RNA–Protein interactions for RNA: ENST00000247005.7

GDF1-201, Transcript of growth differentiation factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1-201ENST00000247005 GPT2Q8TD30 523 aa28.99■■■□□ 2.23
GDF1-201ENST00000247005 TTC14Q96N46 770 aa28.99■■■□□ 2.23
GDF1-201ENST00000247005 EDC3Q96F86 508 aaKnown RBP28.98■■■□□ 2.23
GDF1-201ENST00000247005 NMIQ13287 307 aaPredicted RBP28.98■■■□□ 2.23
GDF1-201ENST00000247005 RBM27Q9P2N5 1060 aaKnown RBP28.98■■■□□ 2.23
GDF1-201ENST00000247005 WDR17Q8IZU2 1322 aa28.98■■■□□ 2.23
GDF1-201ENST00000247005 PKD1L3Q7Z443 1732 aa28.97■■■□□ 2.23
GDF1-201ENST00000247005 RUFY3Q7L099 469 aa28.97■■■□□ 2.23
GDF1-201ENST00000247005 STRN4Q9NRL3 753 aa28.97■■■□□ 2.23
GDF1-201ENST00000247005 NSFL1CQ9UNZ2 370 aaKnown RBP28.97■■■□□ 2.23
GDF1-201ENST00000247005 RFX5P48382 616 aaPredicted RBP28.96■■■□□ 2.23
GDF1-201ENST00000247005 PTPN12Q05209 780 aaKnown RBP28.96■■■□□ 2.23
GDF1-201ENST00000247005 SLAIN2Q9P270 581 aa28.96■■■□□ 2.23
GDF1-201ENST00000247005 NDUFB9Q9Y6M9 179 aa28.96■■■□□ 2.23
GDF1-201ENST00000247005 XIRP1Q702N8 1843 aaKnown RBP28.96■■■□□ 2.23
GDF1-201ENST00000247005 TFCP2Q12800 502 aa28.95■■■□□ 2.23
GDF1-201ENST00000247005 TTLL7Q6ZT98 887 aa28.95■■■□□ 2.23
GDF1-201ENST00000247005 FAM43AQ8N2R8 423 aa28.95■■■□□ 2.23
GDF1-201ENST00000247005 ISY1Q9ULR0 285 aaKnown RBP28.95■■■□□ 2.23
GDF1-201ENST00000247005 A1BGP04217 495 aa28.95■■■□□ 2.22
GDF1-201ENST00000247005 ZNF335Q9H4Z2 1342 aaPredicted RBP28.94■■■□□ 2.22
GDF1-201ENST00000247005 ABCC6O95255 1503 aa28.94■■■□□ 2.22
GDF1-201ENST00000247005 JAKMIP1Q96N16 626 aaKnown RBP28.94■■■□□ 2.22
GDF1-201ENST00000247005 FSD1Q9BTV5 496 aa28.94■■■□□ 2.22
GDF1-201ENST00000247005 RRAGDQ9NQL2 400 aaPredicted RBP28.94■■■□□ 2.22
GDF1-201ENST00000247005 A0A0D9SFI3 127 aa28.94■■■□□ 2.22
GDF1-201ENST00000247005 PLBD2Q8NHP8 589 aa28.94■■■□□ 2.22
GDF1-201ENST00000247005 COL9A3Q14050 684 aaPredicted RBP28.93■■■□□ 2.22
GDF1-201ENST00000247005 COPRSQ9NQ92 184 aa28.93■■■□□ 2.22
GDF1-201ENST00000247005 PCDH11XQ9BZA7 1347 aa28.93■■■□□ 2.22
GDF1-201ENST00000247005 PCDH11YQ9BZA8 1340 aa28.93■■■□□ 2.22
GDF1-201ENST00000247005 LARGE1O95461 756 aa28.93■■■□□ 2.22
GDF1-201ENST00000247005 ZSCAN23Q3MJ62 389 aa28.93■■■□□ 2.22
GDF1-201ENST00000247005 CCDC171Q6TFL3 1326 aa28.93■■■□□ 2.22
GDF1-201ENST00000247005 CCDC9Q9Y3X0 531 aaKnown RBP28.92■■■□□ 2.22
GDF1-201ENST00000247005 DBNLQ9UJU6 430 aaKnown RBP28.92■■■□□ 2.22
GDF1-201ENST00000247005 CHMP3Q9Y3E7 222 aa28.92■■■□□ 2.22
GDF1-201ENST00000247005 RBM8AQ9Y5S9 174 aaKnown RBP28.91■■■□□ 2.22
GDF1-201ENST00000247005 NECTIN1Q15223 517 aa28.91■■■□□ 2.22
GDF1-201ENST00000247005 LMBR1LQ6UX01 489 aa28.91■■■□□ 2.22
GDF1-201ENST00000247005 LIMCH1Q9UPQ0 1083 aa28.91■■■□□ 2.22
GDF1-201ENST00000247005 KCNJ4P48050 445 aa28.9■■■□□ 2.22
GDF1-201ENST00000247005 CASP7P55210 303 aa28.9■■■□□ 2.22
GDF1-201ENST00000247005 DNAJC5Q9H3Z4 198 aa28.9■■■□□ 2.22
GDF1-201ENST00000247005 GDPD2Q9HCC8 539 aa28.9■■■□□ 2.22
GDF1-201ENST00000247005 SOS2Q07890 1332 aaPredicted RBP28.9■■■□□ 2.22
GDF1-201ENST00000247005 GLI3P10071 1580 aa28.9■■■□□ 2.22
GDF1-201ENST00000247005 CHGBP05060 677 aa28.9■■■□□ 2.22
GDF1-201ENST00000247005 RABL6Q3YEC7 729 aaPredicted RBP28.9■■■□□ 2.22
GDF1-201ENST00000247005 TNNI3KQ59H18 835 aa28.89■■■□□ 2.22
GDF1-201ENST00000247005 ZBTB3Q9H5J0 574 aa28.89■■■□□ 2.22
GDF1-201ENST00000247005 FPGT-TNNI3KV9GXZ4 949 aa28.89■■■□□ 2.22
GDF1-201ENST00000247005 AFDNP55196 1824 aaKnown RBP28.89■■■□□ 2.22
GDF1-201ENST00000247005 IL2RBP14784 551 aa28.88■■■□□ 2.21
GDF1-201ENST00000247005 PDRG1Q9NUG6 133 aa28.88■■■□□ 2.21
GDF1-201ENST00000247005 COL5A2P05997 1499 aaPredicted RBP28.88■■■□□ 2.21
GDF1-201ENST00000247005 ARFGEF2Q9Y6D5 1785 aa28.88■■■□□ 2.21
GDF1-201ENST00000247005 CREB3L3Q68CJ9 461 aa28.88■■■□□ 2.21
GDF1-201ENST00000247005 ZNF589Q86UQ0 364 aaPredicted RBP28.87■■■□□ 2.21
GDF1-201ENST00000247005 TMEM63CQ9P1W3 806 aa28.87■■■□□ 2.21
GDF1-201ENST00000247005 TAF6LQ9Y6J9 622 aa28.87■■■□□ 2.21
GDF1-201ENST00000247005 MAP4K1Q92918 833 aa28.87■■■□□ 2.21
GDF1-201ENST00000247005 DBNDD2Q9BQY9 259 aa28.87■■■□□ 2.21
GDF1-201ENST00000247005 RPAP1Q9BWH6 1393 aaPredicted RBP28.87■■■□□ 2.21
GDF1-201ENST00000247005 ERVV-2B6SEH9 535 aa28.86■■■□□ 2.21
GDF1-201ENST00000247005 EVA1CP58658 441 aa28.85■■■□□ 2.21
GDF1-201ENST00000247005 CCDC83Q8IWF9 413 aa28.85■■■□□ 2.21
GDF1-201ENST00000247005 ZSWIM6Q9HCJ5 1215 aa28.85■■■□□ 2.21
GDF1-201ENST00000247005 PLEKHG2Q9H7P9 1386 aa28.85■■■□□ 2.21
GDF1-201ENST00000247005 ZNF445P59923 1031 aa28.85■■■□□ 2.21
GDF1-201ENST00000247005 FOXO4P98177 505 aa28.85■■■□□ 2.21
GDF1-201ENST00000247005 CYP46A1Q9Y6A2 500 aa28.85■■■□□ 2.21
GDF1-201ENST00000247005 HIP1O00291 1037 aa28.84■■■□□ 2.21
GDF1-201ENST00000247005 KCNB2Q92953 911 aa28.84■■■□□ 2.21
GDF1-201ENST00000247005 TCEANC2Q96MN5 208 aa28.84■■■□□ 2.21
GDF1-201ENST00000247005 DNAJC2Q99543 621 aaKnown RBP28.84■■■□□ 2.21
GDF1-201ENST00000247005 ZNF330Q9Y3S2 320 aaPredicted RBP28.84■■■□□ 2.21
GDF1-201ENST00000247005 ZKSCAN1P17029 563 aaPredicted RBP28.84■■■□□ 2.21
GDF1-201ENST00000247005 CARD10Q9BWT7 1032 aa28.84■■■□□ 2.21
GDF1-201ENST00000247005 H7C1W4 665 aa28.83■■■□□ 2.21
GDF1-201ENST00000247005 SLC27A2O14975 620 aa28.83■■■□□ 2.21
GDF1-201ENST00000247005 NASPP49321 788 aaPredicted RBP28.83■■■□□ 2.21
GDF1-201ENST00000247005 WDR33Q9C0J8 1336 aaKnown RBP28.83■■■□□ 2.21
GDF1-201ENST00000247005 PRIM1P49642 420 aaKnown RBP28.83■■■□□ 2.21
GDF1-201ENST00000247005 TPRNQ4KMQ1 711 aa28.82■■■□□ 2.2
GDF1-201ENST00000247005 VPS53Q5VIR6 699 aa28.82■■■□□ 2.2
GDF1-201ENST00000247005 ATP5JP18859 108 aa28.82■■■□□ 2.2
GDF1-201ENST00000247005 GADD45BO75293 160 aaPredicted RBP28.81■■■□□ 2.2
GDF1-201ENST00000247005 CWC25Q9NXE8 425 aaPredicted RBP28.81■■■□□ 2.2
GDF1-201ENST00000247005 SMC3Q9UQE7 1217 aa28.81■■■□□ 2.2
GDF1-201ENST00000247005 SYT1P21579 422 aa28.81■■■□□ 2.2
GDF1-201ENST00000247005 NKX1-1Q15270 411 aaPredicted RBP28.81■■■□□ 2.2
GDF1-201ENST00000247005 NECAB1Q8N987 351 aa28.81■■■□□ 2.2
GDF1-201ENST00000247005 SYCE3A1L190 88 aa28.8■■■□□ 2.2
GDF1-201ENST00000247005 ZNF594Q96JF6 807 aaPredicted RBP28.8■■■□□ 2.2
GDF1-201ENST00000247005 TM6SF1Q9BZW5 370 aa28.8■■■□□ 2.2
GDF1-201ENST00000247005 PARP4Q9UKK3 1724 aaKnown RBP28.8■■■□□ 2.2
GDF1-201ENST00000247005 SEC62Q99442 399 aaKnown RBP28.8■■■□□ 2.2
GDF1-201ENST00000247005 RBSNQ9H1K0 784 aa28.8■■■□□ 2.2
GDF1-201ENST00000247005 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms