RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 N4BP2Q86UW6 1770 aaPredicted RBP17.8■□□□□ 0.44
PMPCB-201ENST00000249269 HMOX1P09601 288 aa17.8■□□□□ 0.44
PMPCB-201ENST00000249269 PDE1AP54750 535 aa17.8■□□□□ 0.44
PMPCB-201ENST00000249269 MFSD4BQ5TF39 518 aa17.8■□□□□ 0.44
PMPCB-201ENST00000249269 R3HCC1Q9Y3T6 440 aaKnown RBP17.8■□□□□ 0.44
PMPCB-201ENST00000249269 WDR33Q9C0J8 1336 aaKnown RBP17.8■□□□□ 0.44
PMPCB-201ENST00000249269 RANBP17Q9H2T7 1088 aaKnown RBP17.79■□□□□ 0.44
PMPCB-201ENST00000249269 SUDS3Q9H7L9 328 aaPredicted RBP17.79■□□□□ 0.44
PMPCB-201ENST00000249269 STAP2Q9UGK3 403 aa17.79■□□□□ 0.44
PMPCB-201ENST00000249269 SALL3Q9BXA9 1300 aa17.79■□□□□ 0.44
PMPCB-201ENST00000249269 UQCRHLA0A096LP55 91 aa17.79■□□□□ 0.44
PMPCB-201ENST00000249269 WASLO00401 505 aaPredicted RBP17.79■□□□□ 0.44
PMPCB-201ENST00000249269 UQCRHP07919 91 aa17.79■□□□□ 0.44
PMPCB-201ENST00000249269 RGPD1P0DJD0 1748 aa17.79■□□□□ 0.44
PMPCB-201ENST00000249269 MSH6P52701 1360 aa17.78■□□□□ 0.44
PMPCB-201ENST00000249269 PES1O00541 588 aaKnown RBP17.78■□□□□ 0.44
PMPCB-201ENST00000249269 NRBP1Q9UHY1 535 aa17.78■□□□□ 0.44
PMPCB-201ENST00000249269 GYS2P54840 703 aa17.78■□□□□ 0.44
PMPCB-201ENST00000249269 TTC30BQ8N4P2 665 aa17.78■□□□□ 0.44
PMPCB-201ENST00000249269 ESYT1Q9BSJ8 1104 aa17.78■□□□□ 0.44
PMPCB-201ENST00000249269 CDCA7Q9BWT1 371 aaPredicted RBP17.78■□□□□ 0.44
PMPCB-201ENST00000249269 PXDNLA1KZ92 1463 aa17.78■□□□□ 0.44
PMPCB-201ENST00000249269 TTC21BQ7Z4L5 1316 aa17.78■□□□□ 0.44
PMPCB-201ENST00000249269 PARNO95453 639 aaKnown RBP17.77■□□□□ 0.44
PMPCB-201ENST00000249269 GTF2F1P35269 517 aaKnown RBP eCLIP17.77■□□□□ 0.44
PMPCB-201ENST00000249269 CD151P48509 253 aa17.77■□□□□ 0.44
PMPCB-201ENST00000249269 ZGPATQ8N5A5 531 aaKnown RBP17.77■□□□□ 0.44
PMPCB-201ENST00000249269 THUMPD2Q9BTF0 503 aaKnown RBP17.77■□□□□ 0.44
PMPCB-201ENST00000249269 GNAI3P08754 354 aa17.77■□□□□ 0.43
PMPCB-201ENST00000249269 NAP1L1P55209 391 aaKnown RBP17.77■□□□□ 0.43
PMPCB-201ENST00000249269 NUTM2DQ5VT03 806 aaPredicted RBP17.77■□□□□ 0.43
PMPCB-201ENST00000249269 TSPYL1Q9H0U9 437 aa17.77■□□□□ 0.43
PMPCB-201ENST00000249269 PPP1R1BQ9UD71 204 aaPredicted RBP17.77■□□□□ 0.43
PMPCB-201ENST00000249269 A2ML1A8K2U0 1454 aa17.76■□□□□ 0.43
PMPCB-201ENST00000249269 SYCE3A1L190 88 aa17.76■□□□□ 0.43
PMPCB-201ENST00000249269 NEK4P51957 841 aa17.76■□□□□ 0.43
PMPCB-201ENST00000249269 PHF8Q9UPP1 1060 aa17.76■□□□□ 0.43
PMPCB-201ENST00000249269 EMILIN1Q9Y6C2 1016 aa17.76■□□□□ 0.43
PMPCB-201ENST00000249269 CPS1P31327 1500 aa17.76■□□□□ 0.43
PMPCB-201ENST00000249269 TRIM6-TRIM34B2RNG4 842 aa17.76■□□□□ 0.43
PMPCB-201ENST00000249269 PKP1Q13835 747 aa17.76■□□□□ 0.43
PMPCB-201ENST00000249269 C16orf71Q8IYS4 520 aaPredicted RBP17.76■□□□□ 0.43
PMPCB-201ENST00000249269 TRIM34Q9BYJ4 488 aa17.76■□□□□ 0.43
PMPCB-201ENST00000249269 ATP6V1DQ9Y5K8 247 aa17.76■□□□□ 0.43
PMPCB-201ENST00000249269 KLHL33A6NCF5 533 aa17.75■□□□□ 0.43
PMPCB-201ENST00000249269 GPATCH3Q96I76 525 aa17.75■□□□□ 0.43
PMPCB-201ENST00000249269 CCDC61Q9Y6R9 512 aa17.75■□□□□ 0.43
PMPCB-201ENST00000249269 NALCNQ8IZF0 1738 aa17.75■□□□□ 0.43
PMPCB-201ENST00000249269 CRB1P82279 1406 aa17.75■□□□□ 0.43
PMPCB-201ENST00000249269 CTAGE5O15320 804 aa17.75■□□□□ 0.43
PMPCB-201ENST00000249269 HTATSF1O43719 755 aaKnown RBP17.75■□□□□ 0.43
PMPCB-201ENST00000249269 GNAI2P04899 355 aa17.75■□□□□ 0.43
PMPCB-201ENST00000249269 MYRIPQ8NFW9 859 aa17.75■□□□□ 0.43
PMPCB-201ENST00000249269 BABAM1Q9NWV8 329 aa17.75■□□□□ 0.43
PMPCB-201ENST00000249269 AK9Q5TCS8 1911 aa17.75■□□□□ 0.43
PMPCB-201ENST00000249269 ELL2O00472 640 aaPredicted RBP17.74■□□□□ 0.43
PMPCB-201ENST00000249269 ZC3H15Q8WU90 426 aaKnown RBP17.74■□□□□ 0.43
PMPCB-201ENST00000249269 DONSONQ9NYP3 566 aa17.74■□□□□ 0.43
PMPCB-201ENST00000249269 PIBF1Q8WXW3 757 aa17.74■□□□□ 0.43
PMPCB-201ENST00000249269 CACNA1FO60840 1977 aa17.73■□□□□ 0.43
PMPCB-201ENST00000249269 IPO7O95373 1038 aaKnown RBP17.73■□□□□ 0.43
PMPCB-201ENST00000249269 DRC1Q96MC2 740 aa17.73■□□□□ 0.43
PMPCB-201ENST00000249269 LRRCC1Q9C099 1032 aa17.73■□□□□ 0.43
PMPCB-201ENST00000249269 GNL3LQ9NVN8 582 aaKnown RBP17.73■□□□□ 0.43
PMPCB-201ENST00000249269 WDHD1O75717 1129 aaPredicted RBP17.73■□□□□ 0.43
PMPCB-201ENST00000249269 COPB2P35606 906 aa17.73■□□□□ 0.43
PMPCB-201ENST00000249269 KCNJ4P48050 445 aa17.73■□□□□ 0.43
PMPCB-201ENST00000249269 CCDC183Q5T5S1 534 aa17.73■□□□□ 0.43
PMPCB-201ENST00000249269 SNRNP27Q8WVK2 155 aaKnown RBP17.73■□□□□ 0.43
PMPCB-201ENST00000249269 XPCQ01831 940 aaPredicted RBP17.72■□□□□ 0.43
PMPCB-201ENST00000249269 GABBR1Q9UBS5 961 aa17.72■□□□□ 0.43
PMPCB-201ENST00000249269 SYNRGQ9UMZ2 1314 aa17.72■□□□□ 0.43
PMPCB-201ENST00000249269 AMOTL1Q8IY63 956 aa17.72■□□□□ 0.43
PMPCB-201ENST00000249269 MEIS3Q99687 375 aa17.72■□□□□ 0.43
PMPCB-201ENST00000249269 COMMD10Q9Y6G5 202 aa17.72■□□□□ 0.43
PMPCB-201ENST00000249269 MX1P20591 662 aa17.71■□□□□ 0.43
PMPCB-201ENST00000249269 HDGFP51858 240 aaKnown RBP17.71■□□□□ 0.43
PMPCB-201ENST00000249269 C11orf96Q7Z7L8 435 aa17.71■□□□□ 0.43
PMPCB-201ENST00000249269 SPTLC3Q9NUV7 552 aa17.71■□□□□ 0.43
PMPCB-201ENST00000249269 USP31Q70CQ4 1352 aa17.71■□□□□ 0.43
PMPCB-201ENST00000249269 CFAP69A5D8W1 941 aa17.71■□□□□ 0.42
PMPCB-201ENST00000249269 KIF1CO43896 1103 aaKnown RBP17.71■□□□□ 0.42
PMPCB-201ENST00000249269 CHMLP26374 656 aa17.71■□□□□ 0.42
PMPCB-201ENST00000249269 RBM5P52756 815 aaKnown RBP eCLIP17.71■□□□□ 0.42
PMPCB-201ENST00000249269 MICALL1Q8N3F8 863 aa17.71■□□□□ 0.42
PMPCB-201ENST00000249269 OTUD7AQ8TE49 926 aaPredicted RBP17.71■□□□□ 0.42
PMPCB-201ENST00000249269 CCDC194A0A1B0GVG4 234 aa17.7■□□□□ 0.42
PMPCB-201ENST00000249269 ATP8B2P98198 1209 aa17.7■□□□□ 0.42
PMPCB-201ENST00000249269 SF3B2Q13435 895 aaKnown RBP17.7■□□□□ 0.42
PMPCB-201ENST00000249269 NME9Q86XW9 330 aa17.7■□□□□ 0.42
PMPCB-201ENST00000249269 NRXN3Q9Y4C0 1643 aa17.7■□□□□ 0.42
PMPCB-201ENST00000249269 OVOS2A0A0J9YW53 1432 aa17.69■□□□□ 0.42
PMPCB-201ENST00000249269 OVOS2Q6IE36 1432 aa17.69■□□□□ 0.42
PMPCB-201ENST00000249269 CADPS2Q86UW7 1296 aa17.69■□□□□ 0.42
PMPCB-201ENST00000249269 NUDT16Q96DE0 195 aaKnown RBP17.69■□□□□ 0.42
PMPCB-201ENST00000249269 KIAA1522Q9P206 1035 aaPredicted RBP17.69■□□□□ 0.42
PMPCB-201ENST00000249269 HSPA4P34932 840 aa17.69■□□□□ 0.42
PMPCB-201ENST00000249269 UBE2HP62256 183 aa17.69■□□□□ 0.42
PMPCB-201ENST00000249269 BIRC2Q13490 618 aa17.69■□□□□ 0.42
PMPCB-201ENST00000249269 USP25Q9UHP3 1055 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms