RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 PPP1R42Q7Z4L9 355 aa26.19■■□□□ 1.78
RTCA-201ENST00000260563 NBPF5PQ86XG9 351 aaPredicted RBP26.19■■□□□ 1.78
RTCA-201ENST00000260563 TNNQ9UQP3 1299 aa26.19■■□□□ 1.78
RTCA-201ENST00000260563 ANKRD31Q8N7Z5 1873 aa26.18■■□□□ 1.78
RTCA-201ENST00000260563 NPHP1O15259 732 aa26.18■■□□□ 1.78
RTCA-201ENST00000260563 IGKV5-2P06315 115 aa26.18■■□□□ 1.78
RTCA-201ENST00000260563 TRIM28Q13263 835 aaKnown RBP26.18■■□□□ 1.78
RTCA-201ENST00000260563 CWF19L2Q2TBE0 894 aaKnown RBP26.18■■□□□ 1.78
RTCA-201ENST00000260563 DZIP1LQ8IYY4 767 aaKnown RBP26.18■■□□□ 1.78
RTCA-201ENST00000260563 CCDC191Q8NCU4 936 aa26.18■■□□□ 1.78
RTCA-201ENST00000260563 LINS1Q8NG48 757 aa26.18■■□□□ 1.78
RTCA-201ENST00000260563 NYXQ9GZU5 481 aa26.18■■□□□ 1.78
RTCA-201ENST00000260563 ABCC4O15439 1325 aa26.17■■□□□ 1.78
RTCA-201ENST00000260563 DDX60Q8IY21 1712 aaKnown RBP26.17■■□□□ 1.78
RTCA-201ENST00000260563 NEURL1BA8MQ27 555 aa26.17■■□□□ 1.78
RTCA-201ENST00000260563 BEND3Q5T5X7 828 aa26.17■■□□□ 1.78
RTCA-201ENST00000260563 SUSD4Q5VX71 490 aa26.17■■□□□ 1.78
RTCA-201ENST00000260563 FTSJ3Q8IY81 847 aaKnown RBP26.17■■□□□ 1.78
RTCA-201ENST00000260563 CNBD1Q8NA66 436 aa26.17■■□□□ 1.78
RTCA-201ENST00000260563 CLUAP1Q96AJ1 413 aa26.17■■□□□ 1.78
RTCA-201ENST00000260563 CWC25Q9NXE8 425 aaPredicted RBP26.17■■□□□ 1.78
RTCA-201ENST00000260563 PANK1Q8TE04 598 aa26.16■■□□□ 1.78
RTCA-201ENST00000260563 SRCIN1Q9C0H9 1055 aa26.16■■□□□ 1.78
RTCA-201ENST00000260563 MYH3P11055 1940 aa26.15■■□□□ 1.78
RTCA-201ENST00000260563 NTSR2O95665 410 aa26.15■■□□□ 1.78
RTCA-201ENST00000260563 TPTE2Q6XPS3 522 aa26.15■■□□□ 1.78
RTCA-201ENST00000260563 UTP14AQ9BVJ6 771 aaKnown RBP26.15■■□□□ 1.78
RTCA-201ENST00000260563 C10orf71Q711Q0 1435 aa26.14■■□□□ 1.78
RTCA-201ENST00000260563 TNRC6CQ9HCJ0 1690 aaKnown RBP26.14■■□□□ 1.77
RTCA-201ENST00000260563 RLBP1P12271 317 aa26.14■■□□□ 1.77
RTCA-201ENST00000260563 GTF2E1P29083 439 aaPredicted RBP26.14■■□□□ 1.77
RTCA-201ENST00000260563 ST5P78524 1137 aa26.14■■□□□ 1.77
RTCA-201ENST00000260563 PRR5LQ6MZQ0 368 aa26.14■■□□□ 1.77
RTCA-201ENST00000260563 CRBNQ96SW2 442 aa26.14■■□□□ 1.77
RTCA-201ENST00000260563 TRMT112Q9UI30 125 aaKnown RBP26.14■■□□□ 1.77
RTCA-201ENST00000260563 ALDH1L1O75891 902 aa26.13■■□□□ 1.77
RTCA-201ENST00000260563 CCT4P50991 539 aaKnown RBP26.13■■□□□ 1.77
RTCA-201ENST00000260563 NUTM1Q86Y26 1132 aa26.12■■□□□ 1.77
RTCA-201ENST00000260563 PPP1R1BQ9UD71 204 aaPredicted RBP26.12■■□□□ 1.77
RTCA-201ENST00000260563 GCKRQ14397 625 aa26.11■■□□□ 1.77
RTCA-201ENST00000260563 ERICH6BQ5W0A0 696 aa26.11■■□□□ 1.77
RTCA-201ENST00000260563 SH3TC1Q8TE82 1336 aa26.11■■□□□ 1.77
RTCA-201ENST00000260563 ABCC12Q96J65 1359 aa26.1■■□□□ 1.77
RTCA-201ENST00000260563 COL11A2P13942 1736 aaPredicted RBP26.1■■□□□ 1.77
RTCA-201ENST00000260563 EXOC6Q8TAG9 804 aa26.1■■□□□ 1.77
RTCA-201ENST00000260563 COG6Q9Y2V7 657 aa26.1■■□□□ 1.77
RTCA-201ENST00000260563 DLEC1Q9Y238 1755 aa26.1■■□□□ 1.77
RTCA-201ENST00000260563 KIAA1551Q9HCM1 1747 aa26.1■■□□□ 1.77
RTCA-201ENST00000260563 ERFEQ4G0M1 354 aa26.09■■□□□ 1.77
RTCA-201ENST00000260563 ZBTB38Q8NAP3 1195 aaPredicted RBP26.09■■□□□ 1.77
RTCA-201ENST00000260563 PCCAP05165 728 aaPredicted RBP26.09■■□□□ 1.77
RTCA-201ENST00000260563 INTS3Q68E01 1043 aaKnown RBP26.09■■□□□ 1.77
RTCA-201ENST00000260563 KLHL34Q8N239 644 aa26.09■■□□□ 1.77
RTCA-201ENST00000260563 CCDC24Q8N4L8 307 aa26.09■■□□□ 1.77
RTCA-201ENST00000260563 TMEM57Q8N5G2 664 aa26.09■■□□□ 1.77
RTCA-201ENST00000260563 RIC1Q4ADV7 1423 aa26.08■■□□□ 1.77
RTCA-201ENST00000260563 MVPQ14764 893 aaKnown RBP26.08■■□□□ 1.77
RTCA-201ENST00000260563 RTL5Q5HYW3 569 aaPredicted RBP26.08■■□□□ 1.77
RTCA-201ENST00000260563 FAM89AQ96GI7 184 aa26.08■■□□□ 1.77
RTCA-201ENST00000260563 C9orf78Q9NZ63 289 aaPredicted RBP26.07■■□□□ 1.76
RTCA-201ENST00000260563 CACNA1SQ13698 1873 aa26.06■■□□□ 1.76
RTCA-201ENST00000260563 ITPRIPQ8IWB1 547 aa26.06■■□□□ 1.76
RTCA-201ENST00000260563 GRM8O00222 908 aa26.05■■□□□ 1.76
RTCA-201ENST00000260563 UBE3BQ7Z3V4 1068 aa26.05■■□□□ 1.76
RTCA-201ENST00000260563 CDHR2Q9BYE9 1310 aa26.05■■□□□ 1.76
RTCA-201ENST00000260563 SYNE4Q8N205 404 aa26.04■■□□□ 1.76
RTCA-201ENST00000260563 BRIP1Q9BX63 1249 aa26.04■■□□□ 1.76
RTCA-201ENST00000260563 BRCA1P38398 1863 aaKnown RBP26.04■■□□□ 1.76
RTCA-201ENST00000260563 H7C1W4 665 aa26.04■■□□□ 1.76
RTCA-201ENST00000260563 IRS4O14654 1257 aaPredicted RBP26.04■■□□□ 1.76
RTCA-201ENST00000260563 JARID2Q92833 1246 aaPredicted RBP26.04■■□□□ 1.76
RTCA-201ENST00000260563 CD2APQ9Y5K6 639 aa26.04■■□□□ 1.76
RTCA-201ENST00000260563 SRCAPQ6ZRS2 3230 aa26.03■■□□□ 1.76
RTCA-201ENST00000260563 HSP90B1P14625 803 aaKnown RBP26.03■■□□□ 1.76
RTCA-201ENST00000260563 DDX19BQ9UMR2 479 aa26.03■■□□□ 1.76
RTCA-201ENST00000260563 HCLS1P14317 486 aaPredicted RBP26.02■■□□□ 1.76
RTCA-201ENST00000260563 PDE6BP35913 854 aa26.02■■□□□ 1.76
RTCA-201ENST00000260563 SLC10A5Q5PT55 438 aa26.02■■□□□ 1.76
RTCA-201ENST00000260563 FHDC1Q9C0D6 1143 aaPredicted RBP26.02■■□□□ 1.76
RTCA-201ENST00000260563 UTYO14607 1347 aa26.01■■□□□ 1.75
RTCA-201ENST00000260563 CASP7P55210 303 aa26■■□□□ 1.75
RTCA-201ENST00000260563 USP44Q9H0E7 712 aa26■■□□□ 1.75
RTCA-201ENST00000260563 NBPF7P0C2Y1 421 aaPredicted RBP25.99■■□□□ 1.75
RTCA-201ENST00000260563 NLRP3Q96P20 1036 aa25.99■■□□□ 1.75
RTCA-201ENST00000260563 PDZRN3Q9UPQ7 1066 aa25.98■■□□□ 1.75
RTCA-201ENST00000260563 PDE8AO60658 829 aa25.98■■□□□ 1.75
RTCA-201ENST00000260563 TGFB2P61812 414 aa25.98■■□□□ 1.75
RTCA-201ENST00000260563 MEIS3Q99687 375 aa25.98■■□□□ 1.75
RTCA-201ENST00000260563 UBTFL1P0CB47 393 aaPredicted RBP25.97■■□□□ 1.75
RTCA-201ENST00000260563 PLA2G12BQ9BX93 195 aa25.97■■□□□ 1.75
RTCA-201ENST00000260563 AAMPQ13685 434 aa25.96■■□□□ 1.75
RTCA-201ENST00000260563 C2CD5Q86YS7 1000 aa25.96■■□□□ 1.75
RTCA-201ENST00000260563 CHMP4BQ9H444 224 aaKnown RBP25.96■■□□□ 1.75
RTCA-201ENST00000260563 TAF1P21675 1872 aa25.96■■□□□ 1.75
RTCA-201ENST00000260563 SPEF2Q9C093 1822 aa25.95■■□□□ 1.74
RTCA-201ENST00000260563 KLRG2A4D1S0 409 aaPredicted RBP25.95■■□□□ 1.74
RTCA-201ENST00000260563 H0YIN7 160 aa25.95■■□□□ 1.74
RTCA-201ENST00000260563 GNAI3P08754 354 aa25.95■■□□□ 1.74
RTCA-201ENST00000260563 C3orf67Q6ZVT6 689 aa25.95■■□□□ 1.74
RTCA-201ENST00000260563 PPP4R2Q9NY27 417 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms