RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 KIF18AQ8NI77 898 aa20.57■□□□□ 0.88
NDFIP1-201ENST00000253814 ANO10Q9NW15 660 aa20.57■□□□□ 0.88
NDFIP1-201ENST00000253814 SFPQP23246 707 aaKnown RBP eCLIP20.57■□□□□ 0.88
NDFIP1-201ENST00000253814 ERCC4Q92889 916 aaPredicted RBP20.57■□□□□ 0.88
NDFIP1-201ENST00000253814 BCL2L12Q9HB09 334 aa20.57■□□□□ 0.88
NDFIP1-201ENST00000253814 KCNQ3O43525 872 aa20.56■□□□□ 0.88
NDFIP1-201ENST00000253814 QRICH2Q9H0J4 1663 aa20.56■□□□□ 0.88
NDFIP1-201ENST00000253814 GRM8O00222 908 aa20.56■□□□□ 0.88
NDFIP1-201ENST00000253814 PYCARDQ9ULZ3 195 aa20.56■□□□□ 0.88
NDFIP1-201ENST00000253814 NPHP3Q7Z494 1330 aa20.56■□□□□ 0.88
NDFIP1-201ENST00000253814 A0A087WZG4 1122 aa20.56■□□□□ 0.88
NDFIP1-201ENST00000253814 LARGE1O95461 756 aa20.56■□□□□ 0.88
NDFIP1-201ENST00000253814 CFAP100Q494V2 611 aa20.56■□□□□ 0.88
NDFIP1-201ENST00000253814 RRP12Q5JTH9 1297 aaKnown RBP20.56■□□□□ 0.88
NDFIP1-201ENST00000253814 ZBTB9Q96C00 473 aa20.56■□□□□ 0.88
NDFIP1-201ENST00000253814 CYP2E1P05181 493 aaPredicted RBP20.55■□□□□ 0.88
NDFIP1-201ENST00000253814 CCDC129Q6ZRS4 1044 aa20.55■□□□□ 0.88
NDFIP1-201ENST00000253814 LRRC7Q96NW7 1537 aa20.55■□□□□ 0.88
NDFIP1-201ENST00000253814 YEATS2Q9ULM3 1422 aa20.55■□□□□ 0.88
NDFIP1-201ENST00000253814 TMC6Q7Z403 805 aa20.55■□□□□ 0.88
NDFIP1-201ENST00000253814 CCDC34Q96HJ3 373 aa20.55■□□□□ 0.88
NDFIP1-201ENST00000253814 PDLIM2Q96JY6 352 aa20.55■□□□□ 0.88
NDFIP1-201ENST00000253814 PHF8Q9UPP1 1060 aa20.55■□□□□ 0.88
NDFIP1-201ENST00000253814 MTMR6Q9Y217 621 aa20.55■□□□□ 0.88
NDFIP1-201ENST00000253814 HSP90AA4PQ58FG1 418 aa20.55■□□□□ 0.88
NDFIP1-201ENST00000253814 CHD1O14646 1710 aa20.55■□□□□ 0.88
NDFIP1-201ENST00000253814 TULP4Q9NRJ4 1543 aa20.55■□□□□ 0.88
NDFIP1-201ENST00000253814 JAK2O60674 1132 aa20.54■□□□□ 0.88
NDFIP1-201ENST00000253814 CBX8Q9HC52 389 aa20.54■□□□□ 0.88
NDFIP1-201ENST00000253814 TTC6Q86TZ1 520 aa20.54■□□□□ 0.88
NDFIP1-201ENST00000253814 SSH3Q8TE77 659 aa20.54■□□□□ 0.88
NDFIP1-201ENST00000253814 CEP152O94986 1710 aa20.54■□□□□ 0.88
NDFIP1-201ENST00000253814 TTC41PQ6P2S7 1318 aa20.54■□□□□ 0.88
NDFIP1-201ENST00000253814 HOXC9P31274 260 aa20.54■□□□□ 0.88
NDFIP1-201ENST00000253814 TEX35Q5T0J7 233 aa20.54■□□□□ 0.88
NDFIP1-201ENST00000253814 CLEC17AQ6ZS10 378 aa20.54■□□□□ 0.88
NDFIP1-201ENST00000253814 THEMISQ8N1K5 641 aaPredicted RBP20.54■□□□□ 0.88
NDFIP1-201ENST00000253814 UHRF1BP1LA0JNW5 1464 aa20.54■□□□□ 0.88
NDFIP1-201ENST00000253814 BICC1Q9H694 974 aaKnown RBP20.53■□□□□ 0.88
NDFIP1-201ENST00000253814 AOPEPQ8N6M6 819 aa20.53■□□□□ 0.88
NDFIP1-201ENST00000253814 SYTL4Q96C24 671 aaPredicted RBP20.53■□□□□ 0.88
NDFIP1-201ENST00000253814 MAP3K5Q99683 1374 aa20.53■□□□□ 0.88
NDFIP1-201ENST00000253814 AKAP17AQ02040 695 aaKnown RBP20.53■□□□□ 0.88
NDFIP1-201ENST00000253814 STX1AQ16623 288 aa20.53■□□□□ 0.88
NDFIP1-201ENST00000253814 KSR2Q6VAB6 950 aa20.53■□□□□ 0.88
NDFIP1-201ENST00000253814 HYPKQ9NX55 129 aa20.53■□□□□ 0.88
NDFIP1-201ENST00000253814 METP08581 1390 aa20.53■□□□□ 0.88
NDFIP1-201ENST00000253814 SLC27A2O14975 620 aa20.53■□□□□ 0.88
NDFIP1-201ENST00000253814 PDIA4P13667 645 aaKnown RBP20.53■□□□□ 0.88
NDFIP1-201ENST00000253814 TTC39AQ5SRH9 613 aa20.53■□□□□ 0.88
NDFIP1-201ENST00000253814 COPS6Q7L5N1 327 aa20.53■□□□□ 0.88
NDFIP1-201ENST00000253814 GLI2P10070 1586 aa20.52■□□□□ 0.88
NDFIP1-201ENST00000253814 RGS12O14924 1447 aa20.52■□□□□ 0.88
NDFIP1-201ENST00000253814 DHX16O60231 1041 aaKnown RBP20.52■□□□□ 0.88
NDFIP1-201ENST00000253814 URI1O94763 535 aaPredicted RBP20.52■□□□□ 0.88
NDFIP1-201ENST00000253814 CCDC82Q8N4S0 544 aa20.52■□□□□ 0.88
NDFIP1-201ENST00000253814 C8orf76Q96K31 380 aa20.52■□□□□ 0.88
NDFIP1-201ENST00000253814 TATP17735 454 aaPredicted RBP20.52■□□□□ 0.88
NDFIP1-201ENST00000253814 UBXN4Q92575 508 aa20.52■□□□□ 0.88
NDFIP1-201ENST00000253814 TPCN1Q9ULQ1 816 aa20.52■□□□□ 0.88
NDFIP1-201ENST00000253814 USP16Q9Y5T5 823 aa20.52■□□□□ 0.88
NDFIP1-201ENST00000253814 U3KPZ7 1027 aaPredicted RBP20.52■□□□□ 0.88
NDFIP1-201ENST00000253814 NCOA3Q9Y6Q9 1424 aa20.52■□□□□ 0.87
NDFIP1-201ENST00000253814 XAGE3Q8WTP9 111 aa20.52■□□□□ 0.87
NDFIP1-201ENST00000253814 IFIT1P09914 478 aaKnown RBP20.51■□□□□ 0.87
NDFIP1-201ENST00000253814 APOBRQ0VD83 1088 aa20.51■□□□□ 0.87
NDFIP1-201ENST00000253814 NRBP1Q9UHY1 535 aa20.51■□□□□ 0.87
NDFIP1-201ENST00000253814 PRR36Q9H6K5 1346 aa20.51■□□□□ 0.87
NDFIP1-201ENST00000253814 PNPLA6Q8IY17 1366 aa20.51■□□□□ 0.87
NDFIP1-201ENST00000253814 SAFBQ15424 915 aaKnown RBP eCLIP20.51■□□□□ 0.87
NDFIP1-201ENST00000253814 CABP4P57796 275 aa20.5■□□□□ 0.87
NDFIP1-201ENST00000253814 CCDC158Q5M9N0 1113 aa20.5■□□□□ 0.87
NDFIP1-201ENST00000253814 LSG1Q9H089 658 aaKnown RBP20.5■□□□□ 0.87
NDFIP1-201ENST00000253814 CEP126Q9P2H0 1117 aa20.5■□□□□ 0.87
NDFIP1-201ENST00000253814 TTC21AQ8NDW8 1320 aa20.5■□□□□ 0.87
NDFIP1-201ENST00000253814 A0A087WWV3 80 aa20.5■□□□□ 0.87
NDFIP1-201ENST00000253814 POLR3GO15318 223 aaPredicted RBP20.5■□□□□ 0.87
NDFIP1-201ENST00000253814 LEO1Q8WVC0 666 aaPredicted RBP20.5■□□□□ 0.87
NDFIP1-201ENST00000253814 SKIDA1Q1XH10 827 aa20.49■□□□□ 0.87
NDFIP1-201ENST00000253814 STAP2Q9UGK3 403 aa20.49■□□□□ 0.87
NDFIP1-201ENST00000253814 CCDC66A2RUB6 948 aa20.49■□□□□ 0.87
NDFIP1-201ENST00000253814 CCDC69A6NI79 296 aa20.49■□□□□ 0.87
NDFIP1-201ENST00000253814 CCDC144CPQ8IYA2 1237 aa20.49■□□□□ 0.87
NDFIP1-201ENST00000253814 SMAP1Q8IYB5 467 aaPredicted RBP20.49■□□□□ 0.87
NDFIP1-201ENST00000253814 NCOA5Q9HCD5 579 aaKnown RBP20.49■□□□□ 0.87
NDFIP1-201ENST00000253814 SNW1Q13573 536 aaKnown RBP20.48■□□□□ 0.87
NDFIP1-201ENST00000253814 LINS1Q8NG48 757 aa20.48■□□□□ 0.87
NDFIP1-201ENST00000253814 HMG20BQ9P0W2 317 aa20.48■□□□□ 0.87
NDFIP1-201ENST00000253814 NR1I2O75469 434 aa20.48■□□□□ 0.87
NDFIP1-201ENST00000253814 SLC3A2P08195 630 aaKnown RBP20.48■□□□□ 0.87
NDFIP1-201ENST00000253814 A0A0D9SFI3 127 aa20.47■□□□□ 0.87
NDFIP1-201ENST00000253814 GOLGA8BA8MQT2 603 aa20.47■□□□□ 0.87
NDFIP1-201ENST00000253814 LMOD1P29536 600 aaPredicted RBP20.47■□□□□ 0.87
NDFIP1-201ENST00000253814 PODXL2Q9NZ53 605 aa20.47■□□□□ 0.87
NDFIP1-201ENST00000253814 HOOK1Q9UJC3 728 aaKnown RBP20.47■□□□□ 0.87
NDFIP1-201ENST00000253814 PAXBP1Q9Y5B6 917 aa20.47■□□□□ 0.87
NDFIP1-201ENST00000253814 CTAGE5O15320 804 aa20.47■□□□□ 0.87
NDFIP1-201ENST00000253814 GOLGA6L1Q8N7Z2 621 aa20.47■□□□□ 0.87
NDFIP1-201ENST00000253814 RPS6KB1P23443 525 aa20.47■□□□□ 0.87
NDFIP1-201ENST00000253814 CCDC57Q2TAC2 916 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms