RNA–Protein interactions for RNA: ENST00000243040.10

PFDN5-201, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-201ENST00000243040 SLC4A2P04920 1241 aa13.64□□□□□ -0.23
PFDN5-201ENST00000243040 TRIM28Q13263 835 aaKnown RBP13.64□□□□□ -0.23
PFDN5-201ENST00000243040 DALRD3Q5D0E6 543 aaKnown RBP13.64□□□□□ -0.23
PFDN5-201ENST00000243040 BCS1LQ9Y276 419 aa13.64□□□□□ -0.23
PFDN5-201ENST00000243040 MYH3P11055 1940 aa13.64□□□□□ -0.23
PFDN5-201ENST00000243040 TCERG1O14776 1098 aaKnown RBP13.63□□□□□ -0.23
PFDN5-201ENST00000243040 SRGNP10124 158 aa13.63□□□□□ -0.23
PFDN5-201ENST00000243040 GTF2E1P29083 439 aaPredicted RBP13.63□□□□□ -0.23
PFDN5-201ENST00000243040 FLIIQ13045 1269 aa13.63□□□□□ -0.23
PFDN5-201ENST00000243040 ERFEQ4G0M1 354 aa13.63□□□□□ -0.23
PFDN5-201ENST00000243040 STYK1Q6J9G0 422 aa13.63□□□□□ -0.23
PFDN5-201ENST00000243040 RIC3Q7Z5B4 369 aa13.63□□□□□ -0.23
PFDN5-201ENST00000243040 NUTM1Q86Y26 1132 aa13.63□□□□□ -0.23
PFDN5-201ENST00000243040 ZNF428Q96B54 188 aa13.63□□□□□ -0.23
PFDN5-201ENST00000243040 CDCA7LQ96GN5 454 aa13.63□□□□□ -0.23
PFDN5-201ENST00000243040 MASTLQ96GX5 879 aa13.63□□□□□ -0.23
PFDN5-201ENST00000243040 UTP14AQ9BVJ6 771 aaKnown RBP13.63□□□□□ -0.23
PFDN5-201ENST00000243040 WWC3Q9ULE0 1092 aa13.63□□□□□ -0.23
PFDN5-201ENST00000243040 CRY2Q49AN0 593 aa13.62□□□□□ -0.23
PFDN5-201ENST00000243040 KSR2Q6VAB6 950 aa13.62□□□□□ -0.23
PFDN5-201ENST00000243040 G2E3Q7L622 706 aa13.62□□□□□ -0.23
PFDN5-201ENST00000243040 TTLL6Q8N841 843 aa13.62□□□□□ -0.23
PFDN5-201ENST00000243040 METTL22Q9BUU2 404 aaPredicted RBP13.62□□□□□ -0.23
PFDN5-201ENST00000243040 CT47B1P0C2W7 299 aaPredicted RBP13.61□□□□□ -0.23
PFDN5-201ENST00000243040 HNRNPUQ00839 825 aaKnown RBP eCLIP13.61□□□□□ -0.23
PFDN5-201ENST00000243040 SLC10A5Q5PT55 438 aa13.61□□□□□ -0.23
PFDN5-201ENST00000243040 CNKSR1Q969H4 720 aa13.61□□□□□ -0.23
PFDN5-201ENST00000243040 MAP3K2Q9Y2U5 619 aa13.61□□□□□ -0.23
PFDN5-201ENST00000243040 CCDC88AQ3V6T2 1871 aa13.61□□□□□ -0.23
PFDN5-201ENST00000243040 SH3TC1Q8TE82 1336 aa13.61□□□□□ -0.23
PFDN5-201ENST00000243040 DICER1Q9UPY3 1922 aaKnown RBP13.6□□□□□ -0.23
PFDN5-201ENST00000243040 PI4KAP2A4QPH2 592 aa13.6□□□□□ -0.23
PFDN5-201ENST00000243040 ATP5J2-PTCD1G3V325 749 aa13.6□□□□□ -0.23
PFDN5-201ENST00000243040 NPR1P16066 1061 aa13.6□□□□□ -0.23
PFDN5-201ENST00000243040 PI4KAP1Q8N8J0 262 aa13.6□□□□□ -0.23
PFDN5-201ENST00000243040 CCDC191Q8NCU4 936 aa13.6□□□□□ -0.23
PFDN5-201ENST00000243040 ZNF622Q969S3 477 aaKnown RBP eCLIP13.6□□□□□ -0.23
PFDN5-201ENST00000243040 MYD88Q99836 296 aa13.6□□□□□ -0.23
PFDN5-201ENST00000243040 TRMT112Q9UI30 125 aaKnown RBP13.6□□□□□ -0.23
PFDN5-201ENST00000243040 ZBED9Q6R2W3 1325 aa13.6□□□□□ -0.23
PFDN5-201ENST00000243040 LRRC37AA6NMS7 1700 aa13.59□□□□□ -0.23
PFDN5-201ENST00000243040 TIAM2Q8IVF5 1701 aa13.59□□□□□ -0.23
PFDN5-201ENST00000243040 FKBP5Q13451 457 aaPredicted RBP13.59□□□□□ -0.23
PFDN5-201ENST00000243040 IGKV5-2P06315 115 aa13.58□□□□□ -0.24
PFDN5-201ENST00000243040 HOXA10P31260 410 aaPredicted RBP13.58□□□□□ -0.24
PFDN5-201ENST00000243040 NEXNQ0ZGT2 675 aa13.58□□□□□ -0.24
PFDN5-201ENST00000243040 ALDH1L2Q3SY69 923 aa13.58□□□□□ -0.24
PFDN5-201ENST00000243040 PRPF40BQ6NWY9 871 aaKnown RBP13.58□□□□□ -0.24
PFDN5-201ENST00000243040 DNAAF4Q8WXU2 420 aa13.58□□□□□ -0.24
PFDN5-201ENST00000243040 NLRP3Q96P20 1036 aa13.58□□□□□ -0.24
PFDN5-201ENST00000243040 CWC25Q9NXE8 425 aaPredicted RBP13.58□□□□□ -0.24
PFDN5-201ENST00000243040 SNED1Q8TER0 1413 aa13.57□□□□□ -0.24
PFDN5-201ENST00000243040 TAF1P21675 1872 aa13.57□□□□□ -0.24
PFDN5-201ENST00000243040 YY1P25490 414 aa13.57□□□□□ -0.24
PFDN5-201ENST00000243040 ALDH1B1P30837 517 aa13.57□□□□□ -0.24
PFDN5-201ENST00000243040 C3orf67Q6ZVT6 689 aa13.57□□□□□ -0.24
PFDN5-201ENST00000243040 MRPL50Q8N5N7 158 aaKnown RBP13.57□□□□□ -0.24
PFDN5-201ENST00000243040 ZBTB38Q8NAP3 1195 aaPredicted RBP13.57□□□□□ -0.24
PFDN5-201ENST00000243040 NEURL1BA8MQ27 555 aa13.56□□□□□ -0.24
PFDN5-201ENST00000243040 PCCAP05165 728 aaPredicted RBP13.56□□□□□ -0.24
PFDN5-201ENST00000243040 SOGA3Q5TF21 947 aa13.56□□□□□ -0.24
PFDN5-201ENST00000243040 SYNE4Q8N205 404 aa13.56□□□□□ -0.24
PFDN5-201ENST00000243040 RPGRQ92834 1020 aaKnown RBP13.56□□□□□ -0.24
PFDN5-201ENST00000243040 FAM89AQ96GI7 184 aa13.56□□□□□ -0.24
PFDN5-201ENST00000243040 CRAMP1Q96RY5 1269 aa13.56□□□□□ -0.24
PFDN5-201ENST00000243040 PTPRCP08575 1304 aa13.56□□□□□ -0.24
PFDN5-201ENST00000243040 CDHR2Q9BYE9 1310 aa13.56□□□□□ -0.24
PFDN5-201ENST00000243040 HCLS1P14317 486 aaPredicted RBP13.55□□□□□ -0.24
PFDN5-201ENST00000243040 HSP90B1P14625 803 aaKnown RBP13.55□□□□□ -0.24
PFDN5-201ENST00000243040 BRPF1P55201 1214 aaPredicted RBP13.55□□□□□ -0.24
PFDN5-201ENST00000243040 ARHGAP27Q6ZUM4 889 aa13.55□□□□□ -0.24
PFDN5-201ENST00000243040 LINS1Q8NG48 757 aa13.55□□□□□ -0.24
PFDN5-201ENST00000243040 C7orf43Q8WVR3 580 aa13.55□□□□□ -0.24
PFDN5-201ENST00000243040 SSH1Q8WYL5 1049 aa13.55□□□□□ -0.24
PFDN5-201ENST00000243040 IRS4O14654 1257 aaPredicted RBP13.54□□□□□ -0.24
PFDN5-201ENST00000243040 C21orf2O43822 256 aa13.54□□□□□ -0.24
PFDN5-201ENST00000243040 SF3B3Q15393 1217 aaKnown RBP13.54□□□□□ -0.24
PFDN5-201ENST00000243040 CWF19L2Q2TBE0 894 aaKnown RBP13.54□□□□□ -0.24
PFDN5-201ENST00000243040 RBM17Q96I25 401 aaKnown RBP13.54□□□□□ -0.24
PFDN5-201ENST00000243040 LTBP3Q9NS15 1303 aa13.54□□□□□ -0.24
PFDN5-201ENST00000243040 COL4A1P02462 1669 aa13.53□□□□□ -0.24
PFDN5-201ENST00000243040 F6X3S4 739 aa13.53□□□□□ -0.24
PFDN5-201ENST00000243040 NFKBIEO00221 500 aa13.53□□□□□ -0.24
PFDN5-201ENST00000243040 CCDC93Q567U6 631 aa13.53□□□□□ -0.24
PFDN5-201ENST00000243040 BEND3Q5T5X7 828 aa13.53□□□□□ -0.24
PFDN5-201ENST00000243040 SMC4Q9NTJ3 1288 aa13.53□□□□□ -0.24
PFDN5-201ENST00000243040 ABCC4O15439 1325 aa13.53□□□□□ -0.24
PFDN5-201ENST00000243040 LTBP1Q14766 1721 aa13.53□□□□□ -0.24
PFDN5-201ENST00000243040 SPEF2Q9C093 1822 aa13.53□□□□□ -0.24
PFDN5-201ENST00000243040 PDE8AO60658 829 aa13.52□□□□□ -0.25
PFDN5-201ENST00000243040 RASSF7Q02833 373 aa13.52□□□□□ -0.25
PFDN5-201ENST00000243040 GCKRQ14397 625 aa13.52□□□□□ -0.25
PFDN5-201ENST00000243040 BCL2L13Q9BXK5 485 aa13.52□□□□□ -0.25
PFDN5-201ENST00000243040 ZC3H4Q9UPT8 1303 aaKnown RBP13.51□□□□□ -0.25
PFDN5-201ENST00000243040 H7C1W4 665 aa13.51□□□□□ -0.25
PFDN5-201ENST00000243040 PPEF1O14829 653 aaPredicted RBP13.51□□□□□ -0.25
PFDN5-201ENST00000243040 RARSP54136 660 aaKnown RBP13.51□□□□□ -0.25
PFDN5-201ENST00000243040 CASP7P55210 303 aa13.51□□□□□ -0.25
PFDN5-201ENST00000243040 GRAPQ13588 217 aa13.51□□□□□ -0.25
PFDN5-201ENST00000243040 RTL5Q5HYW3 569 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms