RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 ADAMTS2O95450 1211 aa21.42■■□□□ 1.02
GCDH-201ENST00000222214 MCM2P49736 904 aa21.42■■□□□ 1.02
GCDH-201ENST00000222214 FOXO4P98177 505 aa21.41■■□□□ 1.02
GCDH-201ENST00000222214 DOT1LQ8TEK3 1739 aa21.41■■□□□ 1.02
GCDH-201ENST00000222214 MAP4K4O95819 1239 aaPredicted RBP21.41■■□□□ 1.02
GCDH-201ENST00000222214 DDB1Q16531 1140 aa21.41■■□□□ 1.02
GCDH-201ENST00000222214 LMBR1LQ6UX01 489 aa21.41■■□□□ 1.02
GCDH-201ENST00000222214 DIAPH3Q9NSV4 1193 aa21.41■■□□□ 1.02
GCDH-201ENST00000222214 SLIT2O94813 1529 aa21.4■■□□□ 1.02
GCDH-201ENST00000222214 SPATA31A5Q5VU36 1347 aa21.39■■□□□ 1.02
GCDH-201ENST00000222214 SPATA31A7Q8IWB4 1347 aa21.39■■□□□ 1.02
GCDH-201ENST00000222214 RAD50Q92878 1312 aa21.39■■□□□ 1.02
GCDH-201ENST00000222214 HSP90AB3PQ58FF7 597 aa21.39■■□□□ 1.02
GCDH-201ENST00000222214 BARGINQ6ZT62 677 aa21.39■■□□□ 1.02
GCDH-201ENST00000222214 KIAA1211Q6ZU35 1233 aa21.39■■□□□ 1.02
GCDH-201ENST00000222214 KLHDC4Q8TBB5 520 aa21.39■■□□□ 1.02
GCDH-201ENST00000222214 MAP3K15Q6ZN16 1313 aa21.39■■□□□ 1.01
GCDH-201ENST00000222214 JARID2Q92833 1246 aaPredicted RBP21.39■■□□□ 1.01
GCDH-201ENST00000222214 CYP19A1P11511 503 aaPredicted RBP21.38■■□□□ 1.01
GCDH-201ENST00000222214 HSPA4P34932 840 aa21.38■■□□□ 1.01
GCDH-201ENST00000222214 DEKP35659 375 aaKnown RBP21.38■■□□□ 1.01
GCDH-201ENST00000222214 CCDC8Q9H0W5 538 aaPredicted RBP21.38■■□□□ 1.01
GCDH-201ENST00000222214 TNNI3KQ59H18 835 aa21.37■■□□□ 1.01
GCDH-201ENST00000222214 FPGT-TNNI3KV9GXZ4 949 aa21.37■■□□□ 1.01
GCDH-201ENST00000222214 GIGYF2Q6Y7W6 1299 aaKnown RBP21.37■■□□□ 1.01
GCDH-201ENST00000222214 GPR108Q9NPR9 543 aa21.37■■□□□ 1.01
GCDH-201ENST00000222214 SYTL4Q96C24 671 aaPredicted RBP21.36■■□□□ 1.01
GCDH-201ENST00000222214 FBXO3Q9UK99 471 aa21.36■■□□□ 1.01
GCDH-201ENST00000222214 PCCAP05165 728 aaPredicted RBP21.36■■□□□ 1.01
GCDH-201ENST00000222214 ATP5JP18859 108 aa21.36■■□□□ 1.01
GCDH-201ENST00000222214 IL15P40933 162 aaPredicted RBP21.36■■□□□ 1.01
GCDH-201ENST00000222214 PRIM1P49642 420 aaKnown RBP21.36■■□□□ 1.01
GCDH-201ENST00000222214 TFCP2Q12800 502 aa21.36■■□□□ 1.01
GCDH-201ENST00000222214 CWC27Q6UX04 472 aaKnown RBP21.36■■□□□ 1.01
GCDH-201ENST00000222214 PLA2G12BQ9BX93 195 aa21.36■■□□□ 1.01
GCDH-201ENST00000222214 CWC22Q9HCG8 908 aaKnown RBP21.36■■□□□ 1.01
GCDH-201ENST00000222214 CHMP3Q9Y3E7 222 aa21.36■■□□□ 1.01
GCDH-201ENST00000222214 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.36■■□□□ 1.01
GCDH-201ENST00000222214 CIAO1O76071 339 aa21.35■■□□□ 1.01
GCDH-201ENST00000222214 LSG1Q9H089 658 aaKnown RBP21.35■■□□□ 1.01
GCDH-201ENST00000222214 ZNF330Q9Y3S2 320 aaPredicted RBP21.35■■□□□ 1.01
GCDH-201ENST00000222214 KAT6BQ8WYB5 2073 aa21.35■■□□□ 1.01
GCDH-201ENST00000222214 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.34■■□□□ 1.01
GCDH-201ENST00000222214 IL6STP40189 918 aaPredicted RBP21.34■■□□□ 1.01
GCDH-201ENST00000222214 NEK4P51957 841 aa21.34■■□□□ 1.01
GCDH-201ENST00000222214 PIP4K2BP78356 416 aa21.34■■□□□ 1.01
GCDH-201ENST00000222214 RAB3GAP1Q15042 981 aa21.34■■□□□ 1.01
GCDH-201ENST00000222214 ZBTB38Q8NAP3 1195 aaPredicted RBP21.34■■□□□ 1.01
GCDH-201ENST00000222214 RFX7Q2KHR2 1363 aa21.34■■□□□ 1.01
GCDH-201ENST00000222214 ANKRD36CQ5JPF3 1778 aa21.34■■□□□ 1.01
GCDH-201ENST00000222214 CICQ96RK0 1608 aaPredicted RBP21.34■■□□□ 1.01
GCDH-201ENST00000222214 NUTM2BA6NNL0 878 aaPredicted RBP21.34■■□□□ 1.01
GCDH-201ENST00000222214 NUTM2EB1AL46 878 aaPredicted RBP21.34■■□□□ 1.01
GCDH-201ENST00000222214 NUTM2AQ8IVF1 878 aaPredicted RBP21.34■■□□□ 1.01
GCDH-201ENST00000222214 SLC4A9Q96Q91 983 aa21.34■■□□□ 1.01
GCDH-201ENST00000222214 IL25Q9H293 177 aa21.34■■□□□ 1.01
GCDH-201ENST00000222214 TLR7Q9NYK1 1049 aaKnown RBP21.34■■□□□ 1.01
GCDH-201ENST00000222214 ERVV-1B6SEH8 477 aa21.33■■□□□ 1.01
GCDH-201ENST00000222214 MCM4P33991 863 aa21.33■■□□□ 1.01
GCDH-201ENST00000222214 TICAM2Q86XR7 235 aa21.33■■□□□ 1.01
GCDH-201ENST00000222214 CDHR2Q9BYE9 1310 aa21.33■■□□□ 1
GCDH-201ENST00000222214 SNRKQ9NRH2 765 aa21.32■■□□□ 1
GCDH-201ENST00000222214 DBNLQ9UJU6 430 aaKnown RBP21.32■■□□□ 1
GCDH-201ENST00000222214 PALD1Q9ULE6 856 aa21.32■■□□□ 1
GCDH-201ENST00000222214 DDX11L8A8MPP1 907 aa21.32■■□□□ 1
GCDH-201ENST00000222214 GBP4Q96PP9 640 aa21.32■■□□□ 1
GCDH-201ENST00000222214 BOLA2Q9H3K6 86 aa21.32■■□□□ 1
GCDH-201ENST00000222214 EYA2O00167 538 aa21.31■■□□□ 1
GCDH-201ENST00000222214 GSE1Q14687 1217 aa21.31■■□□□ 1
GCDH-201ENST00000222214 NUCB2P80303 420 aa21.3■■□□□ 1
GCDH-201ENST00000222214 CCDC57Q2TAC2 916 aa21.3■■□□□ 1
GCDH-201ENST00000222214 ATG9AQ7Z3C6 839 aa21.3■■□□□ 1
GCDH-201ENST00000222214 FSD1Q9BTV5 496 aa21.3■■□□□ 1
GCDH-201ENST00000222214 ZBTB1Q9Y2K1 713 aa21.3■■□□□ 1
GCDH-201ENST00000222214 PTMSP20962 102 aa21.3■■□□□ 1
GCDH-201ENST00000222214 CCDC9Q9Y3X0 531 aaKnown RBP21.3■■□□□ 1
GCDH-201ENST00000222214 MARCH10Q8NA82 808 aaPredicted RBP21.29■■□□□ 1
GCDH-201ENST00000222214 JCADQ9P266 1359 aa21.29■■□□□ 1
GCDH-201ENST00000222214 CSF1RP07333 972 aa21.28■■□□□ 1
GCDH-201ENST00000222214 NLRP10Q86W26 655 aa21.28■■□□□ 1
GCDH-201ENST00000222214 SMARCC1Q92922 1105 aaPredicted RBP21.28■■□□□ 1
GCDH-201ENST00000222214 TNPO1Q92973 898 aaKnown RBP21.28■■□□□ 1
GCDH-201ENST00000222214 ARXQ96QS3 562 aa21.28■■□□□ 1
GCDH-201ENST00000222214 NUP98P52948 1817 aa21.27■■□□□ 1
GCDH-201ENST00000222214 RREB1Q92766 1687 aa21.27■■□□□ 1
GCDH-201ENST00000222214 HAUS7Q99871 368 aa21.27■■□□□ 1
GCDH-201ENST00000222214 FOXD4L1Q9NU39 408 aa21.27■■□□□ 1
GCDH-201ENST00000222214 CCDC171Q6TFL3 1326 aa21.27■■□□□ 1
GCDH-201ENST00000222214 UBAP1LF5GYI3 381 aa21.27■□□□□ 0.99
GCDH-201ENST00000222214 CLEC17AQ6ZS10 378 aa21.27■□□□□ 0.99
GCDH-201ENST00000222214 DZIP3Q86Y13 1208 aaKnown RBP21.27■□□□□ 0.99
GCDH-201ENST00000222214 KCNB2Q92953 911 aa21.27■□□□□ 0.99
GCDH-201ENST00000222214 INTS4Q96HW7 963 aaKnown RBP21.27■□□□□ 0.99
GCDH-201ENST00000222214 DBNDD2Q9BQY9 259 aa21.27■□□□□ 0.99
GCDH-201ENST00000222214 SNX14Q9Y5W7 946 aa21.27■□□□□ 0.99
GCDH-201ENST00000222214 ZNF609O15014 1411 aa21.26■□□□□ 0.99
GCDH-201ENST00000222214 HLFQ16534 295 aa21.26■□□□□ 0.99
GCDH-201ENST00000222214 TMX3Q96JJ7 454 aa21.26■□□□□ 0.99
GCDH-201ENST00000222214 CCDC87Q9NVE4 849 aa21.26■□□□□ 0.99
GCDH-201ENST00000222214 AKAP2Q9Y2D5 859 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms