RNA–Protein interactions for RNA: ENST00000258052.7

SMPD2-201, Transcript of sphingomyelin phosphodiesterase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD2, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2-201ENST00000258052 LRRC4BQ9NT99 713 aa26.3■■□□□ 1.8
SMPD2-201ENST00000258052 PCCAP05165 728 aaPredicted RBP26.28■■□□□ 1.8
SMPD2-201ENST00000258052 ZNF34Q8IZ26 560 aa26.28■■□□□ 1.8
SMPD2-201ENST00000258052 LRRCC1Q9C099 1032 aa26.28■■□□□ 1.8
SMPD2-201ENST00000258052 RABL6Q3YEC7 729 aaPredicted RBP26.28■■□□□ 1.8
SMPD2-201ENST00000258052 SLC27A3Q5K4L6 730 aa26.28■■□□□ 1.8
SMPD2-201ENST00000258052 SMIM5Q71RC9 77 aa26.28■■□□□ 1.8
SMPD2-201ENST00000258052 ZBTB38Q8NAP3 1195 aaPredicted RBP26.28■■□□□ 1.8
SMPD2-201ENST00000258052 RTCBQ9Y3I0 505 aaKnown RBP26.28■■□□□ 1.8
SMPD2-201ENST00000258052 RAB11FIP3O75154 756 aa26.27■■□□□ 1.8
SMPD2-201ENST00000258052 FOXO4P98177 505 aa26.27■■□□□ 1.8
SMPD2-201ENST00000258052 FAM89AQ96GI7 184 aa26.27■■□□□ 1.8
SMPD2-201ENST00000258052 AK7Q96M32 723 aa26.27■■□□□ 1.8
SMPD2-201ENST00000258052 ZNF652Q9Y2D9 606 aa26.27■■□□□ 1.8
SMPD2-201ENST00000258052 HSP90AB4PQ58FF6 505 aa26.26■■□□□ 1.79
SMPD2-201ENST00000258052 PA2G4Q9UQ80 394 aaKnown RBP26.26■■□□□ 1.79
SMPD2-201ENST00000258052 UBN2Q6ZU65 1347 aa26.26■■□□□ 1.79
SMPD2-201ENST00000258052 OS9Q13438 667 aaPredicted RBP26.25■■□□□ 1.79
SMPD2-201ENST00000258052 LMBR1LQ6UX01 489 aa26.25■■□□□ 1.79
SMPD2-201ENST00000258052 C16orf71Q8IYS4 520 aaPredicted RBP26.25■■□□□ 1.79
SMPD2-201ENST00000258052 NOP58Q9Y2X3 529 aaKnown RBP26.25■■□□□ 1.79
SMPD2-201ENST00000258052 SCN7AQ01118 1682 aa26.25■■□□□ 1.79
SMPD2-201ENST00000258052 TRMT112Q9UI30 125 aaKnown RBP26.25■■□□□ 1.79
SMPD2-201ENST00000258052 APBA3O96018 575 aa26.24■■□□□ 1.79
SMPD2-201ENST00000258052 CHMP3Q9Y3E7 222 aa26.24■■□□□ 1.79
SMPD2-201ENST00000258052 NIP7Q9Y221 180 aaKnown RBP eCLIP26.23■■□□□ 1.79
SMPD2-201ENST00000258052 CDHR2Q9BYE9 1310 aa26.23■■□□□ 1.79
SMPD2-201ENST00000258052 TXNRD1Q16881 649 aa26.22■■□□□ 1.79
SMPD2-201ENST00000258052 FAM161AQ3B820 660 aa26.22■■□□□ 1.79
SMPD2-201ENST00000258052 CLEC4GQ6UXB4 293 aa26.22■■□□□ 1.79
SMPD2-201ENST00000258052 RHPN1Q8TCX5 695 aa26.22■■□□□ 1.79
SMPD2-201ENST00000258052 NARFQ9UHQ1 456 aa26.22■■□□□ 1.79
SMPD2-201ENST00000258052 EP400Q96L91 3159 aa26.21■■□□□ 1.79
SMPD2-201ENST00000258052 PARP10Q53GL7 1025 aa26.21■■□□□ 1.79
SMPD2-201ENST00000258052 AMIGO3Q86WK7 504 aa26.21■■□□□ 1.79
SMPD2-201ENST00000258052 PLEKHM2Q8IWE5 1019 aa26.21■■□□□ 1.79
SMPD2-201ENST00000258052 KIF1BPQ96EK5 621 aa26.21■■□□□ 1.79
SMPD2-201ENST00000258052 PHF14O94880 888 aa26.21■■□□□ 1.79
SMPD2-201ENST00000258052 SUSD4Q5VX71 490 aa26.21■■□□□ 1.79
SMPD2-201ENST00000258052 USPL1Q5W0Q7 1092 aa26.21■■□□□ 1.79
SMPD2-201ENST00000258052 SYNE4Q8N205 404 aa26.21■■□□□ 1.79
SMPD2-201ENST00000258052 KLHDC4Q8TBB5 520 aa26.21■■□□□ 1.79
SMPD2-201ENST00000258052 OTUD7AQ8TE49 926 aaPredicted RBP26.21■■□□□ 1.79
SMPD2-201ENST00000258052 BACH2Q9BYV9 841 aa26.21■■□□□ 1.79
SMPD2-201ENST00000258052 C4AP0C0L4 1744 aa26.2■■□□□ 1.78
SMPD2-201ENST00000258052 TNS1Q9HBL0 1735 aaKnown RBP26.2■■□□□ 1.78
SMPD2-201ENST00000258052 FAM177BA6PVY3 158 aa26.2■■□□□ 1.78
SMPD2-201ENST00000258052 PLSCR1O15162 318 aa26.2■■□□□ 1.78
SMPD2-201ENST00000258052 ZPR1O75312 459 aa26.2■■□□□ 1.78
SMPD2-201ENST00000258052 RFX5P48382 616 aaPredicted RBP26.2■■□□□ 1.78
SMPD2-201ENST00000258052 G3BP1Q13283 466 aaKnown RBP eCLIP26.2■■□□□ 1.78
SMPD2-201ENST00000258052 ARHGEF1Q92888 912 aaKnown RBP26.2■■□□□ 1.78
SMPD2-201ENST00000258052 PLA2G12BQ9BX93 195 aa26.2■■□□□ 1.78
SMPD2-201ENST00000258052 IL1RAPL2Q9NP60 686 aa26.2■■□□□ 1.78
SMPD2-201ENST00000258052 SRP68Q9UHB9 627 aaKnown RBP26.2■■□□□ 1.78
SMPD2-201ENST00000258052 UBR3Q6ZT12 1888 aa26.19■■□□□ 1.78
SMPD2-201ENST00000258052 TRAPPC3LQ5T215 181 aa26.19■■□□□ 1.78
SMPD2-201ENST00000258052 ERC1Q8IUD2 1116 aa26.19■■□□□ 1.78
SMPD2-201ENST00000258052 PROM2Q8N271 834 aa26.19■■□□□ 1.78
SMPD2-201ENST00000258052 UTP14AQ9BVJ6 771 aaKnown RBP26.19■■□□□ 1.78
SMPD2-201ENST00000258052 SIL1Q9H173 461 aa26.19■■□□□ 1.78
SMPD2-201ENST00000258052 IRS4O14654 1257 aaPredicted RBP26.18■■□□□ 1.78
SMPD2-201ENST00000258052 RGL2O15211 777 aa26.18■■□□□ 1.78
SMPD2-201ENST00000258052 MYH3P11055 1940 aa26.18■■□□□ 1.78
SMPD2-201ENST00000258052 C8orf34Q49A92 452 aa26.17■■□□□ 1.78
SMPD2-201ENST00000258052 BCL2L12Q9HB09 334 aa26.17■■□□□ 1.78
SMPD2-201ENST00000258052 COPRSQ9NQ92 184 aa26.17■■□□□ 1.78
SMPD2-201ENST00000258052 HMGB2P26583 209 aaKnown RBP26.17■■□□□ 1.78
SMPD2-201ENST00000258052 RFC4P35249 363 aa26.17■■□□□ 1.78
SMPD2-201ENST00000258052 PTPN12Q05209 780 aaKnown RBP26.17■■□□□ 1.78
SMPD2-201ENST00000258052 SH3TC1Q8TE82 1336 aa26.16■■□□□ 1.78
SMPD2-201ENST00000258052 BICDL1Q6ZP65 573 aa26.15■■□□□ 1.78
SMPD2-201ENST00000258052 PDE8AO60658 829 aa26.14■■□□□ 1.78
SMPD2-201ENST00000258052 ADRA2BP18089 450 aa26.14■■□□□ 1.78
SMPD2-201ENST00000258052 TBC1D9BQ66K14 1250 aa26.14■■□□□ 1.78
SMPD2-201ENST00000258052 USP42Q9H9J4 1324 aaKnown RBP26.14■■□□□ 1.77
SMPD2-201ENST00000258052 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.14■■□□□ 1.77
SMPD2-201ENST00000258052 NTSR2O95665 410 aa26.14■■□□□ 1.77
SMPD2-201ENST00000258052 CSF1RP07333 972 aa26.14■■□□□ 1.77
SMPD2-201ENST00000258052 CCDC85AQ96PX6 553 aaPredicted RBP26.14■■□□□ 1.77
SMPD2-201ENST00000258052 SASH1O94885 1247 aa26.13■■□□□ 1.77
SMPD2-201ENST00000258052 CTSWP56202 376 aa26.13■■□□□ 1.77
SMPD2-201ENST00000258052 CCDC57Q2TAC2 916 aa26.13■■□□□ 1.77
SMPD2-201ENST00000258052 BMP2KLQ5H9B9 411 aa26.12■■□□□ 1.77
SMPD2-201ENST00000258052 NUTM1Q86Y26 1132 aa26.12■■□□□ 1.77
SMPD2-201ENST00000258052 CLASRPQ8N2M8 674 aaKnown RBP26.12■■□□□ 1.77
SMPD2-201ENST00000258052 RBM19Q9Y4C8 960 aaKnown RBP26.12■■□□□ 1.77
SMPD2-201ENST00000258052 SALL3Q9BXA9 1300 aa26.12■■□□□ 1.77
SMPD2-201ENST00000258052 MX1P20591 662 aa26.11■■□□□ 1.77
SMPD2-201ENST00000258052 PDE1AP54750 535 aa26.11■■□□□ 1.77
SMPD2-201ENST00000258052 TTC22Q5TAA0 569 aa26.11■■□□□ 1.77
SMPD2-201ENST00000258052 TTLL11Q8NHH1 800 aa26.11■■□□□ 1.77
SMPD2-201ENST00000258052 RGPD3A6NKT7 1758 aaPredicted RBP26.11■■□□□ 1.77
SMPD2-201ENST00000258052 RGPD4Q7Z3J3 1758 aa26.11■■□□□ 1.77
SMPD2-201ENST00000258052 DDX60Q8IY21 1712 aaKnown RBP26.11■■□□□ 1.77
SMPD2-201ENST00000258052 LAMB2P55268 1798 aa26.11■■□□□ 1.77
SMPD2-201ENST00000258052 HCLS1P14317 486 aaPredicted RBP26.1■■□□□ 1.77
SMPD2-201ENST00000258052 SSFA2P28290 1259 aa26.1■■□□□ 1.77
SMPD2-201ENST00000258052 ZNF594Q96JF6 807 aaPredicted RBP26.1■■□□□ 1.77
SMPD2-201ENST00000258052 SETDB2Q96T68 719 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms