RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 DNAI1Q9UI46 699 aa12.83□□□□□ -0.36
CCDC170-201ENST00000239374 EIF3JO75822 258 aaKnown RBP12.83□□□□□ -0.36
CCDC170-201ENST00000239374 CCDC102AQ96A19 550 aa12.83□□□□□ -0.36
CCDC170-201ENST00000239374 DACH1Q9UI36 760 aa12.83□□□□□ -0.36
CCDC170-201ENST00000239374 TTC41PQ6P2S7 1318 aa12.83□□□□□ -0.36
CCDC170-201ENST00000239374 Q6ZUG5 572 aa12.82□□□□□ -0.36
CCDC170-201ENST00000239374 KIF24Q5T7B8 1368 aa12.82□□□□□ -0.36
CCDC170-201ENST00000239374 UGGT1Q9NYU2 1555 aa12.82□□□□□ -0.36
CCDC170-201ENST00000239374 IMMTQ16891 758 aaKnown RBP12.82□□□□□ -0.36
CCDC170-201ENST00000239374 JARID2Q92833 1246 aaPredicted RBP12.82□□□□□ -0.36
CCDC170-201ENST00000239374 CEP126Q9P2H0 1117 aa12.82□□□□□ -0.36
CCDC170-201ENST00000239374 CASQ1P31415 396 aa12.82□□□□□ -0.36
CCDC170-201ENST00000239374 CCDC150Q8NCX0 1101 aa12.82□□□□□ -0.36
CCDC170-201ENST00000239374 TBC1D2BQ9UPU7 963 aa12.82□□□□□ -0.36
CCDC170-201ENST00000239374 AXDND1Q5T1B0 1012 aaPredicted RBP12.82□□□□□ -0.36
CCDC170-201ENST00000239374 DDX46Q7L014 1031 aaKnown RBP12.82□□□□□ -0.36
CCDC170-201ENST00000239374 RAB11FIP4Q86YS3 637 aa12.82□□□□□ -0.36
CCDC170-201ENST00000239374 SART3Q15020 963 aaKnown RBP12.82□□□□□ -0.36
CCDC170-201ENST00000239374 ARHGAP29Q52LW3 1261 aa12.81□□□□□ -0.36
CCDC170-201ENST00000239374 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.81□□□□□ -0.36
CCDC170-201ENST00000239374 XBP1P17861 261 aa12.81□□□□□ -0.36
CCDC170-201ENST00000239374 ZNF75DP51815 510 aa12.81□□□□□ -0.36
CCDC170-201ENST00000239374 LRMPQ12912 555 aa12.81□□□□□ -0.36
CCDC170-201ENST00000239374 BBXQ8WY36 941 aaPredicted RBP12.81□□□□□ -0.36
CCDC170-201ENST00000239374 CCDC85AQ96PX6 553 aaPredicted RBP12.81□□□□□ -0.36
CCDC170-201ENST00000239374 ZSWIM4Q9H7M6 989 aa12.81□□□□□ -0.36
CCDC170-201ENST00000239374 PYCARDQ9ULZ3 195 aa12.81□□□□□ -0.36
CCDC170-201ENST00000239374 CLASP1Q7Z460 1538 aa12.81□□□□□ -0.36
CCDC170-201ENST00000239374 GOLIM4O00461 696 aa12.81□□□□□ -0.36
CCDC170-201ENST00000239374 CDKL5O76039 1030 aa12.81□□□□□ -0.36
CCDC170-201ENST00000239374 TRIM22Q8IYM9 498 aa12.81□□□□□ -0.36
CCDC170-201ENST00000239374 ABCA8O94911 1581 aa12.81□□□□□ -0.36
CCDC170-201ENST00000239374 PDLIM2Q96JY6 352 aa12.81□□□□□ -0.36
CCDC170-201ENST00000239374 EYA1Q99502 592 aa12.81□□□□□ -0.36
CCDC170-201ENST00000239374 ATP7AQ04656 1500 aa12.8□□□□□ -0.36
CCDC170-201ENST00000239374 GNG11P61952 73 aa12.8□□□□□ -0.36
CCDC170-201ENST00000239374 CDC37L1Q7L3B6 337 aa12.8□□□□□ -0.36
CCDC170-201ENST00000239374 HYPKQ9NX55 129 aa12.8□□□□□ -0.36
CCDC170-201ENST00000239374 TRPM2O94759 1503 aa12.8□□□□□ -0.36
CCDC170-201ENST00000239374 GOLGA8BA8MQT2 603 aa12.8□□□□□ -0.36
CCDC170-201ENST00000239374 IFIT1P09914 478 aaKnown RBP12.8□□□□□ -0.36
CCDC170-201ENST00000239374 CUL4AQ13619 759 aa12.8□□□□□ -0.36
CCDC170-201ENST00000239374 MRPS27Q92552 414 aaKnown RBP12.8□□□□□ -0.36
CCDC170-201ENST00000239374 ORC3Q9UBD5 711 aaPredicted RBP12.8□□□□□ -0.36
CCDC170-201ENST00000239374 LMOD1P29536 600 aaPredicted RBP12.8□□□□□ -0.36
CCDC170-201ENST00000239374 NAP1L1P55209 391 aaKnown RBP12.8□□□□□ -0.36
CCDC170-201ENST00000239374 SYT10Q6XYQ8 523 aa12.8□□□□□ -0.36
CCDC170-201ENST00000239374 UNC5CLQ8IV45 518 aa12.8□□□□□ -0.36
CCDC170-201ENST00000239374 CCDC47Q96A33 483 aaKnown RBP12.8□□□□□ -0.36
CCDC170-201ENST00000239374 USP16Q9Y5T5 823 aa12.8□□□□□ -0.36
CCDC170-201ENST00000239374 HAND2P61296 217 aa12.8□□□□□ -0.36
CCDC170-201ENST00000239374 KLHL10Q6JEL2 608 aa12.8□□□□□ -0.36
CCDC170-201ENST00000239374 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.8□□□□□ -0.36
CCDC170-201ENST00000239374 KIF4BQ2VIQ3 1234 aa12.79□□□□□ -0.36
CCDC170-201ENST00000239374 LIG1P18858 919 aa12.79□□□□□ -0.36
CCDC170-201ENST00000239374 CCDC57Q2TAC2 916 aa12.79□□□□□ -0.36
CCDC170-201ENST00000239374 HSP90AA4PQ58FG1 418 aa12.79□□□□□ -0.36
CCDC170-201ENST00000239374 CLEC17AQ6ZS10 378 aa12.79□□□□□ -0.36
CCDC170-201ENST00000239374 EPB41L2O43491 1005 aaKnown RBP12.79□□□□□ -0.36
CCDC170-201ENST00000239374 TATP17735 454 aaPredicted RBP12.79□□□□□ -0.36
CCDC170-201ENST00000239374 CWF19L2Q2TBE0 894 aaKnown RBP12.79□□□□□ -0.36
CCDC170-201ENST00000239374 CPLX3Q8WVH0 158 aa12.79□□□□□ -0.36
CCDC170-201ENST00000239374 BRMS1Q9HCU9 246 aa12.79□□□□□ -0.36
CCDC170-201ENST00000239374 MARCH6O60337 910 aa12.79□□□□□ -0.36
CCDC170-201ENST00000239374 UBASH3AP57075 661 aa12.79□□□□□ -0.36
CCDC170-201ENST00000239374 CNNM3Q8NE01 707 aa12.79□□□□□ -0.36
CCDC170-201ENST00000239374 LEO1Q8WVC0 666 aaPredicted RBP12.79□□□□□ -0.36
CCDC170-201ENST00000239374 CLSTN2Q9H4D0 955 aa12.79□□□□□ -0.36
CCDC170-201ENST00000239374 H0YHG0 523 aa12.78□□□□□ -0.36
CCDC170-201ENST00000239374 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.78□□□□□ -0.36
CCDC170-201ENST00000239374 NUP133Q8WUM0 1156 aa12.78□□□□□ -0.36
CCDC170-201ENST00000239374 FAM227BQ96M60 508 aa12.78□□□□□ -0.36
CCDC170-201ENST00000239374 MTMR6Q9Y217 621 aa12.78□□□□□ -0.36
CCDC170-201ENST00000239374 PLXNC1O60486 1568 aa12.78□□□□□ -0.36
CCDC170-201ENST00000239374 AOX1Q06278 1338 aa12.78□□□□□ -0.36
CCDC170-201ENST00000239374 NBPF7P0C2Y1 421 aaPredicted RBP12.78□□□□□ -0.36
CCDC170-201ENST00000239374 JAKMIP3Q5VZ66 844 aa12.78□□□□□ -0.36
CCDC170-201ENST00000239374 UBE3BQ7Z3V4 1068 aa12.78□□□□□ -0.36
CCDC170-201ENST00000239374 IFNKQ9P0W0 207 aa12.78□□□□□ -0.36
CCDC170-201ENST00000239374 ZDHHC9Q9Y397 364 aa12.78□□□□□ -0.36
CCDC170-201ENST00000239374 CDC42BPAQ5VT25 1732 aa12.78□□□□□ -0.36
CCDC170-201ENST00000239374 A0A087WZG4 1122 aa12.78□□□□□ -0.36
CCDC170-201ENST00000239374 GTF3C6Q969F1 213 aa12.78□□□□□ -0.36
CCDC170-201ENST00000239374 OSBPL3Q9H4L5 887 aa12.78□□□□□ -0.36
CCDC170-201ENST00000239374 AMOTL2Q9Y2J4 779 aa12.78□□□□□ -0.36
CCDC170-201ENST00000239374 MAP3K19Q56UN5 1328 aa12.78□□□□□ -0.36
CCDC170-201ENST00000239374 RGS12O14924 1447 aa12.78□□□□□ -0.36
CCDC170-201ENST00000239374 ASXL2Q76L83 1435 aa12.78□□□□□ -0.36
CCDC170-201ENST00000239374 GRM8O00222 908 aa12.78□□□□□ -0.36
CCDC170-201ENST00000239374 ME3Q16798 604 aa12.78□□□□□ -0.36
CCDC170-201ENST00000239374 LMAN1P49257 510 aa12.77□□□□□ -0.36
CCDC170-201ENST00000239374 FAM193AP78312 1265 aa12.77□□□□□ -0.36
CCDC170-201ENST00000239374 ELF2Q15723 593 aa12.77□□□□□ -0.36
CCDC170-201ENST00000239374 RASEFQ8IZ41 740 aa12.77□□□□□ -0.36
CCDC170-201ENST00000239374 GTF2E1P29083 439 aaPredicted RBP12.77□□□□□ -0.36
CCDC170-201ENST00000239374 ZSCAN25Q6NSZ9 544 aa12.77□□□□□ -0.36
CCDC170-201ENST00000239374 ERO1AQ96HE7 468 aa12.77□□□□□ -0.36
CCDC170-201ENST00000239374 CNNM1Q9NRU3 951 aa12.77□□□□□ -0.36
CCDC170-201ENST00000239374 SLC27A2O14975 620 aa12.77□□□□□ -0.37
CCDC170-201ENST00000239374 KIF5CO60282 957 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms