RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 TBC1D2BQ9UPU7 963 aa16.48■□□□□ 0.23
NUP85-201ENST00000245544 AFF2P51816 1311 aa16.48■□□□□ 0.23
NUP85-201ENST00000245544 TRIM6-TRIM34B2RNG4 842 aa16.48■□□□□ 0.23
NUP85-201ENST00000245544 GPTP24298 496 aa16.48■□□□□ 0.23
NUP85-201ENST00000245544 GIGYF2Q6Y7W6 1299 aaKnown RBP16.48■□□□□ 0.23
NUP85-201ENST00000245544 CLASRPQ8N2M8 674 aaKnown RBP16.48■□□□□ 0.23
NUP85-201ENST00000245544 RILPL2Q969X0 211 aa16.48■□□□□ 0.23
NUP85-201ENST00000245544 EAF2Q96CJ1 260 aaPredicted RBP16.48■□□□□ 0.23
NUP85-201ENST00000245544 COPRSQ9NQ92 184 aa16.48■□□□□ 0.23
NUP85-201ENST00000245544 MYH14Q7Z406 1995 aaKnown RBP16.47■□□□□ 0.23
NUP85-201ENST00000245544 EP400Q96L91 3159 aa16.47■□□□□ 0.23
NUP85-201ENST00000245544 CRKLP46109 303 aaKnown RBP16.47■□□□□ 0.23
NUP85-201ENST00000245544 RBM25P49756 843 aaKnown RBP16.47■□□□□ 0.23
NUP85-201ENST00000245544 SYNE4Q8N205 404 aa16.47■□□□□ 0.23
NUP85-201ENST00000245544 AOX1Q06278 1338 aa16.47■□□□□ 0.23
NUP85-201ENST00000245544 IL6STP40189 918 aaPredicted RBP16.46■□□□□ 0.23
NUP85-201ENST00000245544 KCNQ4P56696 695 aa16.46■□□□□ 0.23
NUP85-201ENST00000245544 TRIM28Q13263 835 aaKnown RBP16.46■□□□□ 0.23
NUP85-201ENST00000245544 FAM89AQ96GI7 184 aa16.46■□□□□ 0.23
NUP85-201ENST00000245544 CHMP3Q9Y3E7 222 aa16.46■□□□□ 0.23
NUP85-201ENST00000245544 AACSQ86V21 672 aa16.46■□□□□ 0.23
NUP85-201ENST00000245544 TLR7Q9NYK1 1049 aaKnown RBP16.46■□□□□ 0.23
NUP85-201ENST00000245544 THSD7AQ9UPZ6 1657 aa16.46■□□□□ 0.22
NUP85-201ENST00000245544 EIF5P55010 431 aaKnown RBP16.45■□□□□ 0.22
NUP85-201ENST00000245544 DZIP3Q86Y13 1208 aaKnown RBP16.45■□□□□ 0.22
NUP85-201ENST00000245544 GJD4Q96KN9 370 aaPredicted RBP16.45■□□□□ 0.22
NUP85-201ENST00000245544 KIF2CQ99661 725 aa16.45■□□□□ 0.22
NUP85-201ENST00000245544 CCDC8Q9H0W5 538 aaPredicted RBP16.45■□□□□ 0.22
NUP85-201ENST00000245544 CCDC87Q9NVE4 849 aa16.45■□□□□ 0.22
NUP85-201ENST00000245544 USP42Q9H9J4 1324 aaKnown RBP16.45■□□□□ 0.22
NUP85-201ENST00000245544 NUP98P52948 1817 aa16.45■□□□□ 0.22
NUP85-201ENST00000245544 IFIT2P09913 472 aaKnown RBP16.44■□□□□ 0.22
NUP85-201ENST00000245544 NLRP10Q86W26 655 aa16.44■□□□□ 0.22
NUP85-201ENST00000245544 ZNF594Q96JF6 807 aaPredicted RBP16.43■□□□□ 0.22
NUP85-201ENST00000245544 USP26Q9BXU7 913 aa16.43■□□□□ 0.22
NUP85-201ENST00000245544 TBC1D2Q9BYX2 928 aa16.43■□□□□ 0.22
NUP85-201ENST00000245544 DAXXQ9UER7 740 aaPredicted RBP16.43■□□□□ 0.22
NUP85-201ENST00000245544 PCCAP05165 728 aaPredicted RBP16.43■□□□□ 0.22
NUP85-201ENST00000245544 CHMLP26374 656 aa16.43■□□□□ 0.22
NUP85-201ENST00000245544 TFCP2Q12800 502 aa16.43■□□□□ 0.22
NUP85-201ENST00000245544 CASC1Q6TDU7 716 aa16.43■□□□□ 0.22
NUP85-201ENST00000245544 SMARCC1Q92922 1105 aaPredicted RBP16.43■□□□□ 0.22
NUP85-201ENST00000245544 ZBTB38Q8NAP3 1195 aaPredicted RBP16.42■□□□□ 0.22
NUP85-201ENST00000245544 CCDC85AQ96PX6 553 aaPredicted RBP16.42■□□□□ 0.22
NUP85-201ENST00000245544 IL25Q9H293 177 aa16.42■□□□□ 0.22
NUP85-201ENST00000245544 ECHDC1Q9NTX5 307 aa16.42■□□□□ 0.22
NUP85-201ENST00000245544 TTC41PQ6P2S7 1318 aa16.42■□□□□ 0.22
NUP85-201ENST00000245544 UBN2Q6ZU65 1347 aa16.42■□□□□ 0.22
NUP85-201ENST00000245544 ANKRD36CQ5JPF3 1778 aa16.42■□□□□ 0.22
NUP85-201ENST00000245544 LINC00116Q8NCU8 138 aa16.42■□□□□ 0.22
NUP85-201ENST00000245544 AK9Q5TCS8 1911 aa16.41■□□□□ 0.22
NUP85-201ENST00000245544 ERVV-1B6SEH8 477 aa16.41■□□□□ 0.22
NUP85-201ENST00000245544 ATG9AQ7Z3C6 839 aa16.41■□□□□ 0.22
NUP85-201ENST00000245544 ANP32EQ9BTT0 268 aa16.41■□□□□ 0.22
NUP85-201ENST00000245544 RREB1Q92766 1687 aa16.41■□□□□ 0.22
NUP85-201ENST00000245544 CICQ96RK0 1608 aaPredicted RBP16.41■□□□□ 0.22
NUP85-201ENST00000245544 COL5A3P25940 1745 aaPredicted RBP16.4■□□□□ 0.22
NUP85-201ENST00000245544 ERC2O15083 957 aa16.4■□□□□ 0.22
NUP85-201ENST00000245544 SMIM5Q71RC9 77 aa16.4■□□□□ 0.22
NUP85-201ENST00000245544 ESYT1Q9BSJ8 1104 aa16.4■□□□□ 0.22
NUP85-201ENST00000245544 ATRNO75882 1429 aa16.4■□□□□ 0.22
NUP85-201ENST00000245544 GLRX3O76003 335 aaKnown RBP16.4■□□□□ 0.22
NUP85-201ENST00000245544 LRRC24Q50LG9 513 aa16.4■□□□□ 0.22
NUP85-201ENST00000245544 HSP90AB3PQ58FF7 597 aa16.4■□□□□ 0.22
NUP85-201ENST00000245544 ZNF34Q8IZ26 560 aa16.4■□□□□ 0.22
NUP85-201ENST00000245544 PUS3Q9BZE2 481 aaKnown RBP16.4■□□□□ 0.22
NUP85-201ENST00000245544 BTAF1O14981 1849 aa16.39■□□□□ 0.21
NUP85-201ENST00000245544 BECN1Q14457 450 aa16.39■□□□□ 0.21
NUP85-201ENST00000245544 TNNI3KQ59H18 835 aa16.39■□□□□ 0.21
NUP85-201ENST00000245544 FPGT-TNNI3KV9GXZ4 949 aa16.39■□□□□ 0.21
NUP85-201ENST00000245544 CAMTA2O94983 1202 aa16.39■□□□□ 0.21
NUP85-201ENST00000245544 SEPT12Q8IYM1 358 aa16.39■□□□□ 0.21
NUP85-201ENST00000245544 TRMT112Q9UI30 125 aaKnown RBP16.39■□□□□ 0.21
NUP85-201ENST00000245544 DBNLQ9UJU6 430 aaKnown RBP16.39■□□□□ 0.21
NUP85-201ENST00000245544 TRPC5Q9UL62 973 aaPredicted RBP16.39■□□□□ 0.21
NUP85-201ENST00000245544 ONECUT3O60422 494 aaPredicted RBP16.38■□□□□ 0.21
NUP85-201ENST00000245544 PLA2G12BQ9BX93 195 aa16.38■□□□□ 0.21
NUP85-201ENST00000245544 CSF1RP07333 972 aa16.37■□□□□ 0.21
NUP85-201ENST00000245544 CNTROBQ8N137 903 aa16.37■□□□□ 0.21
NUP85-201ENST00000245544 GPATCH3Q96I76 525 aa16.37■□□□□ 0.21
NUP85-201ENST00000245544 QTRT2Q9H974 415 aaKnown RBP16.37■□□□□ 0.21
NUP85-201ENST00000245544 FAM177BA6PVY3 158 aa16.37■□□□□ 0.21
NUP85-201ENST00000245544 REC8O95072 547 aa16.37■□□□□ 0.21
NUP85-201ENST00000245544 CD2BP2O95400 341 aaKnown RBP16.37■□□□□ 0.21
NUP85-201ENST00000245544 BOLA2Q9H3K6 86 aa16.37■□□□□ 0.21
NUP85-201ENST00000245544 NHSQ6T4R5 1651 aa16.36■□□□□ 0.21
NUP85-201ENST00000245544 CDHR2Q9BYE9 1310 aa16.36■□□□□ 0.21
NUP85-201ENST00000245544 EYA2O00167 538 aa16.36■□□□□ 0.21
NUP85-201ENST00000245544 SUSD4Q5VX71 490 aa16.36■□□□□ 0.21
NUP85-201ENST00000245544 DBNDD2Q9BQY9 259 aa16.36■□□□□ 0.21
NUP85-201ENST00000245544 IRS4O14654 1257 aaPredicted RBP16.36■□□□□ 0.21
NUP85-201ENST00000245544 CCDC57Q2TAC2 916 aa16.36■□□□□ 0.21
NUP85-201ENST00000245544 SPRYD3Q8NCJ5 442 aa16.36■□□□□ 0.21
NUP85-201ENST00000245544 TTLL11Q8NHH1 800 aa16.36■□□□□ 0.21
NUP85-201ENST00000245544 ZNF831Q5JPB2 1677 aa16.35■□□□□ 0.21
NUP85-201ENST00000245544 TIMM10P62072 90 aa16.35■□□□□ 0.21
NUP85-201ENST00000245544 GREM2Q9H772 168 aa16.35■□□□□ 0.21
NUP85-201ENST00000245544 SBF2Q86WG5 1849 aa16.35■□□□□ 0.21
NUP85-201ENST00000245544 IL15P40933 162 aaPredicted RBP16.34■□□□□ 0.21
NUP85-201ENST00000245544 EDC3Q96F86 508 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms