RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 STX6O43752 255 aa25.98■■□□□ 1.75
SH2D3A-201ENST00000245908 FOXD4L6Q3SYB3 417 aaPredicted RBP25.98■■□□□ 1.75
SH2D3A-201ENST00000245908 FOXD4L3Q6VB84 417 aaPredicted RBP25.98■■□□□ 1.75
SH2D3A-201ENST00000245908 ZSCAN31Q96LW9 406 aaPredicted RBP25.98■■□□□ 1.75
SH2D3A-201ENST00000245908 NLRP2Q9NX02 1062 aa25.98■■□□□ 1.75
SH2D3A-201ENST00000245908 LARGE1O95461 756 aa25.97■■□□□ 1.75
SH2D3A-201ENST00000245908 SYT1P21579 422 aa25.97■■□□□ 1.75
SH2D3A-201ENST00000245908 LARP6Q9BRS8 491 aaKnown RBP25.97■■□□□ 1.75
SH2D3A-201ENST00000245908 CCDC8Q9H0W5 538 aaPredicted RBP25.97■■□□□ 1.75
SH2D3A-201ENST00000245908 CYP46A1Q9Y6A2 500 aa25.97■■□□□ 1.75
SH2D3A-201ENST00000245908 PLEKHG2Q9H7P9 1386 aa25.97■■□□□ 1.75
SH2D3A-201ENST00000245908 GCKRQ14397 625 aa25.97■■□□□ 1.75
SH2D3A-201ENST00000245908 XAGE3Q8WTP9 111 aa25.97■■□□□ 1.75
SH2D3A-201ENST00000245908 METTL22Q9BUU2 404 aaPredicted RBP25.97■■□□□ 1.75
SH2D3A-201ENST00000245908 SH2B1Q9NRF2 756 aaPredicted RBP25.97■■□□□ 1.75
SH2D3A-201ENST00000245908 PHF14O94880 888 aa25.95■■□□□ 1.75
SH2D3A-201ENST00000245908 MYL6BP14649 208 aa25.95■■□□□ 1.75
SH2D3A-201ENST00000245908 NMIQ13287 307 aaPredicted RBP25.95■■□□□ 1.75
SH2D3A-201ENST00000245908 NFATC2IPQ8NCF5 419 aa25.95■■□□□ 1.75
SH2D3A-201ENST00000245908 MAP4K1Q92918 833 aa25.95■■□□□ 1.75
SH2D3A-201ENST00000245908 TSPY26PQ9H489 355 aa25.95■■□□□ 1.75
SH2D3A-201ENST00000245908 TLR7Q9NYK1 1049 aaKnown RBP25.95■■□□□ 1.75
SH2D3A-201ENST00000245908 RBM8AQ9Y5S9 174 aaKnown RBP25.95■■□□□ 1.75
SH2D3A-201ENST00000245908 FAM227BQ96M60 508 aa25.95■■□□□ 1.74
SH2D3A-201ENST00000245908 F13A1P00488 732 aa25.94■■□□□ 1.74
SH2D3A-201ENST00000245908 ZKSCAN1P17029 563 aaPredicted RBP25.94■■□□□ 1.74
SH2D3A-201ENST00000245908 COPS6Q7L5N1 327 aa25.94■■□□□ 1.74
SH2D3A-201ENST00000245908 CREB3L3Q68CJ9 461 aa25.94■■□□□ 1.74
SH2D3A-201ENST00000245908 IFNL2Q8IZJ0 200 aa25.94■■□□□ 1.74
SH2D3A-201ENST00000245908 LRP10Q7Z4F1 713 aa25.93■■□□□ 1.74
SH2D3A-201ENST00000245908 ZNF496Q96IT1 587 aaPredicted RBP25.93■■□□□ 1.74
SH2D3A-201ENST00000245908 MYD88Q99836 296 aa25.93■■□□□ 1.74
SH2D3A-201ENST00000245908 SIL1Q9H173 461 aa25.93■■□□□ 1.74
SH2D3A-201ENST00000245908 CNPY2Q9Y2B0 182 aa25.93■■□□□ 1.74
SH2D3A-201ENST00000245908 PKD1L3Q7Z443 1732 aa25.93■■□□□ 1.74
SH2D3A-201ENST00000245908 MSNP26038 577 aaKnown RBP25.93■■□□□ 1.74
SH2D3A-201ENST00000245908 CCDC83Q8IWF9 413 aa25.93■■□□□ 1.74
SH2D3A-201ENST00000245908 ATP6V1DQ9Y5K8 247 aa25.93■■□□□ 1.74
SH2D3A-201ENST00000245908 EPHA10Q5JZY3 1008 aa25.92■■□□□ 1.74
SH2D3A-201ENST00000245908 AFDNP55196 1824 aaKnown RBP25.92■■□□□ 1.74
SH2D3A-201ENST00000245908 GJB2P29033 226 aa25.91■■□□□ 1.74
SH2D3A-201ENST00000245908 MED23Q9ULK4 1368 aa25.91■■□□□ 1.74
SH2D3A-201ENST00000245908 PDCL3Q9H2J4 239 aa25.91■■□□□ 1.74
SH2D3A-201ENST00000245908 BOLA2Q9H3K6 86 aa25.91■■□□□ 1.74
SH2D3A-201ENST00000245908 NOL7Q9UMY1 257 aaKnown RBP25.91■■□□□ 1.74
SH2D3A-201ENST00000245908 COL15A1P39059 1388 aa25.91■■□□□ 1.74
SH2D3A-201ENST00000245908 SNRPA1P09661 255 aaKnown RBP25.9■■□□□ 1.74
SH2D3A-201ENST00000245908 KLHDC4Q8TBB5 520 aa25.9■■□□□ 1.74
SH2D3A-201ENST00000245908 FSD1Q9BTV5 496 aa25.9■■□□□ 1.74
SH2D3A-201ENST00000245908 JCADQ9P266 1359 aa25.9■■□□□ 1.74
SH2D3A-201ENST00000245908 A0A0D9SFI3 127 aa25.9■■□□□ 1.74
SH2D3A-201ENST00000245908 SLC27A2O14975 620 aa25.9■■□□□ 1.74
SH2D3A-201ENST00000245908 ST3GAL1Q11201 340 aa25.9■■□□□ 1.74
SH2D3A-201ENST00000245908 ANKRD13DQ6ZTN6 518 aa25.9■■□□□ 1.74
SH2D3A-201ENST00000245908 COPRSQ9NQ92 184 aa25.9■■□□□ 1.74
SH2D3A-201ENST00000245908 ARFGEF2Q9Y6D5 1785 aa25.9■■□□□ 1.74
SH2D3A-201ENST00000245908 KCNJ4P48050 445 aa25.89■■□□□ 1.74
SH2D3A-201ENST00000245908 DCAF5Q96JK2 942 aa25.89■■□□□ 1.74
SH2D3A-201ENST00000245908 PSMA5P28066 241 aa25.89■■□□□ 1.73
SH2D3A-201ENST00000245908 UBE2HP62256 183 aa25.89■■□□□ 1.73
SH2D3A-201ENST00000245908 CCDC183Q5T5S1 534 aa25.89■■□□□ 1.73
SH2D3A-201ENST00000245908 RNF214Q8ND24 703 aa25.89■■□□□ 1.73
SH2D3A-201ENST00000245908 MTMR6Q9Y217 621 aa25.89■■□□□ 1.73
SH2D3A-201ENST00000245908 USP16Q9Y5T5 823 aa25.89■■□□□ 1.73
SH2D3A-201ENST00000245908 ME3Q16798 604 aa25.88■■□□□ 1.73
SH2D3A-201ENST00000245908 TTC5Q8N0Z6 440 aa25.88■■□□□ 1.73
SH2D3A-201ENST00000245908 DCCP43146 1447 aa25.88■■□□□ 1.73
SH2D3A-201ENST00000245908 LAMB4A4D0S4 1761 aa25.88■■□□□ 1.73
SH2D3A-201ENST00000245908 RFX5P48382 616 aaPredicted RBP25.88■■□□□ 1.73
SH2D3A-201ENST00000245908 GLI3P10071 1580 aa25.87■■□□□ 1.73
SH2D3A-201ENST00000245908 ATF3P18847 181 aa25.86■■□□□ 1.73
SH2D3A-201ENST00000245908 FMNL2Q96PY5 1086 aa25.86■■□□□ 1.73
SH2D3A-201ENST00000245908 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.86■■□□□ 1.73
SH2D3A-201ENST00000245908 CYP27B1O15528 508 aa25.86■■□□□ 1.73
SH2D3A-201ENST00000245908 CSB-PGBD3P0DP91 1061 aa25.86■■□□□ 1.73
SH2D3A-201ENST00000245908 RABL6Q3YEC7 729 aaPredicted RBP25.86■■□□□ 1.73
SH2D3A-201ENST00000245908 RNF20Q5VTR2 975 aa25.86■■□□□ 1.73
SH2D3A-201ENST00000245908 ALDH8A1Q9H2A2 487 aaPredicted RBP25.85■■□□□ 1.73
SH2D3A-201ENST00000245908 TPCN1Q9ULQ1 816 aa25.85■■□□□ 1.73
SH2D3A-201ENST00000245908 PARP4Q9UKK3 1724 aaKnown RBP25.85■■□□□ 1.73
SH2D3A-201ENST00000245908 LETM1O95202 739 aaPredicted RBP25.85■■□□□ 1.73
SH2D3A-201ENST00000245908 PTPN12Q05209 780 aaKnown RBP25.85■■□□□ 1.73
SH2D3A-201ENST00000245908 DDX54Q8TDD1 881 aaKnown RBP25.85■■□□□ 1.73
SH2D3A-201ENST00000245908 ATP5JP18859 108 aa25.84■■□□□ 1.73
SH2D3A-201ENST00000245908 CSPP1Q1MSJ5 1256 aa25.84■■□□□ 1.73
SH2D3A-201ENST00000245908 FAM184AQ8NB25 1140 aa25.84■■□□□ 1.73
SH2D3A-201ENST00000245908 DDX17Q92841 729 aaKnown RBP25.84■■□□□ 1.73
SH2D3A-201ENST00000245908 CCDC39Q9UFE4 941 aa25.84■■□□□ 1.73
SH2D3A-201ENST00000245908 TNS3Q68CZ2 1445 aa25.84■■□□□ 1.73
SH2D3A-201ENST00000245908 ZNF500O60304 480 aaPredicted RBP25.84■■□□□ 1.73
SH2D3A-201ENST00000245908 OFD1O75665 1012 aa25.84■■□□□ 1.73
SH2D3A-201ENST00000245908 RFX7Q2KHR2 1363 aa25.83■■□□□ 1.73
SH2D3A-201ENST00000245908 PDIA4P13667 645 aaKnown RBP25.83■■□□□ 1.73
SH2D3A-201ENST00000245908 TSGA10IPQ3SY00 556 aa25.83■■□□□ 1.73
SH2D3A-201ENST00000245908 TNNI3KQ59H18 835 aa25.83■■□□□ 1.73
SH2D3A-201ENST00000245908 KLHL34Q8N239 644 aa25.83■■□□□ 1.73
SH2D3A-201ENST00000245908 HMG20BQ9P0W2 317 aa25.83■■□□□ 1.73
SH2D3A-201ENST00000245908 ZKSCAN5Q9Y2L8 839 aa25.83■■□□□ 1.73
SH2D3A-201ENST00000245908 FPGT-TNNI3KV9GXZ4 949 aa25.83■■□□□ 1.73
SH2D3A-201ENST00000245908 TMEM94Q12767 1356 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms