RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 CARD10Q9BWT7 1032 aa13.52□□□□□ -0.24
PDE6B-201ENST00000255622 C9orf78Q9NZ63 289 aaPredicted RBP13.52□□□□□ -0.24
PDE6B-201ENST00000255622 GIGYF1O75420 1035 aaPredicted RBP13.52□□□□□ -0.25
PDE6B-201ENST00000255622 HOXB7P09629 217 aa13.52□□□□□ -0.25
PDE6B-201ENST00000255622 AIMP1Q12904 312 aaKnown RBP13.52□□□□□ -0.25
PDE6B-201ENST00000255622 C1orf141Q5JVX7 400 aa13.52□□□□□ -0.25
PDE6B-201ENST00000255622 ANKRD24Q8TF21 1146 aa13.52□□□□□ -0.25
PDE6B-201ENST00000255622 DBF4Q9UBU7 674 aaPredicted RBP13.52□□□□□ -0.25
PDE6B-201ENST00000255622 ZSCAN30Q86W11 494 aa13.51□□□□□ -0.25
PDE6B-201ENST00000255622 RNF214Q8ND24 703 aa13.51□□□□□ -0.25
PDE6B-201ENST00000255622 DDX54Q8TDD1 881 aaKnown RBP13.51□□□□□ -0.25
PDE6B-201ENST00000255622 AK2P54819 239 aa13.51□□□□□ -0.25
PDE6B-201ENST00000255622 EGFL6Q8IUX8 553 aa13.51□□□□□ -0.25
PDE6B-201ENST00000255622 ATP2B3Q16720 1220 aa13.51□□□□□ -0.25
PDE6B-201ENST00000255622 IL17RAQ96F46 866 aa13.51□□□□□ -0.25
PDE6B-201ENST00000255622 TMX1Q9H3N1 280 aa13.51□□□□□ -0.25
PDE6B-201ENST00000255622 RPAP1Q9BWH6 1393 aaPredicted RBP13.51□□□□□ -0.25
PDE6B-201ENST00000255622 IRF6O14896 467 aa13.5□□□□□ -0.25
PDE6B-201ENST00000255622 PTH1RQ03431 593 aa13.5□□□□□ -0.25
PDE6B-201ENST00000255622 ARHGEF25Q86VW2 580 aa13.5□□□□□ -0.25
PDE6B-201ENST00000255622 JARID2Q92833 1246 aaPredicted RBP13.5□□□□□ -0.25
PDE6B-201ENST00000255622 ADGRL3Q9HAR2 1447 aa13.5□□□□□ -0.25
PDE6B-201ENST00000255622 LRSAM1Q6UWE0 723 aa13.5□□□□□ -0.25
PDE6B-201ENST00000255622 RUFY3Q7L099 469 aa13.5□□□□□ -0.25
PDE6B-201ENST00000255622 LARGE1O95461 756 aa13.49□□□□□ -0.25
PDE6B-201ENST00000255622 TERF1P54274 439 aa13.49□□□□□ -0.25
PDE6B-201ENST00000255622 SEMA3FQ13275 785 aa13.49□□□□□ -0.25
PDE6B-201ENST00000255622 TTC14Q96N46 770 aa13.49□□□□□ -0.25
PDE6B-201ENST00000255622 ZBTB12Q9Y330 459 aaPredicted RBP13.49□□□□□ -0.25
PDE6B-201ENST00000255622 CASTP20810 708 aaKnown RBP13.49□□□□□ -0.25
PDE6B-201ENST00000255622 GEMIN8Q9NWZ8 242 aaKnown RBP13.49□□□□□ -0.25
PDE6B-201ENST00000255622 SLC39A6Q13433 755 aa13.49□□□□□ -0.25
PDE6B-201ENST00000255622 ADCK5Q3MIX3 580 aa13.49□□□□□ -0.25
PDE6B-201ENST00000255622 USP48Q86UV5 1035 aa13.49□□□□□ -0.25
PDE6B-201ENST00000255622 CLASRPQ8N2M8 674 aaKnown RBP13.49□□□□□ -0.25
PDE6B-201ENST00000255622 GPATCH11Q8N954 259 aa13.49□□□□□ -0.25
PDE6B-201ENST00000255622 SUCLG2Q96I99 432 aa13.49□□□□□ -0.25
PDE6B-201ENST00000255622 DIAPH3Q9NSV4 1193 aa13.49□□□□□ -0.25
PDE6B-201ENST00000255622 TCHHQ07283 1943 aa13.48□□□□□ -0.25
PDE6B-201ENST00000255622 AMOTQ4VCS5 1084 aa13.48□□□□□ -0.25
PDE6B-201ENST00000255622 KSR2Q6VAB6 950 aa13.48□□□□□ -0.25
PDE6B-201ENST00000255622 AACSQ86V21 672 aa13.48□□□□□ -0.25
PDE6B-201ENST00000255622 KLHDC4Q8TBB5 520 aa13.48□□□□□ -0.25
PDE6B-201ENST00000255622 KAZALD1Q96I82 304 aa13.48□□□□□ -0.25
PDE6B-201ENST00000255622 SIL1Q9H173 461 aa13.48□□□□□ -0.25
PDE6B-201ENST00000255622 GOLIM4O00461 696 aa13.48□□□□□ -0.25
PDE6B-201ENST00000255622 GLRX3O76003 335 aaKnown RBP13.48□□□□□ -0.25
PDE6B-201ENST00000255622 COL9A3Q14050 684 aaPredicted RBP13.48□□□□□ -0.25
PDE6B-201ENST00000255622 TLR7Q9NYK1 1049 aaKnown RBP13.48□□□□□ -0.25
PDE6B-201ENST00000255622 HSP90AB4PQ58FF6 505 aa13.47□□□□□ -0.25
PDE6B-201ENST00000255622 PRPF40BQ6NWY9 871 aaKnown RBP13.47□□□□□ -0.25
PDE6B-201ENST00000255622 TIGD1Q96MW7 591 aa13.47□□□□□ -0.25
PDE6B-201ENST00000255622 BICC1Q9H694 974 aaKnown RBP13.47□□□□□ -0.25
PDE6B-201ENST00000255622 CRYBG1Q9Y4K1 1723 aa13.47□□□□□ -0.25
PDE6B-201ENST00000255622 MBD3O95983 291 aa13.47□□□□□ -0.25
PDE6B-201ENST00000255622 IFIT2P09913 472 aaKnown RBP13.47□□□□□ -0.25
PDE6B-201ENST00000255622 ZC3H6P61129 1189 aaKnown RBP13.47□□□□□ -0.25
PDE6B-201ENST00000255622 MTX1Q13505 466 aa13.47□□□□□ -0.25
PDE6B-201ENST00000255622 PSMD1Q99460 953 aa13.47□□□□□ -0.25
PDE6B-201ENST00000255622 ECHDC1Q9NTX5 307 aa13.47□□□□□ -0.25
PDE6B-201ENST00000255622 CNPY2Q9Y2B0 182 aa13.47□□□□□ -0.25
PDE6B-201ENST00000255622 TTC41PQ6P2S7 1318 aa13.47□□□□□ -0.25
PDE6B-201ENST00000255622 USP42Q9H9J4 1324 aaKnown RBP13.47□□□□□ -0.25
PDE6B-201ENST00000255622 MYL6BP14649 208 aa13.47□□□□□ -0.25
PDE6B-201ENST00000255622 PIP4K2AP48426 406 aaPredicted RBP13.47□□□□□ -0.25
PDE6B-201ENST00000255622 CCDC8Q9H0W5 538 aaPredicted RBP13.47□□□□□ -0.25
PDE6B-201ENST00000255622 WDR33Q9C0J8 1336 aaKnown RBP13.46□□□□□ -0.25
PDE6B-201ENST00000255622 FAM227BQ96M60 508 aa13.46□□□□□ -0.25
PDE6B-201ENST00000255622 PHRF1Q9P1Y6 1649 aaKnown RBP13.46□□□□□ -0.25
PDE6B-201ENST00000255622 FAM177BA6PVY3 158 aa13.46□□□□□ -0.25
PDE6B-201ENST00000255622 SASH1O94885 1247 aa13.46□□□□□ -0.25
PDE6B-201ENST00000255622 JAKMIP1Q96N16 626 aaKnown RBP13.46□□□□□ -0.25
PDE6B-201ENST00000255622 SH3BP1Q9Y3L3 701 aa13.46□□□□□ -0.25
PDE6B-201ENST00000255622 RGPD5Q99666 1765 aa13.46□□□□□ -0.26
PDE6B-201ENST00000255622 GRM8O00222 908 aa13.45□□□□□ -0.26
PDE6B-201ENST00000255622 PDIA6Q15084 440 aa13.45□□□□□ -0.26
PDE6B-201ENST00000255622 EAF2Q96CJ1 260 aaPredicted RBP13.45□□□□□ -0.26
PDE6B-201ENST00000255622 PDLIM2Q96JY6 352 aa13.45□□□□□ -0.26
PDE6B-201ENST00000255622 HEG1Q9ULI3 1381 aa13.45□□□□□ -0.26
PDE6B-201ENST00000255622 ALDH1L1O75891 902 aa13.45□□□□□ -0.26
PDE6B-201ENST00000255622 SYT1P21579 422 aa13.45□□□□□ -0.26
PDE6B-201ENST00000255622 CCDC83Q8IWF9 413 aa13.45□□□□□ -0.26
PDE6B-201ENST00000255622 HYPKQ9NX55 129 aa13.45□□□□□ -0.26
PDE6B-201ENST00000255622 LIMCH1Q9UPQ0 1083 aa13.45□□□□□ -0.26
PDE6B-201ENST00000255622 SLC20A2Q08357 652 aa13.45□□□□□ -0.26
PDE6B-201ENST00000255622 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.45□□□□□ -0.26
PDE6B-201ENST00000255622 EPB41L2O43491 1005 aaKnown RBP13.44□□□□□ -0.26
PDE6B-201ENST00000255622 IGKV5-2P06315 115 aa13.44□□□□□ -0.26
PDE6B-201ENST00000255622 DDX17Q92841 729 aaKnown RBP13.44□□□□□ -0.26
PDE6B-201ENST00000255622 CCDC66A2RUB6 948 aa13.44□□□□□ -0.26
PDE6B-201ENST00000255622 ERICH4A6NGS2 130 aa13.44□□□□□ -0.26
PDE6B-201ENST00000255622 KCNA4P22459 653 aa13.44□□□□□ -0.26
PDE6B-201ENST00000255622 NCAPD2Q15021 1401 aa13.44□□□□□ -0.26
PDE6B-201ENST00000255622 SLIT3O75094 1523 aa13.44□□□□□ -0.26
PDE6B-201ENST00000255622 LINS1Q8NG48 757 aa13.44□□□□□ -0.26
PDE6B-201ENST00000255622 STX6O43752 255 aa13.43□□□□□ -0.26
PDE6B-201ENST00000255622 ZSCAN22P10073 491 aaPredicted RBP13.43□□□□□ -0.26
PDE6B-201ENST00000255622 CAPN2P17655 700 aa13.43□□□□□ -0.26
PDE6B-201ENST00000255622 KRT28Q7Z3Y7 464 aa13.43□□□□□ -0.26
PDE6B-201ENST00000255622 TOMM22Q9NS69 142 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms