RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 RWDD1Q9H446 243 aaPredicted RBP23.25■■□□□ 1.31
COL4A3BP-201ENST00000261415 COL15A1P39059 1388 aa23.25■■□□□ 1.31
COL4A3BP-201ENST00000261415 SCN7AQ01118 1682 aa23.25■■□□□ 1.31
COL4A3BP-201ENST00000261415 GNAI2P04899 355 aa23.25■■□□□ 1.31
COL4A3BP-201ENST00000261415 NBPF7P0C2Y1 421 aaPredicted RBP23.25■■□□□ 1.31
COL4A3BP-201ENST00000261415 HDAC1Q13547 482 aaPredicted RBP23.25■■□□□ 1.31
COL4A3BP-201ENST00000261415 DZIP3Q86Y13 1208 aaKnown RBP23.25■■□□□ 1.31
COL4A3BP-201ENST00000261415 TRIM44Q96DX7 344 aaPredicted RBP23.25■■□□□ 1.31
COL4A3BP-201ENST00000261415 ATP5J2-PTCD1G3V325 749 aa23.24■■□□□ 1.31
COL4A3BP-201ENST00000261415 RC3H1Q5TC82 1133 aaKnown RBP23.24■■□□□ 1.31
COL4A3BP-201ENST00000261415 SMAP1Q8IYB5 467 aaPredicted RBP23.24■■□□□ 1.31
COL4A3BP-201ENST00000261415 LRRC4BQ9NT99 713 aa23.24■■□□□ 1.31
COL4A3BP-201ENST00000261415 C9orf78Q9NZ63 289 aaPredicted RBP23.24■■□□□ 1.31
COL4A3BP-201ENST00000261415 GCKRQ14397 625 aa23.23■■□□□ 1.31
COL4A3BP-201ENST00000261415 TBC1D2BQ9UPU7 963 aa23.23■■□□□ 1.31
COL4A3BP-201ENST00000261415 SLC27A3Q5K4L6 730 aa23.22■■□□□ 1.31
COL4A3BP-201ENST00000261415 SIRT2Q8IXJ6 389 aa23.22■■□□□ 1.31
COL4A3BP-201ENST00000261415 ANTXR1Q9H6X2 564 aa23.22■■□□□ 1.31
COL4A3BP-201ENST00000261415 GRM8O00222 908 aa23.22■■□□□ 1.31
COL4A3BP-201ENST00000261415 CEP85Q6P2H3 762 aa23.22■■□□□ 1.31
COL4A3BP-201ENST00000261415 GIGYF2Q6Y7W6 1299 aaKnown RBP23.22■■□□□ 1.31
COL4A3BP-201ENST00000261415 LRRFIP2Q9Y608 721 aaKnown RBP23.22■■□□□ 1.31
COL4A3BP-201ENST00000261415 UTYO14607 1347 aa23.21■■□□□ 1.31
COL4A3BP-201ENST00000261415 ERVV-1B6SEH8 477 aa23.21■■□□□ 1.31
COL4A3BP-201ENST00000261415 APBA3O96018 575 aa23.21■■□□□ 1.31
COL4A3BP-201ENST00000261415 TCIRG1Q13488 830 aa23.21■■□□□ 1.31
COL4A3BP-201ENST00000261415 HLFQ16534 295 aa23.21■■□□□ 1.31
COL4A3BP-201ENST00000261415 RPAP2Q8IXW5 612 aaPredicted RBP23.21■■□□□ 1.31
COL4A3BP-201ENST00000261415 ANKRD44Q8N8A2 993 aa23.21■■□□□ 1.31
COL4A3BP-201ENST00000261415 PLSCR1O15162 318 aa23.2■■□□□ 1.3
COL4A3BP-201ENST00000261415 GNPATO15228 680 aa23.19■■□□□ 1.3
COL4A3BP-201ENST00000261415 RPS6KA4O75676 772 aa23.19■■□□□ 1.3
COL4A3BP-201ENST00000261415 TXNRD1Q16881 649 aa23.19■■□□□ 1.3
COL4A3BP-201ENST00000261415 ISCA1Q9BUE6 129 aa23.19■■□□□ 1.3
COL4A3BP-201ENST00000261415 TUBGCP6Q96RT7 1819 aa23.19■■□□□ 1.3
COL4A3BP-201ENST00000261415 NCLP19338 710 aaKnown RBP23.19■■□□□ 1.3
COL4A3BP-201ENST00000261415 KIAA1211Q6ZU35 1233 aa23.19■■□□□ 1.3
COL4A3BP-201ENST00000261415 MYH3P11055 1940 aa23.18■■□□□ 1.3
COL4A3BP-201ENST00000261415 PROM2Q8N271 834 aa23.18■■□□□ 1.3
COL4A3BP-201ENST00000261415 CCDC191Q8NCU4 936 aa23.18■■□□□ 1.3
COL4A3BP-201ENST00000261415 SLKQ9H2G2 1235 aaPredicted RBP23.18■■□□□ 1.3
COL4A3BP-201ENST00000261415 GRPEL1Q9HAV7 217 aa23.18■■□□□ 1.3
COL4A3BP-201ENST00000261415 CWC25Q9NXE8 425 aaPredicted RBP23.18■■□□□ 1.3
COL4A3BP-201ENST00000261415 CAMTA2O94983 1202 aa23.17■■□□□ 1.3
COL4A3BP-201ENST00000261415 HSP90AB3PQ58FF7 597 aa23.17■■□□□ 1.3
COL4A3BP-201ENST00000261415 MTERF4Q7Z6M4 381 aaKnown RBP23.17■■□□□ 1.3
COL4A3BP-201ENST00000261415 A0A087WZG4 1122 aa23.17■■□□□ 1.3
COL4A3BP-201ENST00000261415 MCM4P33991 863 aa23.17■■□□□ 1.3
COL4A3BP-201ENST00000261415 RTCBQ9Y3I0 505 aaKnown RBP23.16■■□□□ 1.3
COL4A3BP-201ENST00000261415 TRIM28Q13263 835 aaKnown RBP23.16■■□□□ 1.3
COL4A3BP-201ENST00000261415 AK7Q96M32 723 aa23.16■■□□□ 1.3
COL4A3BP-201ENST00000261415 HDAC5Q9UQL6 1122 aa23.16■■□□□ 1.3
COL4A3BP-201ENST00000261415 SMIM5Q71RC9 77 aa23.15■■□□□ 1.3
COL4A3BP-201ENST00000261415 UBE3BQ7Z3V4 1068 aa23.15■■□□□ 1.3
COL4A3BP-201ENST00000261415 AMIGO3Q86WK7 504 aa23.15■■□□□ 1.3
COL4A3BP-201ENST00000261415 SUCLG2Q96I99 432 aa23.14■■□□□ 1.29
COL4A3BP-201ENST00000261415 GPTP24298 496 aa23.13■■□□□ 1.29
COL4A3BP-201ENST00000261415 SMC5Q8IY18 1101 aa23.13■■□□□ 1.29
COL4A3BP-201ENST00000261415 HMMRO75330 724 aa23.13■■□□□ 1.29
COL4A3BP-201ENST00000261415 CASP7P55210 303 aa23.13■■□□□ 1.29
COL4A3BP-201ENST00000261415 ATP8B2P98198 1209 aa23.13■■□□□ 1.29
COL4A3BP-201ENST00000261415 JARID2Q92833 1246 aaPredicted RBP23.13■■□□□ 1.29
COL4A3BP-201ENST00000261415 KAZALD1Q96I82 304 aa23.13■■□□□ 1.29
COL4A3BP-201ENST00000261415 PNMA6EA0A0J9YXQ4 647 aa23.12■■□□□ 1.29
COL4A3BP-201ENST00000261415 H7C1W4 665 aa23.12■■□□□ 1.29
COL4A3BP-201ENST00000261415 HMGB2P26583 209 aaKnown RBP23.12■■□□□ 1.29
COL4A3BP-201ENST00000261415 CASZ1Q86V15 1759 aa23.12■■□□□ 1.29
COL4A3BP-201ENST00000261415 NLRP10Q86W26 655 aa23.11■■□□□ 1.29
COL4A3BP-201ENST00000261415 ZNF34Q8IZ26 560 aa23.11■■□□□ 1.29
COL4A3BP-201ENST00000261415 LAMB2P55268 1798 aa23.11■■□□□ 1.29
COL4A3BP-201ENST00000261415 COL24A1Q17RW2 1714 aa23.11■■□□□ 1.29
COL4A3BP-201ENST00000261415 UBN2Q6ZU65 1347 aa23.11■■□□□ 1.29
COL4A3BP-201ENST00000261415 TRAK2O60296 914 aa23.11■■□□□ 1.29
COL4A3BP-201ENST00000261415 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.11■■□□□ 1.29
COL4A3BP-201ENST00000261415 GCC1Q96CN9 775 aa23.11■■□□□ 1.29
COL4A3BP-201ENST00000261415 NARFQ9UHQ1 456 aa23.11■■□□□ 1.29
COL4A3BP-201ENST00000261415 ZNF652Q9Y2D9 606 aa23.11■■□□□ 1.29
COL4A3BP-201ENST00000261415 OFD1O75665 1012 aa23.1■■□□□ 1.29
COL4A3BP-201ENST00000261415 PDIA4P13667 645 aaKnown RBP23.1■■□□□ 1.29
COL4A3BP-201ENST00000261415 PPP1R42Q7Z4L9 355 aa23.1■■□□□ 1.29
COL4A3BP-201ENST00000261415 BICC1Q9H694 974 aaKnown RBP23.1■■□□□ 1.29
COL4A3BP-201ENST00000261415 PHF14O94880 888 aa23.1■■□□□ 1.29
COL4A3BP-201ENST00000261415 MTX1Q13505 466 aa23.1■■□□□ 1.29
COL4A3BP-201ENST00000261415 ARHGEF1Q92888 912 aaKnown RBP23.1■■□□□ 1.29
COL4A3BP-201ENST00000261415 GZF1Q9H116 711 aaPredicted RBP23.1■■□□□ 1.29
COL4A3BP-201ENST00000261415 CLEC4GQ6UXB4 293 aa23.09■■□□□ 1.29
COL4A3BP-201ENST00000261415 DCTPP1Q9H773 170 aa23.09■■□□□ 1.29
COL4A3BP-201ENST00000261415 DDX60Q8IY21 1712 aaKnown RBP23.09■■□□□ 1.29
COL4A3BP-201ENST00000261415 RGL2O15211 777 aa23.08■■□□□ 1.29
COL4A3BP-201ENST00000261415 TRAPPC3LQ5T215 181 aa23.08■■□□□ 1.29
COL4A3BP-201ENST00000261415 UTP14CQ5TAP6 766 aaKnown RBP23.08■■□□□ 1.29
COL4A3BP-201ENST00000261415 SSH3Q8TE77 659 aa23.08■■□□□ 1.29
COL4A3BP-201ENST00000261415 SRGAP3O43295 1099 aa23.08■■□□□ 1.29
COL4A3BP-201ENST00000261415 ADRA2BP18089 450 aa23.08■■□□□ 1.29
COL4A3BP-201ENST00000261415 SRP68Q9UHB9 627 aaKnown RBP23.08■■□□□ 1.29
COL4A3BP-201ENST00000261415 PDZRN3Q9UPQ7 1066 aa23.08■■□□□ 1.29
COL4A3BP-201ENST00000261415 PCCAP05165 728 aaPredicted RBP23.07■■□□□ 1.28
COL4A3BP-201ENST00000261415 EPHA10Q5JZY3 1008 aa23.07■■□□□ 1.28
COL4A3BP-201ENST00000261415 USPL1Q5W0Q7 1092 aa23.07■■□□□ 1.28
COL4A3BP-201ENST00000261415 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms