RNA–Protein interactions for RNA: ENST00000222305.7

USF2-201, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF2, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-201ENST00000222305 TRIM28Q13263 835 aaKnown RBP28.87■■■□□ 2.21
USF2-201ENST00000222305 CLEC4GQ6UXB4 293 aa28.87■■■□□ 2.21
USF2-201ENST00000222305 NLRP10Q86W26 655 aa28.87■■■□□ 2.21
USF2-201ENST00000222305 UTYO14607 1347 aa28.87■■■□□ 2.21
USF2-201ENST00000222305 LRRFIP2Q9Y608 721 aaKnown RBP28.87■■■□□ 2.21
USF2-201ENST00000222305 COL24A1Q17RW2 1714 aa28.86■■■□□ 2.21
USF2-201ENST00000222305 GNAI2P04899 355 aa28.86■■■□□ 2.21
USF2-201ENST00000222305 SLC15A2Q16348 729 aa28.86■■■□□ 2.21
USF2-201ENST00000222305 STK32BQ9NY57 414 aa28.86■■■□□ 2.21
USF2-201ENST00000222305 NIP7Q9Y221 180 aaKnown RBP eCLIP28.86■■■□□ 2.21
USF2-201ENST00000222305 RTL5Q5HYW3 569 aaPredicted RBP28.85■■■□□ 2.21
USF2-201ENST00000222305 UBE3BQ7Z3V4 1068 aa28.85■■■□□ 2.21
USF2-201ENST00000222305 PNPLA7Q6ZV29 1317 aa28.85■■■□□ 2.21
USF2-201ENST00000222305 RGL2O15211 777 aa28.84■■■□□ 2.21
USF2-201ENST00000222305 TBC1D9BQ66K14 1250 aa28.84■■■□□ 2.21
USF2-201ENST00000222305 COL23A1Q86Y22 540 aaPredicted RBP28.84■■■□□ 2.21
USF2-201ENST00000222305 BICDL1Q6ZP65 573 aa28.83■■■□□ 2.21
USF2-201ENST00000222305 MYH3P11055 1940 aa28.83■■■□□ 2.21
USF2-201ENST00000222305 H7C1W4 665 aa28.82■■■□□ 2.2
USF2-201ENST00000222305 MSH5O43196 834 aa28.82■■■□□ 2.2
USF2-201ENST00000222305 CASP7P55210 303 aa28.82■■■□□ 2.2
USF2-201ENST00000222305 SUCLG2Q96I99 432 aa28.82■■■□□ 2.2
USF2-201ENST00000222305 FAM177BA6PVY3 158 aa28.81■■■□□ 2.2
USF2-201ENST00000222305 GYS1P13807 737 aa28.81■■■□□ 2.2
USF2-201ENST00000222305 SUSD4Q5VX71 490 aa28.81■■■□□ 2.2
USF2-201ENST00000222305 CASZ1Q86V15 1759 aa28.81■■■□□ 2.2
USF2-201ENST00000222305 CEP85Q6P2H3 762 aa28.8■■■□□ 2.2
USF2-201ENST00000222305 FLAD1Q8NFF5 587 aa28.8■■■□□ 2.2
USF2-201ENST00000222305 PARP10Q53GL7 1025 aa28.8■■■□□ 2.2
USF2-201ENST00000222305 SIRT2Q8IXJ6 389 aa28.8■■■□□ 2.2
USF2-201ENST00000222305 FAM89AQ96GI7 184 aa28.8■■■□□ 2.2
USF2-201ENST00000222305 KAZALD1Q96I82 304 aa28.8■■■□□ 2.2
USF2-201ENST00000222305 LAMB2P55268 1798 aa28.79■■■□□ 2.2
USF2-201ENST00000222305 DDX60Q8IY21 1712 aaKnown RBP28.79■■■□□ 2.2
USF2-201ENST00000222305 IGHDP01880 384 aa28.79■■■□□ 2.2
USF2-201ENST00000222305 PCCAP05165 728 aaPredicted RBP28.79■■■□□ 2.2
USF2-201ENST00000222305 ZBTB38Q8NAP3 1195 aaPredicted RBP28.79■■■□□ 2.2
USF2-201ENST00000222305 TRMT112Q9UI30 125 aaKnown RBP28.79■■■□□ 2.2
USF2-201ENST00000222305 SYNE4Q8N205 404 aa28.78■■■□□ 2.2
USF2-201ENST00000222305 ANKRD44Q8N8A2 993 aa28.78■■■□□ 2.2
USF2-201ENST00000222305 BICC1Q9H694 974 aaKnown RBP28.77■■■□□ 2.2
USF2-201ENST00000222305 SETDB2Q96T68 719 aa28.76■■■□□ 2.2
USF2-201ENST00000222305 NTSR2O95665 410 aa28.76■■■□□ 2.19
USF2-201ENST00000222305 EPHA10Q5JZY3 1008 aa28.76■■■□□ 2.19
USF2-201ENST00000222305 PPP1R42Q7Z4L9 355 aa28.76■■■□□ 2.19
USF2-201ENST00000222305 RPAP2Q8IXW5 612 aaPredicted RBP28.76■■■□□ 2.19
USF2-201ENST00000222305 UTP14AQ9BVJ6 771 aaKnown RBP28.76■■■□□ 2.19
USF2-201ENST00000222305 HDAC5Q9UQL6 1122 aa28.76■■■□□ 2.19
USF2-201ENST00000222305 NFIXQ14938 502 aa28.74■■■□□ 2.19
USF2-201ENST00000222305 PDGFDQ9GZP0 370 aaPredicted RBP28.74■■■□□ 2.19
USF2-201ENST00000222305 PNMA6EA0A0J9YXQ4 647 aa28.73■■■□□ 2.19
USF2-201ENST00000222305 HDAC1Q13547 482 aaPredicted RBP28.73■■■□□ 2.19
USF2-201ENST00000222305 RWDD1Q9H446 243 aaPredicted RBP28.73■■■□□ 2.19
USF2-201ENST00000222305 CDHR2Q9BYE9 1310 aa28.73■■■□□ 2.19
USF2-201ENST00000222305 ATP8B2P98198 1209 aa28.72■■■□□ 2.19
USF2-201ENST00000222305 NUTM1Q86Y26 1132 aa28.72■■■□□ 2.19
USF2-201ENST00000222305 KDM2BQ8NHM5 1336 aa28.72■■■□□ 2.19
USF2-201ENST00000222305 SH3TC1Q8TE82 1336 aa28.72■■■□□ 2.19
USF2-201ENST00000222305 CARMIL3Q8ND23 1372 aa28.72■■■□□ 2.19
USF2-201ENST00000222305 IRS4O14654 1257 aaPredicted RBP28.71■■■□□ 2.19
USF2-201ENST00000222305 FOXO4P98177 505 aa28.7■■■□□ 2.19
USF2-201ENST00000222305 R3HDM1Q15032 1099 aaKnown RBP28.69■■■□□ 2.18
USF2-201ENST00000222305 NBPF5PQ86XG9 351 aaPredicted RBP28.69■■■□□ 2.18
USF2-201ENST00000222305 SRGAP3O43295 1099 aa28.69■■■□□ 2.18
USF2-201ENST00000222305 TM4SF1P30408 202 aa28.69■■■□□ 2.18
USF2-201ENST00000222305 MTX1Q13505 466 aa28.69■■■□□ 2.18
USF2-201ENST00000222305 RABL6Q3YEC7 729 aaPredicted RBP28.68■■■□□ 2.18
USF2-201ENST00000222305 ERFEQ4G0M1 354 aa28.68■■■□□ 2.18
USF2-201ENST00000222305 MSL1Q68DK7 614 aa28.68■■■□□ 2.18
USF2-201ENST00000222305 CENPQQ7L2Z9 268 aaPredicted RBP28.68■■■□□ 2.18
USF2-201ENST00000222305 NYXQ9GZU5 481 aa28.68■■■□□ 2.18
USF2-201ENST00000222305 HMMRO75330 724 aa28.67■■■□□ 2.18
USF2-201ENST00000222305 HCLS1P14317 486 aaPredicted RBP28.67■■■□□ 2.18
USF2-201ENST00000222305 LMBR1LQ6UX01 489 aa28.67■■■□□ 2.18
USF2-201ENST00000222305 NLGN1Q8N2Q7 840 aa28.67■■■□□ 2.18
USF2-201ENST00000222305 PLA2G12BQ9BX93 195 aa28.67■■■□□ 2.18
USF2-201ENST00000222305 DDR1Q08345 913 aa28.66■■■□□ 2.18
USF2-201ENST00000222305 SSH3Q8TE77 659 aa28.66■■■□□ 2.18
USF2-201ENST00000222305 ABCC12Q96J65 1359 aa28.66■■■□□ 2.18
USF2-201ENST00000222305 NRXN2Q9P2S2 1712 aa28.65■■■□□ 2.18
USF2-201ENST00000222305 PSDA5PKW4 1024 aaPredicted RBP28.65■■■□□ 2.18
USF2-201ENST00000222305 GTF2E1P29083 439 aaPredicted RBP28.65■■■□□ 2.18
USF2-201ENST00000222305 CHMP3Q9Y3E7 222 aa28.65■■■□□ 2.18
USF2-201ENST00000222305 TNRC6CQ9HCJ0 1690 aaKnown RBP28.65■■■□□ 2.18
USF2-201ENST00000222305 PDE8AO60658 829 aa28.65■■■□□ 2.18
USF2-201ENST00000222305 POLA2Q14181 598 aa28.65■■■□□ 2.18
USF2-201ENST00000222305 CCDC24Q8N4L8 307 aa28.65■■■□□ 2.18
USF2-201ENST00000222305 POLRMTO00411 1230 aaKnown RBP28.64■■■□□ 2.18
USF2-201ENST00000222305 TPTE2Q6XPS3 522 aa28.64■■■□□ 2.18
USF2-201ENST00000222305 SERPINB2P05120 415 aa28.63■■■□□ 2.17
USF2-201ENST00000222305 CCDC85AQ96PX6 553 aaPredicted RBP28.63■■■□□ 2.17
USF2-201ENST00000222305 NPHP1O15259 732 aa28.62■■■□□ 2.17
USF2-201ENST00000222305 CTSWP56202 376 aa28.62■■■□□ 2.17
USF2-201ENST00000222305 CNBD1Q8NA66 436 aa28.61■■■□□ 2.17
USF2-201ENST00000222305 SPEF2Q9C093 1822 aa28.61■■■□□ 2.17
USF2-201ENST00000222305 TTLL11Q8NHH1 800 aa28.61■■■□□ 2.17
USF2-201ENST00000222305 TAF1P21675 1872 aa28.6■■■□□ 2.17
USF2-201ENST00000222305 CSF1RP07333 972 aa28.6■■■□□ 2.17
USF2-201ENST00000222305 MMP10P09238 476 aa28.6■■■□□ 2.17
USF2-201ENST00000222305 PRR5LQ6MZQ0 368 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms