RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 LAMB1P07942 1786 aa5□□□□□ -1.61
UBE4A-201ENST00000252108 PALLDQ8WX93 1383 aa5□□□□□ -1.61
UBE4A-201ENST00000252108 CACNA1SQ13698 1873 aa5□□□□□ -1.61
UBE4A-201ENST00000252108 ATRNO75882 1429 aa5□□□□□ -1.61
UBE4A-201ENST00000252108 ELL2O00472 640 aaPredicted RBP4.99□□□□□ -1.61
UBE4A-201ENST00000252108 GPATCH3Q96I76 525 aa4.99□□□□□ -1.61
UBE4A-201ENST00000252108 PRIMPOLQ96LW4 560 aa4.99□□□□□ -1.61
UBE4A-201ENST00000252108 SPATA31A3Q5VYP0 1347 aa4.99□□□□□ -1.61
UBE4A-201ENST00000252108 ERC2O15083 957 aa4.99□□□□□ -1.61
UBE4A-201ENST00000252108 RUFY2Q8WXA3 655 aa4.99□□□□□ -1.61
UBE4A-201ENST00000252108 RTF1Q92541 710 aaKnown RBP4.99□□□□□ -1.61
UBE4A-201ENST00000252108 GOLGA6L4A6NEF3 574 aa4.99□□□□□ -1.61
UBE4A-201ENST00000252108 BAG4O95429 457 aaKnown RBP4.99□□□□□ -1.61
UBE4A-201ENST00000252108 NECTIN1Q15223 517 aa4.99□□□□□ -1.61
UBE4A-201ENST00000252108 HSP90AB4PQ58FF6 505 aa4.99□□□□□ -1.61
UBE4A-201ENST00000252108 MCTP1Q6DN14 999 aa4.99□□□□□ -1.61
UBE4A-201ENST00000252108 NPHP3Q7Z494 1330 aa4.99□□□□□ -1.61
UBE4A-201ENST00000252108 TICAM2Q86XR7 235 aa4.99□□□□□ -1.61
UBE4A-201ENST00000252108 PANK2Q9BZ23 570 aa4.99□□□□□ -1.61
UBE4A-201ENST00000252108 WDR33Q9C0J8 1336 aaKnown RBP4.99□□□□□ -1.61
UBE4A-201ENST00000252108 FOCADQ5VW36 1801 aa4.99□□□□□ -1.61
UBE4A-201ENST00000252108 ZNF609O15014 1411 aa4.99□□□□□ -1.61
UBE4A-201ENST00000252108 NEDD4P46934 1319 aa4.99□□□□□ -1.61
UBE4A-201ENST00000252108 ALDH1L1O75891 902 aa4.99□□□□□ -1.61
UBE4A-201ENST00000252108 NSFL1CQ9UNZ2 370 aaKnown RBP4.99□□□□□ -1.61
UBE4A-201ENST00000252108 KIF3AQ9Y496 699 aa4.99□□□□□ -1.61
UBE4A-201ENST00000252108 LRRC37AA6NMS7 1700 aa4.99□□□□□ -1.61
UBE4A-201ENST00000252108 RIC1Q4ADV7 1423 aa4.99□□□□□ -1.61
UBE4A-201ENST00000252108 TTC41PQ6P2S7 1318 aa4.99□□□□□ -1.61
UBE4A-201ENST00000252108 CYP27B1O15528 508 aa4.99□□□□□ -1.61
UBE4A-201ENST00000252108 GNAI2P04899 355 aa4.99□□□□□ -1.61
UBE4A-201ENST00000252108 CCDC30Q5VVM6 783 aa4.99□□□□□ -1.61
UBE4A-201ENST00000252108 AGXT2Q9BYV1 514 aa4.99□□□□□ -1.61
UBE4A-201ENST00000252108 TSPYL4Q9UJ04 414 aa4.99□□□□□ -1.61
UBE4A-201ENST00000252108 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.99□□□□□ -1.61
UBE4A-201ENST00000252108 SSFA2P28290 1259 aa4.98□□□□□ -1.61
UBE4A-201ENST00000252108 CAVIN1Q6NZI2 390 aaKnown RBP4.98□□□□□ -1.61
UBE4A-201ENST00000252108 PAXIP1Q6ZW49 1069 aaPredicted RBP4.98□□□□□ -1.61
UBE4A-201ENST00000252108 ANKLE2Q86XL3 938 aa4.98□□□□□ -1.61
UBE4A-201ENST00000252108 ZGPATQ8N5A5 531 aaKnown RBP4.98□□□□□ -1.61
UBE4A-201ENST00000252108 MX1P20591 662 aa4.98□□□□□ -1.61
UBE4A-201ENST00000252108 NLRP6P59044 892 aa4.98□□□□□ -1.61
UBE4A-201ENST00000252108 ZRSR1Q15695 479 aaKnown RBP4.98□□□□□ -1.61
UBE4A-201ENST00000252108 FBXL16Q8N461 479 aa4.98□□□□□ -1.61
UBE4A-201ENST00000252108 GNAI3P08754 354 aa4.98□□□□□ -1.61
UBE4A-201ENST00000252108 RASEFQ8IZ41 740 aa4.98□□□□□ -1.61
UBE4A-201ENST00000252108 LRRFIP2Q9Y608 721 aaKnown RBP4.98□□□□□ -1.61
UBE4A-201ENST00000252108 RAB11FIP3O75154 756 aa4.98□□□□□ -1.61
UBE4A-201ENST00000252108 PHKG2P15735 406 aa4.98□□□□□ -1.61
UBE4A-201ENST00000252108 LRRC59Q96AG4 307 aaKnown RBP4.98□□□□□ -1.61
UBE4A-201ENST00000252108 CHPF2Q9P2E5 772 aa4.98□□□□□ -1.61
UBE4A-201ENST00000252108 SALL1Q9NSC2 1324 aa4.98□□□□□ -1.61
UBE4A-201ENST00000252108 AMOTQ4VCS5 1084 aa4.98□□□□□ -1.61
UBE4A-201ENST00000252108 ZBTB22O15209 634 aa4.97□□□□□ -1.61
UBE4A-201ENST00000252108 EPHA10Q5JZY3 1008 aa4.97□□□□□ -1.61
UBE4A-201ENST00000252108 TM6SF1Q9BZW5 370 aa4.97□□□□□ -1.61
UBE4A-201ENST00000252108 R3HCC1Q9Y3T6 440 aaKnown RBP4.97□□□□□ -1.61
UBE4A-201ENST00000252108 RBM43Q6ZSC3 357 aaKnown RBP4.97□□□□□ -1.61
UBE4A-201ENST00000252108 RHPN1Q8TCX5 695 aa4.97□□□□□ -1.61
UBE4A-201ENST00000252108 TPM4P67936 248 aa4.97□□□□□ -1.61
UBE4A-201ENST00000252108 SLC52A2Q9HAB3 445 aa4.97□□□□□ -1.61
UBE4A-201ENST00000252108 CARMIL3Q8ND23 1372 aa4.97□□□□□ -1.61
UBE4A-201ENST00000252108 PDCP20941 246 aa4.96□□□□□ -1.61
UBE4A-201ENST00000252108 LRSAM1Q6UWE0 723 aa4.96□□□□□ -1.61
UBE4A-201ENST00000252108 PPP1R42Q7Z4L9 355 aa4.96□□□□□ -1.61
UBE4A-201ENST00000252108 USHBP1Q8N6Y0 703 aa4.96□□□□□ -1.61
UBE4A-201ENST00000252108 LRRCC1Q9C099 1032 aa4.96□□□□□ -1.61
UBE4A-201ENST00000252108 DDX21Q9NR30 783 aaKnown RBP eCLIP4.96□□□□□ -1.61
UBE4A-201ENST00000252108 NOL7Q9UMY1 257 aaKnown RBP4.96□□□□□ -1.61
UBE4A-201ENST00000252108 ZKSCAN5Q9Y2L8 839 aa4.96□□□□□ -1.61
UBE4A-201ENST00000252108 SNX14Q9Y5W7 946 aa4.96□□□□□ -1.61
UBE4A-201ENST00000252108 KSR2Q6VAB6 950 aa4.96□□□□□ -1.62
UBE4A-201ENST00000252108 RUFY3Q7L099 469 aa4.96□□□□□ -1.62
UBE4A-201ENST00000252108 ABTB2Q8N961 1025 aa4.96□□□□□ -1.62
UBE4A-201ENST00000252108 ZNF500O60304 480 aaPredicted RBP4.96□□□□□ -1.62
UBE4A-201ENST00000252108 CAVIN2O95810 425 aa4.96□□□□□ -1.62
UBE4A-201ENST00000252108 MAP4K1Q92918 833 aa4.96□□□□□ -1.62
UBE4A-201ENST00000252108 TMX3Q96JJ7 454 aa4.96□□□□□ -1.62
UBE4A-201ENST00000252108 ZSCAN31Q96LW9 406 aaPredicted RBP4.96□□□□□ -1.62
UBE4A-201ENST00000252108 C19orf44Q9H6X5 657 aa4.96□□□□□ -1.62
UBE4A-201ENST00000252108 COPRSQ9NQ92 184 aa4.96□□□□□ -1.62
UBE4A-201ENST00000252108 EXOC6BQ9Y2D4 811 aa4.96□□□□□ -1.62
UBE4A-201ENST00000252108 TAF6LQ9Y6J9 622 aa4.96□□□□□ -1.62
UBE4A-201ENST00000252108 UQCRHLA0A096LP55 91 aa4.96□□□□□ -1.62
UBE4A-201ENST00000252108 NBPF26B4DH59 902 aa4.96□□□□□ -1.62
UBE4A-201ENST00000252108 HIP1O00291 1037 aa4.96□□□□□ -1.62
UBE4A-201ENST00000252108 UQCRHP07919 91 aa4.96□□□□□ -1.62
UBE4A-201ENST00000252108 EVCP57679 992 aa4.96□□□□□ -1.62
UBE4A-201ENST00000252108 FOXO4P98177 505 aa4.96□□□□□ -1.62
UBE4A-201ENST00000252108 NBPF14Q5TI25 921 aa4.96□□□□□ -1.62
UBE4A-201ENST00000252108 NBPF10Q6P3W6 841 aaKnown RBP4.96□□□□□ -1.62
UBE4A-201ENST00000252108 NBPF15Q8N660 670 aa4.96□□□□□ -1.62
UBE4A-201ENST00000252108 DNAAF4Q8WXU2 420 aa4.96□□□□□ -1.62
UBE4A-201ENST00000252108 ZSWIM6Q9HCJ5 1215 aa4.96□□□□□ -1.62
UBE4A-201ENST00000252108 HYPKQ9NX55 129 aa4.96□□□□□ -1.62
UBE4A-201ENST00000252108 FAM13BQ9NYF5 915 aa4.96□□□□□ -1.62
UBE4A-201ENST00000252108 RNF20Q5VTR2 975 aa4.96□□□□□ -1.62
UBE4A-201ENST00000252108 SMAP1Q8IYB5 467 aaPredicted RBP4.96□□□□□ -1.62
UBE4A-201ENST00000252108 NID2Q14112 1375 aa4.95□□□□□ -1.62
UBE4A-201ENST00000252108 LARGE1O95461 756 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms