RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 TMEM2Q9UHN6 1383 aa18.35■□□□□ 0.53
VTN-201ENST00000226218 NUTM2FA1L443 756 aa18.35■□□□□ 0.53
VTN-201ENST00000226218 AMPHP49418 695 aa18.35■□□□□ 0.53
VTN-201ENST00000226218 HDGFP51858 240 aaKnown RBP18.35■□□□□ 0.53
VTN-201ENST00000226218 FAM173BQ6P4H8 233 aa18.35■□□□□ 0.53
VTN-201ENST00000226218 TNMDQ9H2S6 317 aa18.35■□□□□ 0.53
VTN-201ENST00000226218 ECHDC1Q9NTX5 307 aa18.35■□□□□ 0.53
VTN-201ENST00000226218 RBM8AQ9Y5S9 174 aaKnown RBP18.35■□□□□ 0.53
VTN-201ENST00000226218 NPHP3Q7Z494 1330 aa18.35■□□□□ 0.53
VTN-201ENST00000226218 PDCP20941 246 aa18.35■□□□□ 0.53
VTN-201ENST00000226218 CDC25BP30305 580 aa18.34■□□□□ 0.53
VTN-201ENST00000226218 FERMT3Q86UX7 667 aa18.34■□□□□ 0.53
VTN-201ENST00000226218 CKAP2LQ8IYA6 745 aa18.34■□□□□ 0.53
VTN-201ENST00000226218 DNAAF4Q8WXU2 420 aa18.34■□□□□ 0.53
VTN-201ENST00000226218 EVI5LQ96CN4 794 aa18.34■□□□□ 0.53
VTN-201ENST00000226218 SCAND2PQ9GZW5 306 aaPredicted RBP18.34■□□□□ 0.53
VTN-201ENST00000226218 ADCY9O60503 1353 aa18.34■□□□□ 0.53
VTN-201ENST00000226218 JCADQ9P266 1359 aa18.34■□□□□ 0.53
VTN-201ENST00000226218 C16orf45Q96MC5 204 aaPredicted RBP18.34■□□□□ 0.53
VTN-201ENST00000226218 SLC27A2O14975 620 aa18.33■□□□□ 0.52
VTN-201ENST00000226218 ZKSCAN1P17029 563 aaPredicted RBP18.33■□□□□ 0.52
VTN-201ENST00000226218 CLASRPQ8N2M8 674 aaKnown RBP18.33■□□□□ 0.52
VTN-201ENST00000226218 DDX54Q8TDD1 881 aaKnown RBP18.33■□□□□ 0.52
VTN-201ENST00000226218 LEO1Q8WVC0 666 aaPredicted RBP18.33■□□□□ 0.52
VTN-201ENST00000226218 PAXBP1Q9Y5B6 917 aa18.33■□□□□ 0.52
VTN-201ENST00000226218 HOXB7P09629 217 aa18.32■□□□□ 0.52
VTN-201ENST00000226218 TNNT1P13805 278 aa18.32■□□□□ 0.52
VTN-201ENST00000226218 CACTINQ8WUQ7 758 aaKnown RBP18.32■□□□□ 0.52
VTN-201ENST00000226218 HOXC9P31274 260 aa18.32■□□□□ 0.52
VTN-201ENST00000226218 PGBD1Q96JS3 809 aa18.32■□□□□ 0.52
VTN-201ENST00000226218 CHMP3Q9Y3E7 222 aa18.32■□□□□ 0.52
VTN-201ENST00000226218 PI4KAP2A4QPH2 592 aa18.31■□□□□ 0.52
VTN-201ENST00000226218 GIGYF1O75420 1035 aaPredicted RBP18.31■□□□□ 0.52
VTN-201ENST00000226218 PSMA5P28066 241 aa18.31■□□□□ 0.52
VTN-201ENST00000226218 EIF4A1P60842 406 aaKnown RBP18.31■□□□□ 0.52
VTN-201ENST00000226218 TOB2Q14106 344 aaPredicted RBP18.31■□□□□ 0.52
VTN-201ENST00000226218 CCDC144BQ3MJ40 725 aa18.31■□□□□ 0.52
VTN-201ENST00000226218 CCDC144CPQ8IYA2 1237 aa18.31■□□□□ 0.52
VTN-201ENST00000226218 PI4KAP1Q8N8J0 262 aa18.31■□□□□ 0.52
VTN-201ENST00000226218 SPATA32Q96LK8 384 aa18.31■□□□□ 0.52
VTN-201ENST00000226218 TRIM5Q9C035 493 aa18.31■□□□□ 0.52
VTN-201ENST00000226218 DDX41Q9UJV9 622 aaKnown RBP18.31■□□□□ 0.52
VTN-201ENST00000226218 LARP1Q6PKG0 1096 aaKnown RBP18.31■□□□□ 0.52
VTN-201ENST00000226218 CGNQ9P2M7 1197 aaKnown RBP18.31■□□□□ 0.52
VTN-201ENST00000226218 MED23Q9ULK4 1368 aa18.3■□□□□ 0.52
VTN-201ENST00000226218 RPS6KB1P23443 525 aa18.3■□□□□ 0.52
VTN-201ENST00000226218 NMIQ13287 307 aaPredicted RBP18.3■□□□□ 0.52
VTN-201ENST00000226218 ANKRD1Q15327 319 aa18.3■□□□□ 0.52
VTN-201ENST00000226218 SARM1Q6SZW1 724 aa18.3■□□□□ 0.52
VTN-201ENST00000226218 FAM227BQ96M60 508 aa18.3■□□□□ 0.52
VTN-201ENST00000226218 CHPF2Q9P2E5 772 aa18.3■□□□□ 0.52
VTN-201ENST00000226218 PLEKHG1Q9ULL1 1385 aa18.3■□□□□ 0.52
VTN-201ENST00000226218 LMO7Q8WWI1 1683 aa18.3■□□□□ 0.52
VTN-201ENST00000226218 NR1I2O75469 434 aa18.29■□□□□ 0.52
VTN-201ENST00000226218 GPATCH3Q96I76 525 aa18.29■□□□□ 0.52
VTN-201ENST00000226218 HIP1O00291 1037 aa18.29■□□□□ 0.52
VTN-201ENST00000226218 CAVIN2O95810 425 aa18.29■□□□□ 0.52
VTN-201ENST00000226218 ZNF165P49910 485 aa18.29■□□□□ 0.52
VTN-201ENST00000226218 RBM6P78332 1123 aaKnown RBP18.29■□□□□ 0.52
VTN-201ENST00000226218 GABPB1Q06547 395 aaPredicted RBP18.29■□□□□ 0.52
VTN-201ENST00000226218 OS9Q13438 667 aaPredicted RBP18.29■□□□□ 0.52
VTN-201ENST00000226218 IQCB1Q15051 598 aa18.29■□□□□ 0.52
VTN-201ENST00000226218 DRC7Q8IY82 874 aa18.29■□□□□ 0.52
VTN-201ENST00000226218 DNAJC25Q9H1X3 360 aa18.29■□□□□ 0.52
VTN-201ENST00000226218 MORC2Q9Y6X9 1032 aaPredicted RBP18.29■□□□□ 0.52
VTN-201ENST00000226218 TSPOAP1O95153 1857 aa18.29■□□□□ 0.52
VTN-201ENST00000226218 NAA30Q147X3 362 aaPredicted RBP18.28■□□□□ 0.52
VTN-201ENST00000226218 TSGA10IPQ3SY00 556 aa18.28■□□□□ 0.52
VTN-201ENST00000226218 ERC1Q8IUD2 1116 aa18.28■□□□□ 0.52
VTN-201ENST00000226218 TFIP11Q9UBB9 837 aaKnown RBP18.28■□□□□ 0.52
VTN-201ENST00000226218 CLIP2Q9UDT6 1046 aa18.28■□□□□ 0.52
VTN-201ENST00000226218 TAF6LQ9Y6J9 622 aa18.28■□□□□ 0.52
VTN-201ENST00000226218 TNRQ92752 1358 aa18.28■□□□□ 0.52
VTN-201ENST00000226218 RESTQ13127 1097 aa18.28■□□□□ 0.52
VTN-201ENST00000226218 BLOC1S2Q6QNY1 142 aa18.28■□□□□ 0.52
VTN-201ENST00000226218 CCDC112Q8NEF3 446 aa18.28■□□□□ 0.52
VTN-201ENST00000226218 IFIT2P09913 472 aaKnown RBP18.27■□□□□ 0.52
VTN-201ENST00000226218 EIF2S2P20042 333 aaKnown RBP18.27■□□□□ 0.52
VTN-201ENST00000226218 MLECQ14165 292 aa18.27■□□□□ 0.52
VTN-201ENST00000226218 LTN1O94822 1766 aa18.27■□□□□ 0.51
VTN-201ENST00000226218 SLIT1O75093 1534 aa18.26■□□□□ 0.51
VTN-201ENST00000226218 A0A0D9SFI3 127 aa18.26■□□□□ 0.51
VTN-201ENST00000226218 GOLGA6L4A6NEF3 574 aa18.26■□□□□ 0.51
VTN-201ENST00000226218 NYAP1Q6ZVC0 841 aa18.26■□□□□ 0.51
VTN-201ENST00000226218 LRRC8AQ8IWT6 810 aa18.26■□□□□ 0.51
VTN-201ENST00000226218 PA2G4Q9UQ80 394 aaKnown RBP18.26■□□□□ 0.51
VTN-201ENST00000226218 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.26■□□□□ 0.51
VTN-201ENST00000226218 MRC1P22897 1456 aa18.26■□□□□ 0.51
VTN-201ENST00000226218 TPD52L1Q16890 204 aaPredicted RBP18.26■□□□□ 0.51
VTN-201ENST00000226218 KIF18AQ8NI77 898 aa18.26■□□□□ 0.51
VTN-201ENST00000226218 MRFAP1L1Q96HT8 127 aa18.26■□□□□ 0.51
VTN-201ENST00000226218 FAM53CQ9NYF3 392 aa18.26■□□□□ 0.51
VTN-201ENST00000226218 ALDH1L1O75891 902 aa18.25■□□□□ 0.51
VTN-201ENST00000226218 AACSQ86V21 672 aa18.25■□□□□ 0.51
VTN-201ENST00000226218 TCEANC2Q96MN5 208 aa18.25■□□□□ 0.51
VTN-201ENST00000226218 SASH1O94885 1247 aa18.25■□□□□ 0.51
VTN-201ENST00000226218 KCNJ4P48050 445 aa18.25■□□□□ 0.51
VTN-201ENST00000226218 CEP135Q66GS9 1140 aa18.25■□□□□ 0.51
VTN-201ENST00000226218 KCND1Q9NSA2 647 aa18.25■□□□□ 0.51
VTN-201ENST00000226218 USP27XA6NNY8 438 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms