RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 RIMBP3CA6NJZ7 1639 aa16.95■□□□□ 0.3
SFXN3-201ENST00000224807 RIMBP3BA6NNM3 1639 aa16.95■□□□□ 0.3
SFXN3-201ENST00000224807 RIMBP3Q9UFD9 1639 aa16.95■□□□□ 0.3
SFXN3-201ENST00000224807 CLASRPQ8N2M8 674 aaKnown RBP16.95■□□□□ 0.3
SFXN3-201ENST00000224807 FSD1Q9BTV5 496 aa16.95■□□□□ 0.3
SFXN3-201ENST00000224807 NEO1Q92859 1461 aa16.95■□□□□ 0.3
SFXN3-201ENST00000224807 TUBGCP6Q96RT7 1819 aa16.95■□□□□ 0.3
SFXN3-201ENST00000224807 ST3GAL1Q11201 340 aa16.95■□□□□ 0.3
SFXN3-201ENST00000224807 PI4K2BQ8TCG2 481 aa16.95■□□□□ 0.3
SFXN3-201ENST00000224807 SMTNL1A8MU46 457 aa16.94■□□□□ 0.3
SFXN3-201ENST00000224807 KMT5BQ4FZB7 885 aa16.94■□□□□ 0.3
SFXN3-201ENST00000224807 HSP90AA4PQ58FG1 418 aa16.94■□□□□ 0.3
SFXN3-201ENST00000224807 STK11IPQ8N1F8 1099 aa16.94■□□□□ 0.3
SFXN3-201ENST00000224807 C11orf57Q6ZUT1 292 aaPredicted RBP16.94■□□□□ 0.3
SFXN3-201ENST00000224807 HOMER1Q86YM7 354 aa16.94■□□□□ 0.3
SFXN3-201ENST00000224807 RAB11FIP4Q86YS3 637 aa16.94■□□□□ 0.3
SFXN3-201ENST00000224807 SMC2O95347 1197 aa16.93■□□□□ 0.3
SFXN3-201ENST00000224807 ERCC6LQ2NKX8 1250 aa16.93■□□□□ 0.3
SFXN3-201ENST00000224807 FBXO38Q6PIJ6 1188 aa16.93■□□□□ 0.3
SFXN3-201ENST00000224807 BLOC1S2Q6QNY1 142 aa16.93■□□□□ 0.3
SFXN3-201ENST00000224807 KIF1BPQ96EK5 621 aa16.93■□□□□ 0.3
SFXN3-201ENST00000224807 NRKQ7Z2Y5 1582 aa16.93■□□□□ 0.3
SFXN3-201ENST00000224807 SETD1AO15047 1707 aaKnown RBP16.93■□□□□ 0.3
SFXN3-201ENST00000224807 CCT2P78371 535 aaKnown RBP16.93■□□□□ 0.3
SFXN3-201ENST00000224807 CRB1P82279 1406 aa16.92■□□□□ 0.3
SFXN3-201ENST00000224807 MON2Q7Z3U7 1717 aa16.92■□□□□ 0.3
SFXN3-201ENST00000224807 CCDC69A6NI79 296 aa16.92■□□□□ 0.3
SFXN3-201ENST00000224807 NMIQ13287 307 aaPredicted RBP16.92■□□□□ 0.3
SFXN3-201ENST00000224807 CCAR2Q8N163 923 aaKnown RBP16.92■□□□□ 0.3
SFXN3-201ENST00000224807 LRRN4CLQ8ND94 238 aa16.92■□□□□ 0.3
SFXN3-201ENST00000224807 NGDNQ8NEJ9 315 aaKnown RBP16.92■□□□□ 0.3
SFXN3-201ENST00000224807 RICTORQ6R327 1708 aa16.92■□□□□ 0.3
SFXN3-201ENST00000224807 CWF19L2Q2TBE0 894 aaKnown RBP16.92■□□□□ 0.3
SFXN3-201ENST00000224807 CREB3L3Q68CJ9 461 aa16.92■□□□□ 0.3
SFXN3-201ENST00000224807 LEO1Q8WVC0 666 aaPredicted RBP16.92■□□□□ 0.3
SFXN3-201ENST00000224807 CHPF2Q9P2E5 772 aa16.92■□□□□ 0.3
SFXN3-201ENST00000224807 KCNQ3O43525 872 aa16.91■□□□□ 0.3
SFXN3-201ENST00000224807 TPM3P06753 285 aa16.91■□□□□ 0.3
SFXN3-201ENST00000224807 ZRSR1Q15695 479 aaKnown RBP16.91■□□□□ 0.3
SFXN3-201ENST00000224807 CHST3Q7LGC8 479 aa16.91■□□□□ 0.3
SFXN3-201ENST00000224807 TMEM87AQ8NBN3 555 aa16.91■□□□□ 0.3
SFXN3-201ENST00000224807 BRF1Q92994 677 aa16.91■□□□□ 0.3
SFXN3-201ENST00000224807 EPC1Q9H2F5 836 aa16.91■□□□□ 0.3
SFXN3-201ENST00000224807 CCDC129Q6ZRS4 1044 aa16.91■□□□□ 0.3
SFXN3-201ENST00000224807 CERS3Q8IU89 383 aa16.91■□□□□ 0.3
SFXN3-201ENST00000224807 KRT222Q8N1A0 295 aa16.91■□□□□ 0.3
SFXN3-201ENST00000224807 KIF18AQ8NI77 898 aa16.91■□□□□ 0.3
SFXN3-201ENST00000224807 RUFY2Q8WXA3 655 aa16.91■□□□□ 0.3
SFXN3-201ENST00000224807 EYA1Q99502 592 aa16.91■□□□□ 0.3
SFXN3-201ENST00000224807 SYT10Q6XYQ8 523 aa16.9■□□□□ 0.3
SFXN3-201ENST00000224807 C3P01024 1663 aa16.9■□□□□ 0.3
SFXN3-201ENST00000224807 ACEP12821 1306 aa16.9■□□□□ 0.3
SFXN3-201ENST00000224807 CTIFO43310 598 aaKnown RBP16.9■□□□□ 0.3
SFXN3-201ENST00000224807 AOPEPQ8N6M6 819 aa16.9■□□□□ 0.3
SFXN3-201ENST00000224807 PGBD1Q96JS3 809 aa16.9■□□□□ 0.3
SFXN3-201ENST00000224807 ME1P48163 572 aa16.9■□□□□ 0.3
SFXN3-201ENST00000224807 GOLGA8FQ08AF8 430 aa16.9■□□□□ 0.3
SFXN3-201ENST00000224807 GOLGA8DPQ0D2H9 430 aa16.9■□□□□ 0.3
SFXN3-201ENST00000224807 GNL2Q13823 731 aaKnown RBP16.9■□□□□ 0.3
SFXN3-201ENST00000224807 FEZ1Q99689 392 aa16.9■□□□□ 0.3
SFXN3-201ENST00000224807 SDF4Q9BRK5 362 aa16.9■□□□□ 0.3
SFXN3-201ENST00000224807 TLR7Q9NYK1 1049 aaKnown RBP16.9■□□□□ 0.3
SFXN3-201ENST00000224807 SKIDA1Q1XH10 827 aa16.89■□□□□ 0.29
SFXN3-201ENST00000224807 SLFNL1Q499Z3 407 aa16.89■□□□□ 0.29
SFXN3-201ENST00000224807 IL17RAQ96F46 866 aa16.89■□□□□ 0.29
SFXN3-201ENST00000224807 DNAJC2Q99543 621 aaKnown RBP16.89■□□□□ 0.29
SFXN3-201ENST00000224807 STAP2Q9UGK3 403 aa16.89■□□□□ 0.29
SFXN3-201ENST00000224807 DDX41Q9UJV9 622 aaKnown RBP16.89■□□□□ 0.29
SFXN3-201ENST00000224807 SLC26A8Q96RN1 970 aa16.89■□□□□ 0.29
SFXN3-201ENST00000224807 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.89■□□□□ 0.29
SFXN3-201ENST00000224807 SSH2Q76I76 1423 aa16.89■□□□□ 0.29
SFXN3-201ENST00000224807 A0A0D9SFI3 127 aa16.88■□□□□ 0.29
SFXN3-201ENST00000224807 SLFN14P0C7P3 912 aa16.88■□□□□ 0.29
SFXN3-201ENST00000224807 GLRX3O76003 335 aaKnown RBP16.88■□□□□ 0.29
SFXN3-201ENST00000224807 TEFQ10587 303 aa16.88■□□□□ 0.29
SFXN3-201ENST00000224807 TMEM51Q9NW97 253 aa16.88■□□□□ 0.29
SFXN3-201ENST00000224807 A2ML1A8K2U0 1454 aa16.88■□□□□ 0.29
SFXN3-201ENST00000224807 NLRP6P59044 892 aa16.88■□□□□ 0.29
SFXN3-201ENST00000224807 OTUD7BQ6GQQ9 843 aa16.88■□□□□ 0.29
SFXN3-201ENST00000224807 LRRC8AQ8IWT6 810 aa16.88■□□□□ 0.29
SFXN3-201ENST00000224807 SEC62Q99442 399 aaKnown RBP16.88■□□□□ 0.29
SFXN3-201ENST00000224807 PIP4K2AP48426 406 aaPredicted RBP16.87■□□□□ 0.29
SFXN3-201ENST00000224807 VPS53Q5VIR6 699 aa16.87■□□□□ 0.29
SFXN3-201ENST00000224807 CCAR1Q8IX12 1150 aaKnown RBP16.87■□□□□ 0.29
SFXN3-201ENST00000224807 AKAP12Q02952 1782 aa16.87■□□□□ 0.29
SFXN3-201ENST00000224807 PRR36Q9H6K5 1346 aa16.87■□□□□ 0.29
SFXN3-201ENST00000224807 PDE4CQ08493 712 aa16.87■□□□□ 0.29
SFXN3-201ENST00000224807 RBM33Q96EV2 1170 aaKnown RBP16.87■□□□□ 0.29
SFXN3-201ENST00000224807 ZSWIM4Q9H7M6 989 aa16.87■□□□□ 0.29
SFXN3-201ENST00000224807 NCOA5Q9HCD5 579 aaKnown RBP16.87■□□□□ 0.29
SFXN3-201ENST00000224807 METP08581 1390 aa16.87■□□□□ 0.29
SFXN3-201ENST00000224807 TTC21BQ7Z4L5 1316 aa16.87■□□□□ 0.29
SFXN3-201ENST00000224807 TERF2Q15554 542 aa16.86■□□□□ 0.29
SFXN3-201ENST00000224807 TMC6Q7Z403 805 aa16.86■□□□□ 0.29
SFXN3-201ENST00000224807 NEK11Q8NG66 645 aa16.86■□□□□ 0.29
SFXN3-201ENST00000224807 SLC27A2O14975 620 aa16.86■□□□□ 0.29
SFXN3-201ENST00000224807 ZNF589Q86UQ0 364 aaPredicted RBP16.86■□□□□ 0.29
SFXN3-201ENST00000224807 IL17REQ8NFR9 667 aa16.86■□□□□ 0.29
SFXN3-201ENST00000224807 SCAND2PQ9GZW5 306 aaPredicted RBP16.86■□□□□ 0.29
SFXN3-201ENST00000224807 ECHDC1Q9NTX5 307 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms