RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 LRMPQ12912 555 aa18.42■□□□□ 0.54
DDX55-201ENST00000238146 NUTM2GQ5VZR2 741 aa18.42■□□□□ 0.54
DDX55-201ENST00000238146 USHBP1Q8N6Y0 703 aa18.42■□□□□ 0.54
DDX55-201ENST00000238146 GPATCH3Q96I76 525 aa18.42■□□□□ 0.54
DDX55-201ENST00000238146 PA2G4Q9UQ80 394 aaKnown RBP18.42■□□□□ 0.54
DDX55-201ENST00000238146 ADCY9O60503 1353 aa18.42■□□□□ 0.54
DDX55-201ENST00000238146 CEMIPQ8WUJ3 1361 aa18.42■□□□□ 0.54
DDX55-201ENST00000238146 KCNJ4P48050 445 aa18.42■□□□□ 0.54
DDX55-201ENST00000238146 DIP2BQ9P265 1576 aa18.42■□□□□ 0.54
DDX55-201ENST00000238146 PLEKHG1Q9ULL1 1385 aa18.41■□□□□ 0.54
DDX55-201ENST00000238146 SLC27A2O14975 620 aa18.41■□□□□ 0.54
DDX55-201ENST00000238146 HOXB7P09629 217 aa18.41■□□□□ 0.54
DDX55-201ENST00000238146 GTPBP4Q9BZE4 634 aaKnown RBP18.41■□□□□ 0.54
DDX55-201ENST00000238146 TFIP11Q9UBB9 837 aaKnown RBP18.41■□□□□ 0.54
DDX55-201ENST00000238146 NRBP1Q9UHY1 535 aa18.41■□□□□ 0.54
DDX55-201ENST00000238146 U2AF2P26368 475 aaKnown RBP eCLIP18.41■□□□□ 0.54
DDX55-201ENST00000238146 SCAND2PQ9GZW5 306 aaPredicted RBP18.41■□□□□ 0.54
DDX55-201ENST00000238146 LGR6Q9HBX8 967 aa18.41■□□□□ 0.54
DDX55-201ENST00000238146 KCNQ3O43525 872 aa18.4■□□□□ 0.54
DDX55-201ENST00000238146 PSMA5P28066 241 aa18.4■□□□□ 0.54
DDX55-201ENST00000238146 NMIQ13287 307 aaPredicted RBP18.4■□□□□ 0.54
DDX55-201ENST00000238146 RBM43Q6ZSC3 357 aaKnown RBP18.4■□□□□ 0.54
DDX55-201ENST00000238146 TCEANC2Q96MN5 208 aa18.4■□□□□ 0.54
DDX55-201ENST00000238146 UBR1Q8IWV7 1749 aa18.4■□□□□ 0.54
DDX55-201ENST00000238146 AACSQ86V21 672 aa18.4■□□□□ 0.54
DDX55-201ENST00000238146 PLA2G4DQ86XP0 818 aa18.4■□□□□ 0.54
DDX55-201ENST00000238146 SPATA32Q96LK8 384 aa18.4■□□□□ 0.54
DDX55-201ENST00000238146 DDX19AQ9NUU7 478 aaKnown RBP18.4■□□□□ 0.54
DDX55-201ENST00000238146 NPHP3Q7Z494 1330 aa18.4■□□□□ 0.54
DDX55-201ENST00000238146 GOLGA6L4A6NEF3 574 aa18.39■□□□□ 0.54
DDX55-201ENST00000238146 ZNF75DP51815 510 aa18.39■□□□□ 0.54
DDX55-201ENST00000238146 DRC7Q8IY82 874 aa18.39■□□□□ 0.54
DDX55-201ENST00000238146 AMOTL2Q9Y2J4 779 aa18.39■□□□□ 0.54
DDX55-201ENST00000238146 TSPOAP1O95153 1857 aa18.39■□□□□ 0.53
DDX55-201ENST00000238146 LARP1Q6PKG0 1096 aaKnown RBP18.39■□□□□ 0.53
DDX55-201ENST00000238146 ERC1Q8IUD2 1116 aa18.39■□□□□ 0.53
DDX55-201ENST00000238146 LEO1Q8WVC0 666 aaPredicted RBP18.39■□□□□ 0.53
DDX55-201ENST00000238146 TRIM5Q9C035 493 aa18.39■□□□□ 0.53
DDX55-201ENST00000238146 CLSTN2Q9H4D0 955 aa18.39■□□□□ 0.53
DDX55-201ENST00000238146 NCBP1Q09161 790 aaKnown RBP18.38■□□□□ 0.53
DDX55-201ENST00000238146 ZSCAN25Q6NSZ9 544 aa18.38■□□□□ 0.53
DDX55-201ENST00000238146 BLOC1S2Q6QNY1 142 aa18.38■□□□□ 0.53
DDX55-201ENST00000238146 TDRD7Q8NHU6 1098 aaKnown RBP18.38■□□□□ 0.53
DDX55-201ENST00000238146 C16orf45Q96MC5 204 aaPredicted RBP18.38■□□□□ 0.53
DDX55-201ENST00000238146 SNRKQ9NRH2 765 aa18.38■□□□□ 0.53
DDX55-201ENST00000238146 C9orf78Q9NZ63 289 aaPredicted RBP18.38■□□□□ 0.53
DDX55-201ENST00000238146 TAF6LQ9Y6J9 622 aa18.38■□□□□ 0.53
DDX55-201ENST00000238146 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.38■□□□□ 0.53
DDX55-201ENST00000238146 CYB5RLQ6IPT4 315 aa18.38■□□□□ 0.53
DDX55-201ENST00000238146 CHD2O14647 1828 aaKnown RBP18.38■□□□□ 0.53
DDX55-201ENST00000238146 HIP1O00291 1037 aa18.37■□□□□ 0.53
DDX55-201ENST00000238146 TOB2Q14106 344 aaPredicted RBP18.37■□□□□ 0.53
DDX55-201ENST00000238146 ANKRD1Q15327 319 aa18.37■□□□□ 0.53
DDX55-201ENST00000238146 A0A0D9SFI3 127 aa18.37■□□□□ 0.53
DDX55-201ENST00000238146 NR1I2O75469 434 aa18.37■□□□□ 0.53
DDX55-201ENST00000238146 RPS6KB1P23443 525 aa18.37■□□□□ 0.53
DDX55-201ENST00000238146 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.37■□□□□ 0.53
DDX55-201ENST00000238146 CHMP4AQ9BY43 222 aa18.37■□□□□ 0.53
DDX55-201ENST00000238146 NPHP4O75161 1426 aaPredicted RBP18.37■□□□□ 0.53
DDX55-201ENST00000238146 RGPD8O14715 1765 aaPredicted RBP18.36■□□□□ 0.53
DDX55-201ENST00000238146 EAF2Q96CJ1 260 aaPredicted RBP18.36■□□□□ 0.53
DDX55-201ENST00000238146 PGBD1Q96JS3 809 aa18.36■□□□□ 0.53
DDX55-201ENST00000238146 ALDH8A1Q9H2A2 487 aaPredicted RBP18.36■□□□□ 0.53
DDX55-201ENST00000238146 SMTNL1A8MU46 457 aa18.36■□□□□ 0.53
DDX55-201ENST00000238146 SASH1O94885 1247 aa18.36■□□□□ 0.53
DDX55-201ENST00000238146 ZNF165P49910 485 aa18.36■□□□□ 0.53
DDX55-201ENST00000238146 MAP3K2Q9Y2U5 619 aa18.36■□□□□ 0.53
DDX55-201ENST00000238146 ADGRL3Q9HAR2 1447 aa18.36■□□□□ 0.53
DDX55-201ENST00000238146 ALDH1L1O75891 902 aa18.36■□□□□ 0.53
DDX55-201ENST00000238146 TNNT1P13805 278 aa18.36■□□□□ 0.53
DDX55-201ENST00000238146 RNF20Q5VTR2 975 aa18.36■□□□□ 0.53
DDX55-201ENST00000238146 DNAJC25Q9H1X3 360 aa18.36■□□□□ 0.53
DDX55-201ENST00000238146 MED1Q15648 1581 aaPredicted RBP18.35■□□□□ 0.53
DDX55-201ENST00000238146 STK3Q13188 491 aa18.35■□□□□ 0.53
DDX55-201ENST00000238146 SYCP1Q15431 976 aa18.35■□□□□ 0.53
DDX55-201ENST00000238146 CCDC8Q9H0W5 538 aaPredicted RBP18.35■□□□□ 0.53
DDX55-201ENST00000238146 CACTINQ8WUQ7 758 aaKnown RBP18.35■□□□□ 0.53
DDX55-201ENST00000238146 FEZ1Q99689 392 aa18.35■□□□□ 0.53
DDX55-201ENST00000238146 DBF4Q9UBU7 674 aaPredicted RBP18.35■□□□□ 0.53
DDX55-201ENST00000238146 CWF19L2Q2TBE0 894 aaKnown RBP18.34■□□□□ 0.53
DDX55-201ENST00000238146 ABTB2Q8N961 1025 aa18.34■□□□□ 0.53
DDX55-201ENST00000238146 DIP2AQ14689 1571 aa18.34■□□□□ 0.53
DDX55-201ENST00000238146 BICD2Q8TD16 824 aa18.34■□□□□ 0.53
DDX55-201ENST00000238146 TLR7Q9NYK1 1049 aaKnown RBP18.34■□□□□ 0.53
DDX55-201ENST00000238146 CLIP2Q9UDT6 1046 aa18.34■□□□□ 0.53
DDX55-201ENST00000238146 KIF20AO95235 890 aa18.33■□□□□ 0.53
DDX55-201ENST00000238146 CCDC144BQ3MJ40 725 aa18.33■□□□□ 0.53
DDX55-201ENST00000238146 CCDC144CPQ8IYA2 1237 aa18.33■□□□□ 0.53
DDX55-201ENST00000238146 BOLA2Q9H3K6 86 aa18.33■□□□□ 0.53
DDX55-201ENST00000238146 MED23Q9ULK4 1368 aa18.33■□□□□ 0.52
DDX55-201ENST00000238146 BTBD11A6QL63 1104 aa18.33■□□□□ 0.52
DDX55-201ENST00000238146 PROSER3Q2NL68 480 aa18.33■□□□□ 0.52
DDX55-201ENST00000238146 KAZALD1Q96I82 304 aa18.33■□□□□ 0.52
DDX55-201ENST00000238146 FSD1Q9BTV5 496 aa18.33■□□□□ 0.52
DDX55-201ENST00000238146 KSR2Q6VAB6 950 aa18.32■□□□□ 0.52
DDX55-201ENST00000238146 ZNF589Q86UQ0 364 aaPredicted RBP18.32■□□□□ 0.52
DDX55-201ENST00000238146 PAXBP1Q9Y5B6 917 aa18.32■□□□□ 0.52
DDX55-201ENST00000238146 MARF1Q9Y4F3 1742 aaKnown RBP18.32■□□□□ 0.52
DDX55-201ENST00000238146 JAK2O60674 1132 aa18.32■□□□□ 0.52
DDX55-201ENST00000238146 TEFQ10587 303 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms