
VPS13C-202ENST00000261517 TNPO1Q92973 898 aaKnown RBP4.99□□□□□ -1.61
VPS13C-202ENST00000261517 DIP2AQ14689 1571 aa4.98□□□□□ -1.61
VPS13C-202ENST00000261517 GRIPAP1Q4V328 841 aa4.98□□□□□ -1.61
VPS13C-202ENST00000261517 NOL8Q76FK4 1167 aaKnown RBP4.98□□□□□ -1.61
VPS13C-202ENST00000261517 CNPY4Q8N129 248 aa4.98□□□□□ -1.61
VPS13C-202ENST00000261517 CABP5Q9NP86 173 aa4.98□□□□□ -1.61
VPS13C-202ENST00000261517 ITSN1Q15811 1721 aa4.98□□□□□ -1.61
VPS13C-202ENST00000261517 FERMT2Q96AC1 680 aa4.98□□□□□ -1.61
VPS13C-202ENST00000261517 SUPT20HQ8NEM7 779 aa4.98□□□□□ -1.61
VPS13C-202ENST00000261517 ESR2Q92731 530 aa4.98□□□□□ -1.61
VPS13C-202ENST00000261517 ABCD1P33897 745 aa4.98□□□□□ -1.61
VPS13C-202ENST00000261517 ANKRD13DQ6ZTN6 518 aa4.98□□□□□ -1.61
VPS13C-202ENST00000261517 TAF4BQ92750 862 aa4.98□□□□□ -1.61
VPS13C-202ENST00000261517 A6NNZ2 444 aa4.98□□□□□ -1.61
VPS13C-202ENST00000261517 ZNF76P36508 570 aa4.98□□□□□ -1.61
VPS13C-202ENST00000261517 TUBB8Q3ZCM7 444 aa4.98□□□□□ -1.61
VPS13C-202ENST00000261517 PLEKHG3A1L390 1219 aa4.98□□□□□ -1.61
VPS13C-202ENST00000261517 ALS2CR12Q96Q35 445 aa4.98□□□□□ -1.61
VPS13C-202ENST00000261517 GIGYF2Q6Y7W6 1299 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms