RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 PI4KAP2A4QPH2 592 aa11.29□□□□□ -0.6
HLA-DOA-201ENST00000229829 CWC27Q6UX04 472 aaKnown RBP11.29□□□□□ -0.6
HLA-DOA-201ENST00000229829 PI4KAP1Q8N8J0 262 aa11.29□□□□□ -0.6
HLA-DOA-201ENST00000229829 CHPF2Q9P2E5 772 aa11.29□□□□□ -0.6
HLA-DOA-201ENST00000229829 SNX14Q9Y5W7 946 aa11.29□□□□□ -0.6
HLA-DOA-201ENST00000229829 CHAF1AQ13111 956 aaPredicted RBP11.29□□□□□ -0.6
HLA-DOA-201ENST00000229829 RBM33Q96EV2 1170 aaKnown RBP11.29□□□□□ -0.6
HLA-DOA-201ENST00000229829 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.29□□□□□ -0.6
HLA-DOA-201ENST00000229829 N4BP2Q86UW6 1770 aaPredicted RBP11.28□□□□□ -0.6
HLA-DOA-201ENST00000229829 SGSM2O43147 1006 aa11.28□□□□□ -0.6
HLA-DOA-201ENST00000229829 POLA2Q14181 598 aa11.28□□□□□ -0.6
HLA-DOA-201ENST00000229829 NRXN2Q9P2S2 1712 aa11.28□□□□□ -0.6
HLA-DOA-201ENST00000229829 ZNF500O60304 480 aaPredicted RBP11.28□□□□□ -0.6
HLA-DOA-201ENST00000229829 TERF1P54274 439 aa11.28□□□□□ -0.6
HLA-DOA-201ENST00000229829 AK2P54819 239 aa11.28□□□□□ -0.6
HLA-DOA-201ENST00000229829 HS1BP3Q53T59 392 aa11.28□□□□□ -0.6
HLA-DOA-201ENST00000229829 DDX54Q8TDD1 881 aaKnown RBP11.28□□□□□ -0.6
HLA-DOA-201ENST00000229829 CNPY2Q9Y2B0 182 aa11.28□□□□□ -0.6
HLA-DOA-201ENST00000229829 RPAP1Q9BWH6 1393 aaPredicted RBP11.28□□□□□ -0.6
HLA-DOA-201ENST00000229829 LSG1Q9H089 658 aaKnown RBP11.27□□□□□ -0.61
HLA-DOA-201ENST00000229829 TNS3Q68CZ2 1445 aa11.27□□□□□ -0.61
HLA-DOA-201ENST00000229829 TOGARAM1Q9Y4F4 1720 aa11.27□□□□□ -0.61
HLA-DOA-201ENST00000229829 UTP14CQ5TAP6 766 aaKnown RBP11.27□□□□□ -0.61
HLA-DOA-201ENST00000229829 NBPF6Q5VWK0 638 aa11.27□□□□□ -0.61
HLA-DOA-201ENST00000229829 RUFY3Q7L099 469 aa11.27□□□□□ -0.61
HLA-DOA-201ENST00000229829 IL17RAQ96F46 866 aa11.27□□□□□ -0.61
HLA-DOA-201ENST00000229829 NBPF4Q96M43 638 aa11.27□□□□□ -0.61
HLA-DOA-201ENST00000229829 TSPY26PQ9H489 355 aa11.27□□□□□ -0.61
HLA-DOA-201ENST00000229829 RAD50Q92878 1312 aa11.27□□□□□ -0.61
HLA-DOA-201ENST00000229829 CACNA1FO60840 1977 aa11.27□□□□□ -0.61
HLA-DOA-201ENST00000229829 LETM1O95202 739 aaPredicted RBP11.26□□□□□ -0.61
HLA-DOA-201ENST00000229829 LARGE1O95461 756 aa11.26□□□□□ -0.61
HLA-DOA-201ENST00000229829 EIF4A1P60842 406 aaKnown RBP11.26□□□□□ -0.61
HLA-DOA-201ENST00000229829 BEND3Q5T5X7 828 aa11.26□□□□□ -0.61
HLA-DOA-201ENST00000229829 TTC14Q96N46 770 aa11.26□□□□□ -0.61
HLA-DOA-201ENST00000229829 USP25Q9UHP3 1055 aa11.26□□□□□ -0.61
HLA-DOA-201ENST00000229829 JCADQ9P266 1359 aa11.26□□□□□ -0.61
HLA-DOA-201ENST00000229829 SPC24Q8NBT2 197 aa11.26□□□□□ -0.61
HLA-DOA-201ENST00000229829 ZBTB9Q96C00 473 aa11.26□□□□□ -0.61
HLA-DOA-201ENST00000229829 KIF1BPQ96EK5 621 aa11.26□□□□□ -0.61
HLA-DOA-201ENST00000229829 GTPBP4Q9BZE4 634 aaKnown RBP11.26□□□□□ -0.61
HLA-DOA-201ENST00000229829 TMEM51Q9NW97 253 aa11.26□□□□□ -0.61
HLA-DOA-201ENST00000229829 WDR33Q9C0J8 1336 aaKnown RBP11.26□□□□□ -0.61
HLA-DOA-201ENST00000229829 RAB11FIP3O75154 756 aa11.26□□□□□ -0.61
HLA-DOA-201ENST00000229829 KIF20AO95235 890 aa11.26□□□□□ -0.61
HLA-DOA-201ENST00000229829 AOX1Q06278 1338 aa11.26□□□□□ -0.61
HLA-DOA-201ENST00000229829 PTH1RQ03431 593 aa11.25□□□□□ -0.61
HLA-DOA-201ENST00000229829 DNAAF4Q8WXU2 420 aa11.25□□□□□ -0.61
HLA-DOA-201ENST00000229829 PA2G4Q9UQ80 394 aaKnown RBP11.25□□□□□ -0.61
HLA-DOA-201ENST00000229829 SYT1P21579 422 aa11.25□□□□□ -0.61
HLA-DOA-201ENST00000229829 COL9A3Q14050 684 aaPredicted RBP11.25□□□□□ -0.61
HLA-DOA-201ENST00000229829 ADCK5Q3MIX3 580 aa11.25□□□□□ -0.61
HLA-DOA-201ENST00000229829 MPRIPQ6WCQ1 1025 aa11.25□□□□□ -0.61
HLA-DOA-201ENST00000229829 MYRIPQ8NFW9 859 aa11.25□□□□□ -0.61
HLA-DOA-201ENST00000229829 LRRC59Q96AG4 307 aaKnown RBP11.25□□□□□ -0.61
HLA-DOA-201ENST00000229829 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.25□□□□□ -0.61
HLA-DOA-201ENST00000229829 BCL9LQ86UU0 1499 aa11.24□□□□□ -0.61
HLA-DOA-201ENST00000229829 CASTP20810 708 aaKnown RBP11.24□□□□□ -0.61
HLA-DOA-201ENST00000229829 OS9Q13438 667 aaPredicted RBP11.24□□□□□ -0.61
HLA-DOA-201ENST00000229829 CNTROBQ8N137 903 aa11.24□□□□□ -0.61
HLA-DOA-201ENST00000229829 BCL2L12Q9HB09 334 aa11.24□□□□□ -0.61
HLA-DOA-201ENST00000229829 PRAMEF22A3QJZ6 481 aa11.24□□□□□ -0.61
HLA-DOA-201ENST00000229829 NPHP1O15259 732 aa11.24□□□□□ -0.61
HLA-DOA-201ENST00000229829 PXDNLA1KZ92 1463 aa11.24□□□□□ -0.61
HLA-DOA-201ENST00000229829 PROSER3Q2NL68 480 aa11.23□□□□□ -0.61
HLA-DOA-201ENST00000229829 ZNF710Q8N1W2 664 aa11.23□□□□□ -0.61
HLA-DOA-201ENST00000229829 ZNF592Q92610 1267 aa11.23□□□□□ -0.61
HLA-DOA-201ENST00000229829 FIBPO43427 364 aa11.23□□□□□ -0.61
HLA-DOA-201ENST00000229829 STX6O43752 255 aa11.23□□□□□ -0.61
HLA-DOA-201ENST00000229829 NPM3O75607 178 aaKnown RBP11.23□□□□□ -0.61
HLA-DOA-201ENST00000229829 ZSCAN22P10073 491 aaPredicted RBP11.23□□□□□ -0.61
HLA-DOA-201ENST00000229829 NOLC1Q14978 699 aaKnown RBP eCLIP11.23□□□□□ -0.61
HLA-DOA-201ENST00000229829 IPO4Q8TEX9 1081 aaKnown RBP11.23□□□□□ -0.61
HLA-DOA-201ENST00000229829 BABAM1Q9NWV8 329 aa11.23□□□□□ -0.61
HLA-DOA-201ENST00000229829 LIMCH1Q9UPQ0 1083 aa11.23□□□□□ -0.61
HLA-DOA-201ENST00000229829 CEMIPQ8WUJ3 1361 aa11.23□□□□□ -0.61
HLA-DOA-201ENST00000229829 MRC1P22897 1456 aa11.23□□□□□ -0.61
HLA-DOA-201ENST00000229829 ADCY9O60503 1353 aa11.23□□□□□ -0.61
HLA-DOA-201ENST00000229829 HMGN5P82970 282 aaKnown RBP11.23□□□□□ -0.61
HLA-DOA-201ENST00000229829 CWF19L2Q2TBE0 894 aaKnown RBP11.23□□□□□ -0.61
HLA-DOA-201ENST00000229829 CCDC83Q8IWF9 413 aa11.23□□□□□ -0.61
HLA-DOA-201ENST00000229829 SYAP1Q96A49 352 aaPredicted RBP11.23□□□□□ -0.61
HLA-DOA-201ENST00000229829 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.22□□□□□ -0.61
HLA-DOA-201ENST00000229829 HCLS1P14317 486 aaPredicted RBP11.22□□□□□ -0.61
HLA-DOA-201ENST00000229829 PRPF40BQ6NWY9 871 aaKnown RBP11.22□□□□□ -0.61
HLA-DOA-201ENST00000229829 ZFP91Q96JP5 570 aaPredicted RBP11.22□□□□□ -0.61
HLA-DOA-201ENST00000229829 BTBD11A6QL63 1104 aa11.22□□□□□ -0.61
HLA-DOA-201ENST00000229829 TNNT3P45378 269 aaPredicted RBP11.22□□□□□ -0.61
HLA-DOA-201ENST00000229829 HYPKQ9NX55 129 aa11.22□□□□□ -0.61
HLA-DOA-201ENST00000229829 ZNF335Q9H4Z2 1342 aaPredicted RBP11.22□□□□□ -0.61
HLA-DOA-201ENST00000229829 JAKMIP1Q96N16 626 aaKnown RBP11.22□□□□□ -0.61
HLA-DOA-201ENST00000229829 SMC3Q9UQE7 1217 aa11.22□□□□□ -0.61
HLA-DOA-201ENST00000229829 SCN11AQ9UI33 1791 aa11.21□□□□□ -0.61
HLA-DOA-201ENST00000229829 DIAPH3Q9NSV4 1193 aa11.21□□□□□ -0.61
HLA-DOA-201ENST00000229829 MAP3K2Q9Y2U5 619 aa11.21□□□□□ -0.61
HLA-DOA-201ENST00000229829 LAMB4A4D0S4 1761 aa11.21□□□□□ -0.61
HLA-DOA-201ENST00000229829 BCORQ6W2J9 1755 aa11.21□□□□□ -0.61
HLA-DOA-201ENST00000229829 EPB41L2O43491 1005 aaKnown RBP11.21□□□□□ -0.62
HLA-DOA-201ENST00000229829 F13A1P00488 732 aa11.21□□□□□ -0.62
HLA-DOA-201ENST00000229829 GJB2P29033 226 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms