RNA–Protein interactions for RNA: ENST00000250559.13

RAP1B-201, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 13,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-201ENST00000250559 TRIM22Q8IYM9 498 aa5.51□□□□□ -1.53
RAP1B-201ENST00000250559 KLHDC4Q8TBB5 520 aa5.51□□□□□ -1.53
RAP1B-201ENST00000250559 ST5P78524 1137 aa5.51□□□□□ -1.53
RAP1B-201ENST00000250559 ABCC2Q92887 1545 aa5.51□□□□□ -1.53
RAP1B-201ENST00000250559 GCP02774 474 aa5.51□□□□□ -1.53
RAP1B-201ENST00000250559 EIF6P56537 245 aaKnown RBP5.51□□□□□ -1.53
RAP1B-201ENST00000250559 CCDC129Q6ZRS4 1044 aa5.51□□□□□ -1.53
RAP1B-201ENST00000250559 TMX3Q96JJ7 454 aa5.51□□□□□ -1.53
RAP1B-201ENST00000250559 LRRC2Q9BYS8 371 aa5.51□□□□□ -1.53
RAP1B-201ENST00000250559 PANK2Q9BZ23 570 aa5.51□□□□□ -1.53
RAP1B-201ENST00000250559 SDSP20132 328 aa5.51□□□□□ -1.53
RAP1B-201ENST00000250559 FNBP4Q8N3X1 1017 aaPredicted RBP5.51□□□□□ -1.53
RAP1B-201ENST00000250559 FEZ1Q99689 392 aa5.51□□□□□ -1.53
RAP1B-201ENST00000250559 RTCBQ9Y3I0 505 aaKnown RBP5.51□□□□□ -1.53
RAP1B-201ENST00000250559 SAMD9Q5K651 1589 aa5.51□□□□□ -1.53
RAP1B-201ENST00000250559 ANKRD18BA2A2Z9 1011 aa5.51□□□□□ -1.53
RAP1B-201ENST00000250559 SAMD9LQ8IVG5 1584 aa5.51□□□□□ -1.53
RAP1B-201ENST00000250559 CAVIN4Q5BKX8 364 aa5.51□□□□□ -1.53
RAP1B-201ENST00000250559 UBAC1Q9BSL1 405 aa5.51□□□□□ -1.53
RAP1B-201ENST00000250559 HYPKQ9NX55 129 aa5.51□□□□□ -1.53
RAP1B-201ENST00000250559 MAGEC2Q9UBF1 373 aaPredicted RBP5.51□□□□□ -1.53
RAP1B-201ENST00000250559 PDE1AP54750 535 aa5.51□□□□□ -1.53
RAP1B-201ENST00000250559 TRAPPC3LQ5T215 181 aa5.51□□□□□ -1.53
RAP1B-201ENST00000250559 COPS6Q7L5N1 327 aa5.51□□□□□ -1.53
RAP1B-201ENST00000250559 ZMYM3Q14202 1370 aa5.51□□□□□ -1.53
RAP1B-201ENST00000250559 COL17A1Q9UMD9 1497 aaPredicted RBP5.51□□□□□ -1.53
RAP1B-201ENST00000250559 BIN1O00499 593 aa5.5□□□□□ -1.53
RAP1B-201ENST00000250559 GIGYF1O75420 1035 aaPredicted RBP5.5□□□□□ -1.53
RAP1B-201ENST00000250559 TFCP2Q12800 502 aa5.5□□□□□ -1.53
RAP1B-201ENST00000250559 NAPBQ9H115 298 aa5.5□□□□□ -1.53
RAP1B-201ENST00000250559 CNPY2Q9Y2B0 182 aa5.5□□□□□ -1.53
RAP1B-201ENST00000250559 RANBP6O60518 1105 aaKnown RBP5.5□□□□□ -1.53
RAP1B-201ENST00000250559 SETDB2Q96T68 719 aa5.5□□□□□ -1.53
RAP1B-201ENST00000250559 NMIQ13287 307 aaPredicted RBP5.5□□□□□ -1.53
RAP1B-201ENST00000250559 NUP160Q12769 1436 aa5.5□□□□□ -1.53
RAP1B-201ENST00000250559 SP4Q02446 784 aa5.5□□□□□ -1.53
RAP1B-201ENST00000250559 EVI5LQ96CN4 794 aa5.5□□□□□ -1.53
RAP1B-201ENST00000250559 LGR6Q9HBX8 967 aa5.5□□□□□ -1.53
RAP1B-201ENST00000250559 UQCRHLA0A096LP55 91 aa5.5□□□□□ -1.53
RAP1B-201ENST00000250559 MBD3O95983 291 aa5.5□□□□□ -1.53
RAP1B-201ENST00000250559 UQCRHP07919 91 aa5.5□□□□□ -1.53
RAP1B-201ENST00000250559 CT47A1Q5JQC4 288 aaPredicted RBP5.5□□□□□ -1.53
RAP1B-201ENST00000250559 CLIP2Q9UDT6 1046 aa5.5□□□□□ -1.53
RAP1B-201ENST00000250559 GPS2Q13227 327 aa5.5□□□□□ -1.53
RAP1B-201ENST00000250559 XAGE3Q8WTP9 111 aa5.5□□□□□ -1.53
RAP1B-201ENST00000250559 SORBS3O60504 671 aa5.5□□□□□ -1.53
RAP1B-201ENST00000250559 DOK7Q18PE1 504 aa5.5□□□□□ -1.53
RAP1B-201ENST00000250559 USP25Q9UHP3 1055 aa5.5□□□□□ -1.53
RAP1B-201ENST00000250559 SLC12A7Q9Y666 1083 aa5.5□□□□□ -1.53
RAP1B-201ENST00000250559 GCC2Q8IWJ2 1684 aa5.5□□□□□ -1.53
RAP1B-201ENST00000250559 IL16Q14005 1332 aa5.5□□□□□ -1.53
RAP1B-201ENST00000250559 SSBP05455 408 aaKnown RBP eCLIP5.5□□□□□ -1.53
RAP1B-201ENST00000250559 MKNK2Q9HBH9 465 aa5.5□□□□□ -1.53
RAP1B-201ENST00000250559 ZNF76P36508 570 aa5.5□□□□□ -1.53
RAP1B-201ENST00000250559 TXLNAP40222 546 aa5.5□□□□□ -1.53
RAP1B-201ENST00000250559 SPOUT1Q5T280 376 aaKnown RBP5.5□□□□□ -1.53
RAP1B-201ENST00000250559 LMBR1LQ6UX01 489 aa5.5□□□□□ -1.53
RAP1B-201ENST00000250559 ZMYM4Q5VZL5 1548 aa5.49□□□□□ -1.53
RAP1B-201ENST00000250559 SSRP1Q08945 709 aaKnown RBP5.49□□□□□ -1.53
RAP1B-201ENST00000250559 EZH2Q15910 746 aaKnown RBP5.49□□□□□ -1.53
RAP1B-201ENST00000250559 MAP3K11Q16584 847 aa5.49□□□□□ -1.53
RAP1B-201ENST00000250559 MICU3Q86XE3 530 aa5.49□□□□□ -1.53
RAP1B-201ENST00000250559 ZGPATQ8N5A5 531 aaKnown RBP5.49□□□□□ -1.53
RAP1B-201ENST00000250559 ANKRD44Q8N8A2 993 aa5.49□□□□□ -1.53
RAP1B-201ENST00000250559 CPLX3Q8WVH0 158 aa5.49□□□□□ -1.53
RAP1B-201ENST00000250559 ZKSCAN3Q9BRR0 538 aa5.49□□□□□ -1.53
RAP1B-201ENST00000250559 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.49□□□□□ -1.538e-7■■□□□ 12.8
RAP1B-201ENST00000250559 UHRF1BP1Q6BDS2 1440 aa5.49□□□□□ -1.53
RAP1B-201ENST00000250559 GOLGA8AA7E2F4 631 aa5.49□□□□□ -1.53
RAP1B-201ENST00000250559 GOLGA8BA8MQT2 603 aa5.49□□□□□ -1.53
RAP1B-201ENST00000250559 STX6O43752 255 aa5.49□□□□□ -1.53
RAP1B-201ENST00000250559 ZNF652Q9Y2D9 606 aa5.49□□□□□ -1.53
RAP1B-201ENST00000250559 FAM47CQ5HY64 1035 aa5.49□□□□□ -1.53
RAP1B-201ENST00000250559 SOGA3Q5TF21 947 aa5.49□□□□□ -1.53
RAP1B-201ENST00000250559 CWC25Q9NXE8 425 aaPredicted RBP5.49□□□□□ -1.53
RAP1B-201ENST00000250559 TARBP1Q13395 1621 aaKnown RBP5.49□□□□□ -1.53
RAP1B-201ENST00000250559 MIGA1Q8NAN2 632 aa5.49□□□□□ -1.53
RAP1B-201ENST00000250559 TRIM35Q9UPQ4 493 aa5.49□□□□□ -1.53
RAP1B-201ENST00000250559 NDUFB9Q9Y6M9 179 aa5.49□□□□□ -1.53
RAP1B-201ENST00000250559 HELBQ8NG08 1087 aaPredicted RBP5.49□□□□□ -1.53
RAP1B-201ENST00000250559 OTUD7AQ8TE49 926 aaPredicted RBP5.49□□□□□ -1.53
RAP1B-201ENST00000250559 KLHL10Q6JEL2 608 aa5.49□□□□□ -1.53
RAP1B-201ENST00000250559 GIMAP6Q6P9H5 292 aa5.49□□□□□ -1.53
RAP1B-201ENST00000250559 ZSCAN31Q96LW9 406 aaPredicted RBP5.49□□□□□ -1.53
RAP1B-201ENST00000250559 TBC1D32Q96NH3 1257 aa5.49□□□□□ -1.53
RAP1B-201ENST00000250559 BMP2KLQ5H9B9 411 aa5.49□□□□□ -1.53
RAP1B-201ENST00000250559 AKAP4Q5JQC9 854 aa5.49□□□□□ -1.53
RAP1B-201ENST00000250559 PIK3R4Q99570 1358 aa5.49□□□□□ -1.53
RAP1B-201ENST00000250559 TRPM2O94759 1503 aa5.49□□□□□ -1.53
RAP1B-201ENST00000250559 HDAC1Q13547 482 aaPredicted RBP5.49□□□□□ -1.53
RAP1B-201ENST00000250559 HSP90AA4PQ58FG1 418 aa5.49□□□□□ -1.53
RAP1B-201ENST00000250559 IFIT3O14879 490 aaKnown RBP5.49□□□□□ -1.53
RAP1B-201ENST00000250559 RNMTO43148 476 aaKnown RBP5.49□□□□□ -1.53
RAP1B-201ENST00000250559 KRT32Q14532 448 aa5.49□□□□□ -1.53
RAP1B-201ENST00000250559 CFAP45Q9UL16 551 aa5.49□□□□□ -1.53
RAP1B-201ENST00000250559 FLT4P35916 1363 aa5.49□□□□□ -1.53
RAP1B-201ENST00000250559 SBNO2Q9Y2G9 1366 aa5.49□□□□□ -1.53
RAP1B-201ENST00000250559 C8orf76Q96K31 380 aa5.48□□□□□ -1.53
RAP1B-201ENST00000250559 ZNF830Q96NB3 372 aaPredicted RBP5.48□□□□□ -1.53
RAP1B-201ENST00000250559 RUFY1Q96T51 708 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms