RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 MAP3K11Q16584 847 aa21.44■■□□□ 1.02
CLIP2-201ENST00000223398 TSPY3P0CV98 308 aa21.44■■□□□ 1.02
CLIP2-201ENST00000223398 TSPY8P0CW00 308 aa21.44■■□□□ 1.02
CLIP2-201ENST00000223398 SLC26A6Q9BXS9 759 aa21.44■■□□□ 1.02
CLIP2-201ENST00000223398 PANK2Q9BZ23 570 aa21.44■■□□□ 1.02
CLIP2-201ENST00000223398 NPATQ14207 1427 aa21.44■■□□□ 1.02
CLIP2-201ENST00000223398 ABCC1P33527 1531 aa21.44■■□□□ 1.02
CLIP2-201ENST00000223398 NEBLO76041 1014 aa21.44■■□□□ 1.02
CLIP2-201ENST00000223398 TBC1D9Q6ZT07 1266 aa21.44■■□□□ 1.02
CLIP2-201ENST00000223398 NCOA7Q8NI08 942 aa21.44■■□□□ 1.02
CLIP2-201ENST00000223398 NYXQ9GZU5 481 aa21.44■■□□□ 1.02
CLIP2-201ENST00000223398 ZC3H12CQ9C0D7 883 aaKnown RBP21.43■■□□□ 1.02
CLIP2-201ENST00000223398 IRS4O14654 1257 aaPredicted RBP21.43■■□□□ 1.02
CLIP2-201ENST00000223398 ENOX2Q16206 610 aaKnown RBP21.43■■□□□ 1.02
CLIP2-201ENST00000223398 NAA16Q6N069 864 aaPredicted RBP21.43■■□□□ 1.02
CLIP2-201ENST00000223398 DCAF5Q96JK2 942 aa21.43■■□□□ 1.02
CLIP2-201ENST00000223398 SYCE3A1L190 88 aa21.43■■□□□ 1.02
CLIP2-201ENST00000223398 METAP2P50579 478 aaKnown RBP eCLIP21.43■■□□□ 1.02
CLIP2-201ENST00000223398 NEK1Q96PY6 1258 aa21.43■■□□□ 1.02
CLIP2-201ENST00000223398 LRRC2Q9BYS8 371 aa21.42■■□□□ 1.02
CLIP2-201ENST00000223398 ZNF804AQ7Z570 1209 aa21.42■■□□□ 1.02
CLIP2-201ENST00000223398 SMTNL1A8MU46 457 aa21.42■■□□□ 1.02
CLIP2-201ENST00000223398 NEFHP12036 1026 aa21.42■■□□□ 1.02
CLIP2-201ENST00000223398 KIAA0556O60303 1618 aa21.42■■□□□ 1.02
CLIP2-201ENST00000223398 IGHDP01880 384 aa21.42■■□□□ 1.02
CLIP2-201ENST00000223398 HMGN5P82970 282 aaKnown RBP21.42■■□□□ 1.02
CLIP2-201ENST00000223398 BAG4O95429 457 aaKnown RBP21.42■■□□□ 1.02
CLIP2-201ENST00000223398 CIZ1Q9ULV3 898 aaPredicted RBP21.41■■□□□ 1.02
CLIP2-201ENST00000223398 PCDH11XQ9BZA7 1347 aa21.41■■□□□ 1.02
CLIP2-201ENST00000223398 PCDH11YQ9BZA8 1340 aa21.41■■□□□ 1.02
CLIP2-201ENST00000223398 TFIP11Q9UBB9 837 aaKnown RBP21.41■■□□□ 1.02
CLIP2-201ENST00000223398 PRAG1Q86YV5 1406 aa21.41■■□□□ 1.02
CLIP2-201ENST00000223398 FAM98CQ17RN3 349 aaKnown RBP21.41■■□□□ 1.02
CLIP2-201ENST00000223398 SLC9C2Q5TAH2 1124 aa21.41■■□□□ 1.02
CLIP2-201ENST00000223398 MAP3K19Q56UN5 1328 aa21.41■■□□□ 1.02
CLIP2-201ENST00000223398 PHACTR3Q96KR7 559 aa21.41■■□□□ 1.02
CLIP2-201ENST00000223398 TBX22Q9Y458 520 aa21.41■■□□□ 1.02
CLIP2-201ENST00000223398 RALGAPBQ86X10 1494 aa21.41■■□□□ 1.02
CLIP2-201ENST00000223398 ASXL1Q8IXJ9 1541 aa21.41■■□□□ 1.02
CLIP2-201ENST00000223398 MCM4P33991 863 aa21.4■■□□□ 1.02
CLIP2-201ENST00000223398 JDP2Q8WYK2 163 aa21.4■■□□□ 1.02
CLIP2-201ENST00000223398 PHAXQ9H814 394 aaKnown RBP21.4■■□□□ 1.02
CLIP2-201ENST00000223398 ORC3Q9UBD5 711 aaPredicted RBP21.4■■□□□ 1.02
CLIP2-201ENST00000223398 UHRF1BP1Q6BDS2 1440 aa21.4■■□□□ 1.02
CLIP2-201ENST00000223398 TRAPPC3LQ5T215 181 aa21.4■■□□□ 1.02
CLIP2-201ENST00000223398 TCEANC2Q96MN5 208 aa21.4■■□□□ 1.02
CLIP2-201ENST00000223398 TSG101Q99816 390 aa21.4■■□□□ 1.02
CLIP2-201ENST00000223398 TTC22Q5TAA0 569 aa21.4■■□□□ 1.02
CLIP2-201ENST00000223398 IDEP14735 1019 aa21.39■■□□□ 1.02
CLIP2-201ENST00000223398 GJB2P29033 226 aa21.39■■□□□ 1.02
CLIP2-201ENST00000223398 ERCC4Q92889 916 aaPredicted RBP21.39■■□□□ 1.02
CLIP2-201ENST00000223398 CCNL1Q9UK58 526 aaPredicted RBP21.39■■□□□ 1.02
CLIP2-201ENST00000223398 ALDH1L1O75891 902 aa21.39■■□□□ 1.02
CLIP2-201ENST00000223398 DESP17661 470 aa21.39■■□□□ 1.02
CLIP2-201ENST00000223398 TRIM21P19474 475 aaKnown RBP21.39■■□□□ 1.02
CLIP2-201ENST00000223398 TSPYL6Q8N831 410 aa21.39■■□□□ 1.02
CLIP2-201ENST00000223398 CCDC12Q8WUD4 166 aaPredicted RBP21.39■■□□□ 1.02
CLIP2-201ENST00000223398 IP6K1Q92551 441 aa21.39■■□□□ 1.02
CLIP2-201ENST00000223398 RNMTO43148 476 aaKnown RBP21.39■■□□□ 1.01
CLIP2-201ENST00000223398 IL15P40933 162 aaPredicted RBP21.39■■□□□ 1.01
CLIP2-201ENST00000223398 MAP3K5Q99683 1374 aa21.39■■□□□ 1.01
CLIP2-201ENST00000223398 KIAA1328Q86T90 577 aa21.39■■□□□ 1.01
CLIP2-201ENST00000223398 MRPL50Q8N5N7 158 aaKnown RBP21.39■■□□□ 1.01
CLIP2-201ENST00000223398 TMEM87AQ8NBN3 555 aa21.39■■□□□ 1.01
CLIP2-201ENST00000223398 ADAMTS12P58397 1594 aa21.39■■□□□ 1.01
CLIP2-201ENST00000223398 WTAPQ15007 396 aa21.38■■□□□ 1.01
CLIP2-201ENST00000223398 ZGPATQ8N5A5 531 aaKnown RBP21.38■■□□□ 1.01
CLIP2-201ENST00000223398 SCAND2PQ9GZW5 306 aaPredicted RBP21.38■■□□□ 1.01
CLIP2-201ENST00000223398 A0A1W2PP64 1363 aa21.38■■□□□ 1.01
CLIP2-201ENST00000223398 PDIA4P13667 645 aaKnown RBP21.38■■□□□ 1.01
CLIP2-201ENST00000223398 TXLNBQ8N3L3 684 aa21.38■■□□□ 1.01
CLIP2-201ENST00000223398 SPDYE4A6NLX3 237 aa21.37■■□□□ 1.01
CLIP2-201ENST00000223398 ERLIN2O94905 339 aa21.37■■□□□ 1.01
CLIP2-201ENST00000223398 MIGA1Q8NAN2 632 aa21.37■■□□□ 1.01
CLIP2-201ENST00000223398 CNNM3Q8NE01 707 aa21.37■■□□□ 1.01
CLIP2-201ENST00000223398 GDPD2Q9HCC8 539 aa21.37■■□□□ 1.01
CLIP2-201ENST00000223398 EPB41L2O43491 1005 aaKnown RBP21.37■■□□□ 1.01
CLIP2-201ENST00000223398 ABCC2Q92887 1545 aa21.37■■□□□ 1.01
CLIP2-201ENST00000223398 KLF18A0A0U1RQI7 1052 aa21.37■■□□□ 1.01
CLIP2-201ENST00000223398 BRF1Q92994 677 aa21.37■■□□□ 1.01
CLIP2-201ENST00000223398 YTHDC2Q9H6S0 1430 aaKnown RBP21.36■■□□□ 1.01
CLIP2-201ENST00000223398 AXDND1Q5T1B0 1012 aaPredicted RBP21.36■■□□□ 1.01
CLIP2-201ENST00000223398 GRPEL1Q9HAV7 217 aa21.36■■□□□ 1.01
CLIP2-201ENST00000223398 POTEJP0CG39 1038 aa21.36■■□□□ 1.01
CLIP2-201ENST00000223398 CKAP2LQ8IYA6 745 aa21.36■■□□□ 1.01
CLIP2-201ENST00000223398 IFIT1BQ5T764 474 aaKnown RBP21.36■■□□□ 1.01
CLIP2-201ENST00000223398 TRPM2O94759 1503 aa21.36■■□□□ 1.01
CLIP2-201ENST00000223398 MCM5P33992 734 aa21.36■■□□□ 1.01
CLIP2-201ENST00000223398 SSFA2P28290 1259 aa21.35■■□□□ 1.01
CLIP2-201ENST00000223398 CARD14Q9BXL6 1004 aa21.35■■□□□ 1.01
CLIP2-201ENST00000223398 TCP11L1Q9NUJ3 509 aa21.35■■□□□ 1.01
CLIP2-201ENST00000223398 ANKRD62A6NC57 917 aa21.35■■□□□ 1.01
CLIP2-201ENST00000223398 CACNA2D4Q7Z3S7 1137 aa21.35■■□□□ 1.01
CLIP2-201ENST00000223398 ZNF397Q8NF99 534 aaPredicted RBP21.35■■□□□ 1.01
CLIP2-201ENST00000223398 LINS1Q8NG48 757 aa21.35■■□□□ 1.01
CLIP2-201ENST00000223398 PLS1Q14651 629 aa21.35■■□□□ 1.01
CLIP2-201ENST00000223398 FSIP1Q8NA03 581 aa21.35■■□□□ 1.01
CLIP2-201ENST00000223398 BIN1O00499 593 aa21.35■■□□□ 1.01
CLIP2-201ENST00000223398 FKBP15Q5T1M5 1219 aa21.35■■□□□ 1.01
CLIP2-201ENST00000223398 CALML4Q96GE6 196 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms