RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 DNAI2Q9GZS0 605 aa10.9□□□□□ -0.67
PDE6A-201ENST00000255266 GJA3Q9Y6H8 435 aa10.9□□□□□ -0.67
PDE6A-201ENST00000255266 LARGE2Q8N3Y3 721 aa10.89□□□□□ -0.67
PDE6A-201ENST00000255266 NUP133Q8WUM0 1156 aa10.89□□□□□ -0.67
PDE6A-201ENST00000255266 F6X3S4 739 aa10.89□□□□□ -0.67
PDE6A-201ENST00000255266 PDIA4P13667 645 aaKnown RBP10.89□□□□□ -0.67
PDE6A-201ENST00000255266 PRKCSHP14314 528 aaPredicted RBP10.89□□□□□ -0.67
PDE6A-201ENST00000255266 CCDC96Q2M329 555 aa10.89□□□□□ -0.67
PDE6A-201ENST00000255266 SLKQ9H2G2 1235 aaPredicted RBP10.89□□□□□ -0.67
PDE6A-201ENST00000255266 NSFL1CQ9UNZ2 370 aaKnown RBP10.89□□□□□ -0.67
PDE6A-201ENST00000255266 DDX11L8A8MPP1 907 aa10.89□□□□□ -0.67
PDE6A-201ENST00000255266 HMGB1P09429 215 aaKnown RBP10.89□□□□□ -0.67
PDE6A-201ENST00000255266 HSPA1LP34931 641 aa10.89□□□□□ -0.67
PDE6A-201ENST00000255266 CREBRFQ8IUR6 639 aa10.89□□□□□ -0.67
PDE6A-201ENST00000255266 ZNF396Q96N95 335 aaPredicted RBP10.89□□□□□ -0.67
PDE6A-201ENST00000255266 CARD14Q9BXL6 1004 aa10.89□□□□□ -0.67
PDE6A-201ENST00000255266 DNTTIP2Q5QJE6 756 aaKnown RBP10.89□□□□□ -0.67
PDE6A-201ENST00000255266 IL1RAPL2Q9NP60 686 aa10.88□□□□□ -0.67
PDE6A-201ENST00000255266 DENND2AQ9ULE3 1009 aa10.88□□□□□ -0.67
PDE6A-201ENST00000255266 EVI5LQ96CN4 794 aa10.88□□□□□ -0.67
PDE6A-201ENST00000255266 GJD4Q96KN9 370 aaPredicted RBP10.88□□□□□ -0.67
PDE6A-201ENST00000255266 FRMPD1Q5SYB0 1578 aa10.88□□□□□ -0.67
PDE6A-201ENST00000255266 SLC27A3Q5K4L6 730 aa10.88□□□□□ -0.67
PDE6A-201ENST00000255266 MINDY4BA8MYZ0 360 aa10.88□□□□□ -0.67
PDE6A-201ENST00000255266 TPM3P06753 285 aa10.88□□□□□ -0.67
PDE6A-201ENST00000255266 C2CD5Q86YS7 1000 aa10.88□□□□□ -0.67
PDE6A-201ENST00000255266 ZSCAN31Q96LW9 406 aaPredicted RBP10.88□□□□□ -0.67
PDE6A-201ENST00000255266 SH2D4AQ9H788 454 aa10.88□□□□□ -0.67
PDE6A-201ENST00000255266 FBXO41Q8TF61 875 aa10.88□□□□□ -0.67
PDE6A-201ENST00000255266 UFL1O94874 794 aa10.87□□□□□ -0.67
PDE6A-201ENST00000255266 NUCB2P80303 420 aa10.87□□□□□ -0.67
PDE6A-201ENST00000255266 RABEP1Q15276 862 aa10.87□□□□□ -0.67
PDE6A-201ENST00000255266 WDR78Q5VTH9 848 aa10.87□□□□□ -0.67
PDE6A-201ENST00000255266 PPP4R3AQ6IN85 833 aa10.87□□□□□ -0.67
PDE6A-201ENST00000255266 JMYQ8N9B5 988 aa10.87□□□□□ -0.67
PDE6A-201ENST00000255266 MADDQ8WXG6 1647 aa10.87□□□□□ -0.67
PDE6A-201ENST00000255266 NUTM1Q86Y26 1132 aa10.87□□□□□ -0.67
PDE6A-201ENST00000255266 CTCFLQ8NI51 663 aaPredicted RBP10.87□□□□□ -0.67
PDE6A-201ENST00000255266 BCS1LQ9Y276 419 aa10.87□□□□□ -0.67
PDE6A-201ENST00000255266 KRT18P05783 430 aaKnown RBP10.87□□□□□ -0.67
PDE6A-201ENST00000255266 CCDC73Q6ZRK6 1079 aa10.87□□□□□ -0.67
PDE6A-201ENST00000255266 CCDC12Q8WUD4 166 aaPredicted RBP10.87□□□□□ -0.67
PDE6A-201ENST00000255266 H7C1D1 291 aa10.87□□□□□ -0.67
PDE6A-201ENST00000255266 GNAT2P19087 354 aa10.87□□□□□ -0.67
PDE6A-201ENST00000255266 TCIRG1Q13488 830 aa10.87□□□□□ -0.67
PDE6A-201ENST00000255266 METTL22Q9BUU2 404 aaPredicted RBP10.87□□□□□ -0.67
PDE6A-201ENST00000255266 PES1O00541 588 aaKnown RBP10.86□□□□□ -0.67
PDE6A-201ENST00000255266 TRIM21P19474 475 aaKnown RBP10.86□□□□□ -0.67
PDE6A-201ENST00000255266 VPS72Q15906 364 aa10.86□□□□□ -0.67
PDE6A-201ENST00000255266 BLOC1S2Q6QNY1 142 aa10.86□□□□□ -0.67
PDE6A-201ENST00000255266 VEZTQ9HBM0 779 aa10.86□□□□□ -0.67
PDE6A-201ENST00000255266 VPS37CA5D8V6 355 aaPredicted RBP10.86□□□□□ -0.67
PDE6A-201ENST00000255266 DCCP43146 1447 aa10.86□□□□□ -0.67
PDE6A-201ENST00000255266 LOC102724428A0A0B4J2F2 783 aa10.86□□□□□ -0.67
PDE6A-201ENST00000255266 KIF5BP33176 963 aa10.86□□□□□ -0.67
PDE6A-201ENST00000255266 SIK1P57059 783 aa10.86□□□□□ -0.67
PDE6A-201ENST00000255266 SKOR2Q2VWA4 1001 aaPredicted RBP10.86□□□□□ -0.67
PDE6A-201ENST00000255266 NAA16Q6N069 864 aaPredicted RBP10.86□□□□□ -0.67
PDE6A-201ENST00000255266 ARHGAP27Q6ZUM4 889 aa10.86□□□□□ -0.67
PDE6A-201ENST00000255266 C22orf23Q9BZE7 217 aa10.86□□□□□ -0.67
PDE6A-201ENST00000255266 ECHDC1Q9NTX5 307 aa10.86□□□□□ -0.67
PDE6A-201ENST00000255266 FOXD4L1Q9NU39 408 aa10.86□□□□□ -0.67
PDE6A-201ENST00000255266 DLC1Q96QB1 1528 aa10.86□□□□□ -0.67
PDE6A-201ENST00000255266 GRIPAP1Q4V328 841 aa10.86□□□□□ -0.67
PDE6A-201ENST00000255266 LMBR1LQ6UX01 489 aa10.86□□□□□ -0.67
PDE6A-201ENST00000255266 IL27Q8NEV9 243 aa10.86□□□□□ -0.67
PDE6A-201ENST00000255266 C1orf167Q5SNV9 1468 aa10.86□□□□□ -0.67
PDE6A-201ENST00000255266 PPRC1Q5VV67 1664 aaKnown RBP10.86□□□□□ -0.67
PDE6A-201ENST00000255266 ZNF213O14771 459 aa10.86□□□□□ -0.67
PDE6A-201ENST00000255266 DNAJC10Q8IXB1 793 aa10.86□□□□□ -0.67
PDE6A-201ENST00000255266 EXOC6BQ9Y2D4 811 aa10.86□□□□□ -0.67
PDE6A-201ENST00000255266 KIDINS220Q9ULH0 1771 aa10.85□□□□□ -0.67
PDE6A-201ENST00000255266 RIMBP2O15034 1052 aa10.85□□□□□ -0.67
PDE6A-201ENST00000255266 LDHBP07195 334 aaKnown RBP10.85□□□□□ -0.67
PDE6A-201ENST00000255266 STK11IPQ8N1F8 1099 aa10.85□□□□□ -0.67
PDE6A-201ENST00000255266 MPNDQ8N594 471 aa10.85□□□□□ -0.67
PDE6A-201ENST00000255266 PIK3C2BO00750 1634 aa10.85□□□□□ -0.67
PDE6A-201ENST00000255266 PDE4AP27815 886 aa10.85□□□□□ -0.67
PDE6A-201ENST00000255266 MAP4K4O95819 1239 aaPredicted RBP10.85□□□□□ -0.67
PDE6A-201ENST00000255266 BOLA2Q9H3K6 86 aa10.85□□□□□ -0.67
PDE6A-201ENST00000255266 SETBP1Q9Y6X0 1596 aa10.85□□□□□ -0.67
PDE6A-201ENST00000255266 ARHGEF6Q15052 776 aa10.85□□□□□ -0.67
PDE6A-201ENST00000255266 BICD2Q8TD16 824 aa10.85□□□□□ -0.67
PDE6A-201ENST00000255266 CC2D2BQ6DHV5 1058 aa10.84□□□□□ -0.67
PDE6A-201ENST00000255266 CATIPQ7Z7H3 387 aa10.84□□□□□ -0.67
PDE6A-201ENST00000255266 CCDC125Q86Z20 511 aa10.84□□□□□ -0.67
PDE6A-201ENST00000255266 CRB1P82279 1406 aa10.84□□□□□ -0.67
PDE6A-201ENST00000255266 CCDC8Q9H0W5 538 aaPredicted RBP10.84□□□□□ -0.67
PDE6A-201ENST00000255266 TRPM1Q7Z4N2 1603 aa10.84□□□□□ -0.67
PDE6A-201ENST00000255266 GOLGA6L19H0YKK7 550 aa10.84□□□□□ -0.67
PDE6A-201ENST00000255266 CWC27Q6UX04 472 aaKnown RBP10.84□□□□□ -0.67
PDE6A-201ENST00000255266 MRPL50Q8N5N7 158 aaKnown RBP10.84□□□□□ -0.67
PDE6A-201ENST00000255266 TBC1D22AQ8WUA7 517 aa10.84□□□□□ -0.67
PDE6A-201ENST00000255266 RANBP6O60518 1105 aaKnown RBP10.84□□□□□ -0.67
PDE6A-201ENST00000255266 CYP7A1P22680 504 aa10.84□□□□□ -0.67
PDE6A-201ENST00000255266 PICK1Q9NRD5 415 aa10.84□□□□□ -0.67
PDE6A-201ENST00000255266 RBM26Q5T8P6 1007 aaKnown RBP10.83□□□□□ -0.67
PDE6A-201ENST00000255266 EPS15P42566 896 aa10.83□□□□□ -0.68
PDE6A-201ENST00000255266 PIP4K2AP48426 406 aaPredicted RBP10.83□□□□□ -0.68
PDE6A-201ENST00000255266 GRM1Q13255 1194 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms