RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 PPP1R42Q7Z4L9 355 aa17.03■□□□□ 0.32
UBR5-201ENST00000220959 CEP112Q8N8E3 955 aa17.03■□□□□ 0.32
UBR5-201ENST00000220959 PLEKHH2Q8IVE3 1493 aa17.03■□□□□ 0.32
UBR5-201ENST00000220959 ATAD2BQ9ULI0 1458 aa17.03■□□□□ 0.32
UBR5-201ENST00000220959 NDC80O14777 642 aa17.03■□□□□ 0.32
UBR5-201ENST00000220959 STX1AQ16623 288 aa17.03■□□□□ 0.32
UBR5-201ENST00000220959 DDX19AQ9NUU7 478 aaKnown RBP17.03■□□□□ 0.32
UBR5-201ENST00000220959 HSF2BPO75031 334 aa17.02■□□□□ 0.32
UBR5-201ENST00000220959 IQCGQ9H095 443 aaKnown RBP17.02■□□□□ 0.32
UBR5-201ENST00000220959 BIN1O00499 593 aa17.02■□□□□ 0.32
UBR5-201ENST00000220959 CBX1P83916 185 aa17.02■□□□□ 0.32
UBR5-201ENST00000220959 ISM2Q6H9L7 571 aa17.02■□□□□ 0.32
UBR5-201ENST00000220959 TRAF1Q13077 416 aa17.02■□□□□ 0.32
UBR5-201ENST00000220959 USHBP1Q8N6Y0 703 aa17.02■□□□□ 0.32
UBR5-201ENST00000220959 NSD3Q9BZ95 1437 aa17.02■□□□□ 0.32
UBR5-201ENST00000220959 METAP2P50579 478 aaKnown RBP eCLIP17.02■□□□□ 0.32
UBR5-201ENST00000220959 NBPF7P0C2Y1 421 aaPredicted RBP17.02■□□□□ 0.31
UBR5-201ENST00000220959 GSTO1P78417 241 aa17.02■□□□□ 0.31
UBR5-201ENST00000220959 TEX13AQ9BXU3 409 aaPredicted RBP17.02■□□□□ 0.31
UBR5-201ENST00000220959 RAD54L2Q9Y4B4 1467 aa17.01■□□□□ 0.31
UBR5-201ENST00000220959 GOLIM4O00461 696 aa17.01■□□□□ 0.31
UBR5-201ENST00000220959 NCBP1Q09161 790 aaKnown RBP17.01■□□□□ 0.31
UBR5-201ENST00000220959 ERMNQ8TAM6 284 aa17.01■□□□□ 0.31
UBR5-201ENST00000220959 DNAAF4Q8WXU2 420 aa17.01■□□□□ 0.31
UBR5-201ENST00000220959 SLC26A6Q9BXS9 759 aa17.01■□□□□ 0.31
UBR5-201ENST00000220959 SELENOOQ9BVL4 669 aa17.01■□□□□ 0.31
UBR5-201ENST00000220959 PAIP2Q9BPZ3 127 aaKnown RBP17.01■□□□□ 0.31
UBR5-201ENST00000220959 CRNKL1Q9BZJ0 848 aaKnown RBP17.01■□□□□ 0.31
UBR5-201ENST00000220959 KIF21BO75037 1637 aa17.01■□□□□ 0.31
UBR5-201ENST00000220959 MXRA7P84157 204 aa17.01■□□□□ 0.31
UBR5-201ENST00000220959 RMND1Q9NWS8 449 aa17■□□□□ 0.31
UBR5-201ENST00000220959 CWC25Q9NXE8 425 aaPredicted RBP17■□□□□ 0.31
UBR5-201ENST00000220959 TRIM47Q96LD4 638 aa17■□□□□ 0.31
UBR5-201ENST00000220959 PANK2Q9BZ23 570 aa17■□□□□ 0.31
UBR5-201ENST00000220959 DBF4Q9UBU7 674 aaPredicted RBP17■□□□□ 0.31
UBR5-201ENST00000220959 SLU7O95391 586 aaKnown RBP17■□□□□ 0.31
UBR5-201ENST00000220959 KRT13P13646 458 aa17■□□□□ 0.31
UBR5-201ENST00000220959 GRM1Q13255 1194 aa17■□□□□ 0.31
UBR5-201ENST00000220959 TFIP11Q9UBB9 837 aaKnown RBP17■□□□□ 0.31
UBR5-201ENST00000220959 RRP9O43818 475 aaKnown RBP17■□□□□ 0.31
UBR5-201ENST00000220959 C9orf84Q5VXU9 1444 aa17■□□□□ 0.31
UBR5-201ENST00000220959 ALDH1L2Q3SY69 923 aa17■□□□□ 0.31
UBR5-201ENST00000220959 IL27Q8NEV9 243 aa17■□□□□ 0.31
UBR5-201ENST00000220959 KIAA1107Q9UPP5 1409 aa17■□□□□ 0.31
UBR5-201ENST00000220959 CALCOCO1Q9P1Z2 691 aa17■□□□□ 0.31
UBR5-201ENST00000220959 MICU3Q86XE3 530 aa16.99■□□□□ 0.31
UBR5-201ENST00000220959 APBB1IPQ7Z5R6 666 aaPredicted RBP16.99■□□□□ 0.31
UBR5-201ENST00000220959 EHBP1Q8NDI1 1231 aa16.99■□□□□ 0.31
UBR5-201ENST00000220959 NCOA7Q8NI08 942 aa16.99■□□□□ 0.31
UBR5-201ENST00000220959 THUMPD2Q9BTF0 503 aaKnown RBP16.99■□□□□ 0.31
UBR5-201ENST00000220959 STX8Q9UNK0 236 aa16.99■□□□□ 0.31
UBR5-201ENST00000220959 CLEC11AQ9Y240 323 aa16.99■□□□□ 0.31
UBR5-201ENST00000220959 TSPY3P0CV98 308 aa16.99■□□□□ 0.31
UBR5-201ENST00000220959 TSPY8P0CW00 308 aa16.99■□□□□ 0.31
UBR5-201ENST00000220959 CCDC102BQ68D86 513 aa16.99■□□□□ 0.31
UBR5-201ENST00000220959 ZBTB3Q9H5J0 574 aa16.99■□□□□ 0.31
UBR5-201ENST00000220959 HDAC9Q9UKV0 1011 aa16.99■□□□□ 0.31
UBR5-201ENST00000220959 SNW1Q13573 536 aaKnown RBP16.99■□□□□ 0.31
UBR5-201ENST00000220959 ORC3Q9UBD5 711 aaPredicted RBP16.99■□□□□ 0.31
UBR5-201ENST00000220959 MAPK8IP2Q13387 824 aaPredicted RBP16.98■□□□□ 0.31
UBR5-201ENST00000220959 C16orf45Q96MC5 204 aaPredicted RBP16.98■□□□□ 0.31
UBR5-201ENST00000220959 TIGD1Q96MW7 591 aa16.98■□□□□ 0.31
UBR5-201ENST00000220959 GJB2P29033 226 aa16.98■□□□□ 0.31
UBR5-201ENST00000220959 LARP6Q9BRS8 491 aaKnown RBP16.98■□□□□ 0.31
UBR5-201ENST00000220959 DAAM2Q86T65 1068 aa16.98■□□□□ 0.31
UBR5-201ENST00000220959 F6X3S4 739 aa16.98■□□□□ 0.31
UBR5-201ENST00000220959 PPP4R3BQ5MIZ7 849 aa16.98■□□□□ 0.31
UBR5-201ENST00000220959 SMARCA4P51532 1647 aa16.98■□□□□ 0.31
UBR5-201ENST00000220959 IMPG2Q9BZV3 1241 aa16.98■□□□□ 0.31
UBR5-201ENST00000220959 MAP3K2Q9Y2U5 619 aa16.98■□□□□ 0.31
UBR5-201ENST00000220959 PSMC4P43686 418 aa16.97■□□□□ 0.31
UBR5-201ENST00000220959 SLFN5Q08AF3 891 aa16.97■□□□□ 0.31
UBR5-201ENST00000220959 CCDC63Q8NA47 563 aa16.97■□□□□ 0.31
UBR5-201ENST00000220959 MAP7D1Q3KQU3 841 aa16.97■□□□□ 0.31
UBR5-201ENST00000220959 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.97■□□□□ 0.31
UBR5-201ENST00000220959 V9GYY5 206 aaPredicted RBP16.97■□□□□ 0.31
UBR5-201ENST00000220959 HAND2P61296 217 aa16.97■□□□□ 0.31
UBR5-201ENST00000220959 NEK1Q96PY6 1258 aa16.97■□□□□ 0.31
UBR5-201ENST00000220959 ODF2LQ9ULJ1 636 aa16.97■□□□□ 0.31
UBR5-201ENST00000220959 N4BP3O15049 544 aa16.97■□□□□ 0.31
UBR5-201ENST00000220959 STAT6P42226 847 aa16.97■□□□□ 0.31
UBR5-201ENST00000220959 IFIT1BQ5T764 474 aaKnown RBP16.97■□□□□ 0.31
UBR5-201ENST00000220959 SPAG5Q96R06 1193 aa16.97■□□□□ 0.31
UBR5-201ENST00000220959 KIF4AO95239 1232 aa16.97■□□□□ 0.31
UBR5-201ENST00000220959 POLA1P09884 1462 aaPredicted RBP16.97■□□□□ 0.31
UBR5-201ENST00000220959 AKR1B10O60218 316 aa16.96■□□□□ 0.31
UBR5-201ENST00000220959 RASAL2Q9UJF2 1139 aa16.96■□□□□ 0.31
UBR5-201ENST00000220959 CCDC6Q16204 474 aa16.96■□□□□ 0.31
UBR5-201ENST00000220959 ZGPATQ8N5A5 531 aaKnown RBP16.96■□□□□ 0.31
UBR5-201ENST00000220959 CYLC1P35663 651 aaPredicted RBP16.96■□□□□ 0.31
UBR5-201ENST00000220959 PRPHP41219 470 aa16.96■□□□□ 0.31
UBR5-201ENST00000220959 AQRO60306 1485 aaKnown RBP eCLIP16.96■□□□□ 0.314e-7■■■■□ 20.1
UBR5-201ENST00000220959 WAPLQ7Z5K2 1190 aa16.96■□□□□ 0.31
UBR5-201ENST00000220959 C16orf71Q8IYS4 520 aaPredicted RBP16.96■□□□□ 0.31
UBR5-201ENST00000220959 USP25Q9UHP3 1055 aa16.96■□□□□ 0.31
UBR5-201ENST00000220959 OGFOD1Q8N543 542 aa16.96■□□□□ 0.31
UBR5-201ENST00000220959 TCHPQ9BT92 498 aa16.96■□□□□ 0.31
UBR5-201ENST00000220959 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.96■□□□□ 0.313e-7■■□□□ 13.9
UBR5-201ENST00000220959 PTPRCP08575 1304 aa16.96■□□□□ 0.3
UBR5-201ENST00000220959 GSTA5Q7RTV2 222 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 1361.2 ms