RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 IFIT2P09913 472 aaKnown RBP21.43■■□□□ 1.02
PTPN12-201ENST00000248594 ME3Q16798 604 aa21.43■■□□□ 1.02
PTPN12-201ENST00000248594 GNAI2P04899 355 aa21.42■■□□□ 1.02
PTPN12-201ENST00000248594 H2AFXP16104 143 aaPredicted RBP21.42■■□□□ 1.02
PTPN12-201ENST00000248594 FOXR1Q6PIV2 292 aa21.42■■□□□ 1.02
PTPN12-201ENST00000248594 HDGFL2Q7Z4V5 671 aaPredicted RBP21.42■■□□□ 1.02
PTPN12-201ENST00000248594 H3BQV1 296 aa21.42■■□□□ 1.02
PTPN12-201ENST00000248594 IFFO2Q5TF58 517 aa21.42■■□□□ 1.02
PTPN12-201ENST00000248594 SAMD1Q6SPF0 538 aaPredicted RBP21.42■■□□□ 1.02
PTPN12-201ENST00000248594 HSP90B1P14625 803 aaKnown RBP21.42■■□□□ 1.02
PTPN12-201ENST00000248594 CCZ1BP86790 482 aa21.42■■□□□ 1.02
PTPN12-201ENST00000248594 CCZ1P86791 482 aaPredicted RBP21.42■■□□□ 1.02
PTPN12-201ENST00000248594 RNF20Q5VTR2 975 aa21.42■■□□□ 1.02
PTPN12-201ENST00000248594 LARP1Q6PKG0 1096 aaKnown RBP21.42■■□□□ 1.02
PTPN12-201ENST00000248594 DEF6Q9H4E7 631 aa21.42■■□□□ 1.02
PTPN12-201ENST00000248594 SLC52A1Q9NWF4 448 aa21.42■■□□□ 1.02
PTPN12-201ENST00000248594 CYP46A1Q9Y6A2 500 aa21.42■■□□□ 1.02
PTPN12-201ENST00000248594 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.41■■□□□ 1.02
PTPN12-201ENST00000248594 DDX19AQ9NUU7 478 aaKnown RBP21.41■■□□□ 1.02
PTPN12-201ENST00000248594 RNF17Q9BXT8 1623 aaKnown RBP21.41■■□□□ 1.02
PTPN12-201ENST00000248594 SFPQP23246 707 aaKnown RBP eCLIP21.41■■□□□ 1.022e-7■■■■■ 27
PTPN12-201ENST00000248594 LMOD3Q0VAK6 560 aa21.41■■□□□ 1.02
PTPN12-201ENST00000248594 PPP1R13BQ96KQ4 1090 aa21.41■■□□□ 1.02
PTPN12-201ENST00000248594 CLSTN2Q9H4D0 955 aa21.41■■□□□ 1.02
PTPN12-201ENST00000248594 NRDCO43847 1150 aa21.41■■□□□ 1.02
PTPN12-201ENST00000248594 SASH3O75995 380 aa21.41■■□□□ 1.02
PTPN12-201ENST00000248594 FTOQ9C0B1 505 aaKnown RBP eCLIP21.41■■□□□ 1.022e-7■■■□□ 16.1
PTPN12-201ENST00000248594 PTCH1Q13635 1447 aa21.4■■□□□ 1.02
PTPN12-201ENST00000248594 LEO1Q8WVC0 666 aaPredicted RBP21.4■■□□□ 1.02
PTPN12-201ENST00000248594 HECW2Q9P2P5 1572 aa21.4■■□□□ 1.02
PTPN12-201ENST00000248594 NOM1Q5C9Z4 860 aaKnown RBP21.4■■□□□ 1.02
PTPN12-201ENST00000248594 IQGAP1P46940 1657 aa21.4■■□□□ 1.02
PTPN12-201ENST00000248594 SRLQ86TD4 932 aa21.39■■□□□ 1.02
PTPN12-201ENST00000248594 HSP90AA4PQ58FG1 418 aa21.39■■□□□ 1.01
PTPN12-201ENST00000248594 ORC3Q9UBD5 711 aaPredicted RBP21.39■■□□□ 1.01
PTPN12-201ENST00000248594 SDF4Q9BRK5 362 aa21.39■■□□□ 1.01
PTPN12-201ENST00000248594 ADAM21Q9UKJ8 722 aa21.39■■□□□ 1.01
PTPN12-201ENST00000248594 IQGAP3Q86VI3 1631 aa21.39■■□□□ 1.01
PTPN12-201ENST00000248594 MLH3Q9UHC1 1453 aa21.39■■□□□ 1.01
PTPN12-201ENST00000248594 RAB11FIP3O75154 756 aa21.38■■□□□ 1.01
PTPN12-201ENST00000248594 E4F1Q66K89 784 aaPredicted RBP21.38■■□□□ 1.01
PTPN12-201ENST00000248594 RABEP2Q9H5N1 569 aa21.38■■□□□ 1.01
PTPN12-201ENST00000248594 IFNKQ9P0W0 207 aa21.38■■□□□ 1.01
PTPN12-201ENST00000248594 COL9A3Q14050 684 aaPredicted RBP21.38■■□□□ 1.01
PTPN12-201ENST00000248594 SLFNL1Q499Z3 407 aa21.38■■□□□ 1.01
PTPN12-201ENST00000248594 MYCBPQ99417 103 aaPredicted RBP21.38■■□□□ 1.01
PTPN12-201ENST00000248594 VGFO15240 615 aaPredicted RBP21.37■■□□□ 1.01
PTPN12-201ENST00000248594 HYPKQ9NX55 129 aa21.37■■□□□ 1.01
PTPN12-201ENST00000248594 FAM53CQ9NYF3 392 aa21.37■■□□□ 1.01
PTPN12-201ENST00000248594 ATP10DQ9P241 1426 aa21.37■■□□□ 1.01
PTPN12-201ENST00000248594 FRMPD1Q5SYB0 1578 aa21.37■■□□□ 1.01
PTPN12-201ENST00000248594 A0A1B0GUL7 405 aa21.37■■□□□ 1.01
PTPN12-201ENST00000248594 BRPF1P55201 1214 aaPredicted RBP21.37■■□□□ 1.01
PTPN12-201ENST00000248594 GUCY1B3Q02153 619 aa21.37■■□□□ 1.01
PTPN12-201ENST00000248594 PTH1RQ03431 593 aa21.37■■□□□ 1.01
PTPN12-201ENST00000248594 CNPY4Q8N129 248 aa21.37■■□□□ 1.01
PTPN12-201ENST00000248594 PACS2Q86VP3 889 aa21.36■■□□□ 1.01
PTPN12-201ENST00000248594 SIRT1Q96EB6 747 aa21.36■■□□□ 1.01
PTPN12-201ENST00000248594 PGBD1Q96JS3 809 aa21.36■■□□□ 1.01
PTPN12-201ENST00000248594 SLC26A8Q96RN1 970 aa21.36■■□□□ 1.01
PTPN12-201ENST00000248594 SCAND2PQ9GZW5 306 aaPredicted RBP21.36■■□□□ 1.01
PTPN12-201ENST00000248594 SIL1Q9H173 461 aa21.36■■□□□ 1.01
PTPN12-201ENST00000248594 UNC13BO14795 1591 aa21.36■■□□□ 1.01
PTPN12-201ENST00000248594 NEMFO60524 1076 aa21.36■■□□□ 1.01
PTPN12-201ENST00000248594 ARFGAP3Q9NP61 516 aa21.36■■□□□ 1.01
PTPN12-201ENST00000248594 FOXO3O43524 673 aa21.36■■□□□ 1.01
PTPN12-201ENST00000248594 NUTM2GQ5VZR2 741 aa21.36■■□□□ 1.01
PTPN12-201ENST00000248594 TXNDC2Q86VQ3 553 aa21.36■■□□□ 1.01
PTPN12-201ENST00000248594 BANK1Q8NDB2 785 aa21.36■■□□□ 1.01
PTPN12-201ENST00000248594 TPCN1Q9ULQ1 816 aa21.36■■□□□ 1.01
PTPN12-201ENST00000248594 WWC2Q6AWC2 1192 aa21.35■■□□□ 1.01
PTPN12-201ENST00000248594 SULT6B1Q6IMI4 303 aa21.35■■□□□ 1.01
PTPN12-201ENST00000248594 TTC14Q96N46 770 aa21.35■■□□□ 1.01
PTPN12-201ENST00000248594 NPHP3Q7Z494 1330 aa21.35■■□□□ 1.01
PTPN12-201ENST00000248594 KINO60870 393 aaKnown RBP21.35■■□□□ 1.01
PTPN12-201ENST00000248594 CCDC102AQ96A19 550 aa21.35■■□□□ 1.01
PTPN12-201ENST00000248594 FAM212AQ96EL1 285 aa21.35■■□□□ 1.01
PTPN12-201ENST00000248594 CCDC73Q6ZRK6 1079 aa21.35■■□□□ 1.01
PTPN12-201ENST00000248594 CREBRFQ8IUR6 639 aa21.35■■□□□ 1.01
PTPN12-201ENST00000248594 SRRTQ9BXP5 876 aaKnown RBP21.35■■□□□ 1.01
PTPN12-201ENST00000248594 JAK2O60674 1132 aa21.34■■□□□ 1.01
PTPN12-201ENST00000248594 CCAR1Q8IX12 1150 aaKnown RBP21.34■■□□□ 1.01
PTPN12-201ENST00000248594 LTV1Q96GA3 475 aaPredicted RBP21.34■■□□□ 1.01
PTPN12-201ENST00000248594 PIK3R4Q99570 1358 aa21.34■■□□□ 1.01
PTPN12-201ENST00000248594 FBXO18Q8NFZ0 1043 aa21.34■■□□□ 1.01
PTPN12-201ENST00000248594 UTP14AQ9BVJ6 771 aaKnown RBP21.34■■□□□ 1.01
PTPN12-201ENST00000248594 ZKSCAN1P17029 563 aaPredicted RBP21.33■■□□□ 1.01
PTPN12-201ENST00000248594 TRHP20396 242 aaPredicted RBP21.33■■□□□ 1.01
PTPN12-201ENST00000248594 LMOD1P29536 600 aaPredicted RBP21.33■■□□□ 1.01
PTPN12-201ENST00000248594 PDILTQ8N807 584 aa21.33■■□□□ 1.01
PTPN12-201ENST00000248594 XPO4Q9C0E2 1151 aaKnown RBP21.33■■□□□ 1.01
PTPN12-201ENST00000248594 KIF2AO00139 706 aaPredicted RBP21.33■■□□□ 1.01
PTPN12-201ENST00000248594 SGSM2O43147 1006 aa21.33■■□□□ 1.01
PTPN12-201ENST00000248594 OSBPL3Q9H4L5 887 aa21.33■■□□□ 1.01
PTPN12-201ENST00000248594 STX1AQ16623 288 aa21.33■■□□□ 1
PTPN12-201ENST00000248594 ABCA6Q8N139 1617 aa21.33■■□□□ 1
PTPN12-201ENST00000248594 CHRM1P11229 460 aaPredicted RBP21.32■■□□□ 1
PTPN12-201ENST00000248594 ME1P48163 572 aa21.32■■□□□ 1
PTPN12-201ENST00000248594 GNG11P61952 73 aa21.32■■□□□ 1
PTPN12-201ENST00000248594 MICALL1Q8N3F8 863 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms