RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 LAS1LQ9Y4W2 734 aaKnown RBP11.77□□□□□ -0.53
TGFB3-201ENST00000238682 BCORQ6W2J9 1755 aa11.76□□□□□ -0.53
TGFB3-201ENST00000238682 BRCA1P38398 1863 aaKnown RBP11.76□□□□□ -0.53
TGFB3-201ENST00000238682 STK31Q9BXU1 1019 aa11.76□□□□□ -0.53
TGFB3-201ENST00000238682 API5Q9BZZ5 524 aaKnown RBP11.76□□□□□ -0.53
TGFB3-201ENST00000238682 RIC1Q4ADV7 1423 aa11.75□□□□□ -0.53
TGFB3-201ENST00000238682 DNAJC10Q8IXB1 793 aa11.75□□□□□ -0.53
TGFB3-201ENST00000238682 PIM2Q9P1W9 311 aa11.75□□□□□ -0.53
TGFB3-201ENST00000238682 C1QTNF8P60827 252 aa11.75□□□□□ -0.53
TGFB3-201ENST00000238682 SOGA3Q5TF21 947 aa11.75□□□□□ -0.53
TGFB3-201ENST00000238682 ZKSCAN2Q63HK3 967 aa11.75□□□□□ -0.53
TGFB3-201ENST00000238682 B4GALNT3Q6L9W6 998 aa11.75□□□□□ -0.53
TGFB3-201ENST00000238682 MRPL50Q8N5N7 158 aaKnown RBP11.75□□□□□ -0.53
TGFB3-201ENST00000238682 C8orf58Q8NAV2 365 aa11.75□□□□□ -0.53
TGFB3-201ENST00000238682 ZNF592Q92610 1267 aa11.75□□□□□ -0.53
TGFB3-201ENST00000238682 ZNF652Q9Y2D9 606 aa11.75□□□□□ -0.53
TGFB3-201ENST00000238682 CARMIL3Q8ND23 1372 aa11.74□□□□□ -0.53
TGFB3-201ENST00000238682 POLRMTO00411 1230 aaKnown RBP11.74□□□□□ -0.53
TGFB3-201ENST00000238682 PTCD1O75127 700 aaKnown RBP11.74□□□□□ -0.53
TGFB3-201ENST00000238682 EIF5P55010 431 aaKnown RBP11.74□□□□□ -0.53
TGFB3-201ENST00000238682 CLEC4GQ6UXB4 293 aa11.74□□□□□ -0.53
TGFB3-201ENST00000238682 TRAIPQ9BWF2 469 aa11.74□□□□□ -0.53
TGFB3-201ENST00000238682 WDR70Q9NW82 654 aa11.74□□□□□ -0.53
TGFB3-201ENST00000238682 RBM10P98175 930 aaKnown RBP11.74□□□□□ -0.53
TGFB3-201ENST00000238682 AMIGO3Q86WK7 504 aa11.74□□□□□ -0.53
TGFB3-201ENST00000238682 SMC4Q9NTJ3 1288 aa11.74□□□□□ -0.53
TGFB3-201ENST00000238682 HYPKQ9NX55 129 aa11.74□□□□□ -0.53
TGFB3-201ENST00000238682 DBF4Q9UBU7 674 aaPredicted RBP11.74□□□□□ -0.53
TGFB3-201ENST00000238682 DALRD3Q5D0E6 543 aaKnown RBP11.73□□□□□ -0.53
TGFB3-201ENST00000238682 ARFGEF2Q9Y6D5 1785 aa11.73□□□□□ -0.53
TGFB3-201ENST00000238682 PDE6BP35913 854 aa11.72□□□□□ -0.53
TGFB3-201ENST00000238682 SSH1Q8WYL5 1049 aa11.72□□□□□ -0.53
TGFB3-201ENST00000238682 TNRC6CQ9HCJ0 1690 aaKnown RBP11.72□□□□□ -0.53
TGFB3-201ENST00000238682 MYH14Q7Z406 1995 aaKnown RBP11.72□□□□□ -0.53
TGFB3-201ENST00000238682 GRIPAP1Q4V328 841 aa11.71□□□□□ -0.53
TGFB3-201ENST00000238682 HDGFL1Q5TGJ6 251 aa11.71□□□□□ -0.53
TGFB3-201ENST00000238682 CERS3Q8IU89 383 aa11.71□□□□□ -0.53
TGFB3-201ENST00000238682 DDX21Q9NR30 783 aaKnown RBP eCLIP11.71□□□□□ -0.53
TGFB3-201ENST00000238682 LTBP3Q9NS15 1303 aa11.71□□□□□ -0.53
TGFB3-201ENST00000238682 ATF7IPQ6VMQ6 1270 aa11.71□□□□□ -0.53
TGFB3-201ENST00000238682 RETREG2Q8NC44 543 aa11.71□□□□□ -0.53
TGFB3-201ENST00000238682 DDR1Q08345 913 aa11.7□□□□□ -0.54
TGFB3-201ENST00000238682 ABCC4O15439 1325 aa11.7□□□□□ -0.54
TGFB3-201ENST00000238682 DPEP1P16444 411 aa11.7□□□□□ -0.54
TGFB3-201ENST00000238682 STYK1Q6J9G0 422 aa11.7□□□□□ -0.54
TGFB3-201ENST00000238682 TSPYL6Q8N831 410 aa11.7□□□□□ -0.54
TGFB3-201ENST00000238682 BRIP1Q9BX63 1249 aa11.7□□□□□ -0.54
TGFB3-201ENST00000238682 KDM2BQ8NHM5 1336 aa11.7□□□□□ -0.54
TGFB3-201ENST00000238682 DDX58O95786 925 aaKnown RBP11.69□□□□□ -0.54
TGFB3-201ENST00000238682 USPL1Q5W0Q7 1092 aa11.69□□□□□ -0.54
TGFB3-201ENST00000238682 HDAC5Q9UQL6 1122 aa11.69□□□□□ -0.54
TGFB3-201ENST00000238682 ZBTB1Q9Y2K1 713 aa11.69□□□□□ -0.54
TGFB3-201ENST00000238682 CANXP27824 592 aaKnown RBP11.69□□□□□ -0.54
TGFB3-201ENST00000238682 ZNF496Q96IT1 587 aaPredicted RBP11.69□□□□□ -0.54
TGFB3-201ENST00000238682 ST5P78524 1137 aa11.68□□□□□ -0.54
TGFB3-201ENST00000238682 NFIXQ14938 502 aa11.68□□□□□ -0.54
TGFB3-201ENST00000238682 DZIP1LQ8IYY4 767 aaKnown RBP11.68□□□□□ -0.54
TGFB3-201ENST00000238682 ERVV-1B6SEH8 477 aa11.68□□□□□ -0.54
TGFB3-201ENST00000238682 PLIN1O60240 522 aa11.68□□□□□ -0.54
TGFB3-201ENST00000238682 SERPINB2P05120 415 aa11.68□□□□□ -0.54
TGFB3-201ENST00000238682 CCT4P50991 539 aaKnown RBP11.68□□□□□ -0.54
TGFB3-201ENST00000238682 H0YIN7 160 aa11.67□□□□□ -0.54
TGFB3-201ENST00000238682 FSTL1Q12841 308 aa11.67□□□□□ -0.54
TGFB3-201ENST00000238682 INTS3Q68E01 1043 aaKnown RBP11.67□□□□□ -0.54
TGFB3-201ENST00000238682 CNKSR1Q969H4 720 aa11.67□□□□□ -0.54
TGFB3-201ENST00000238682 DDX19BQ9UMR2 479 aa11.67□□□□□ -0.54
TGFB3-201ENST00000238682 KCNA3P22001 575 aa11.67□□□□□ -0.54
TGFB3-201ENST00000238682 RBM46Q8TBY0 533 aaKnown RBP11.67□□□□□ -0.54
TGFB3-201ENST00000238682 MIS18AQ9NYP9 233 aa11.67□□□□□ -0.54
TGFB3-201ENST00000238682 SRP68Q9UHB9 627 aaKnown RBP11.67□□□□□ -0.54
TGFB3-201ENST00000238682 BCAR3O75815 825 aa11.66□□□□□ -0.54
TGFB3-201ENST00000238682 SLC39A6Q13433 755 aa11.66□□□□□ -0.54
TGFB3-201ENST00000238682 RTL5Q5HYW3 569 aaPredicted RBP11.66□□□□□ -0.54
TGFB3-201ENST00000238682 TTLL6Q8N841 843 aa11.66□□□□□ -0.54
TGFB3-201ENST00000238682 BCL2L12Q9HB09 334 aa11.66□□□□□ -0.54
TGFB3-201ENST00000238682 BCS1LQ9Y276 419 aa11.66□□□□□ -0.54
TGFB3-201ENST00000238682 AFDNP55196 1824 aaKnown RBP11.66□□□□□ -0.54
TGFB3-201ENST00000238682 CAMTA2O94983 1202 aa11.66□□□□□ -0.54
TGFB3-201ENST00000238682 NYXQ9GZU5 481 aa11.66□□□□□ -0.54
TGFB3-201ENST00000238682 CIZ1Q9ULV3 898 aaPredicted RBP11.66□□□□□ -0.54
TGFB3-201ENST00000238682 NOB1Q9ULX3 412 aaKnown RBP11.66□□□□□ -0.54
TGFB3-201ENST00000238682 SEMA3EO15041 775 aa11.65□□□□□ -0.54
TGFB3-201ENST00000238682 MVPQ14764 893 aaKnown RBP11.65□□□□□ -0.54
TGFB3-201ENST00000238682 FTSJ3Q8IY81 847 aaKnown RBP11.65□□□□□ -0.54
TGFB3-201ENST00000238682 SETDB2Q96T68 719 aa11.65□□□□□ -0.54
TGFB3-201ENST00000238682 KCNQ3O43525 872 aa11.65□□□□□ -0.54
TGFB3-201ENST00000238682 RRP9O43818 475 aaKnown RBP11.65□□□□□ -0.54
TGFB3-201ENST00000238682 FLIIQ13045 1269 aa11.65□□□□□ -0.54
TGFB3-201ENST00000238682 CC2D2BQ6DHV5 1058 aa11.65□□□□□ -0.54
TGFB3-201ENST00000238682 EXOC6Q8TAG9 804 aa11.65□□□□□ -0.54
TGFB3-201ENST00000238682 KDM4CQ9H3R0 1056 aa11.65□□□□□ -0.54
TGFB3-201ENST00000238682 A0A0G2JLW4 131 aa11.64□□□□□ -0.55
TGFB3-201ENST00000238682 A0A0U1RQG5 324 aaPredicted RBP11.64□□□□□ -0.55
TGFB3-201ENST00000238682 KLRG2A4D1S0 409 aaPredicted RBP11.64□□□□□ -0.55
TGFB3-201ENST00000238682 ZMYND10O75800 440 aa11.64□□□□□ -0.55
TGFB3-201ENST00000238682 ALDH1L1O75891 902 aa11.64□□□□□ -0.55
TGFB3-201ENST00000238682 TRIM27P14373 513 aa11.64□□□□□ -0.55
TGFB3-201ENST00000238682 ARHGAP27Q6ZUM4 889 aa11.64□□□□□ -0.55
TGFB3-201ENST00000238682 C2CD5Q86YS7 1000 aa11.64□□□□□ -0.55
TGFB3-201ENST00000238682 LMNB1P20700 586 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms