RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 PATL2C9JE40 543 aaKnown RBP5.08□□□□□ -1.6
CHD9-201ENST00000219084 BRPF1P55201 1214 aaPredicted RBP5.08□□□□□ -1.6
CHD9-201ENST00000219084 ZKSCAN5Q9Y2L8 839 aa5.08□□□□□ -1.6
CHD9-201ENST00000219084 SLC12A7Q9Y666 1083 aa5.08□□□□□ -1.6
CHD9-201ENST00000219084 OPA1O60313 960 aa5.08□□□□□ -1.6
CHD9-201ENST00000219084 CATIPQ7Z7H3 387 aa5.08□□□□□ -1.6
CHD9-201ENST00000219084 STAMBPO95630 424 aa5.08□□□□□ -1.6
CHD9-201ENST00000219084 ZFYVE27Q5T4F4 411 aa5.08□□□□□ -1.6
CHD9-201ENST00000219084 TXNDC2Q86VQ3 553 aa5.08□□□□□ -1.6
CHD9-201ENST00000219084 NUDT16Q96DE0 195 aaKnown RBP5.08□□□□□ -1.6
CHD9-201ENST00000219084 RBM10P98175 930 aaKnown RBP5.08□□□□□ -1.6
CHD9-201ENST00000219084 BRAPQ7Z569 592 aa5.08□□□□□ -1.6
CHD9-201ENST00000219084 DYDC1Q8WWB3 177 aa5.08□□□□□ -1.6
CHD9-201ENST00000219084 TANGO6Q9C0B7 1094 aa5.08□□□□□ -1.6
CHD9-201ENST00000219084 RASAL2Q9UJF2 1139 aa5.08□□□□□ -1.6
CHD9-201ENST00000219084 LRRFIP2Q9Y608 721 aaKnown RBP5.08□□□□□ -1.6
CHD9-201ENST00000219084 SLC5A1P13866 664 aa5.08□□□□□ -1.6
CHD9-201ENST00000219084 NUP88Q99567 741 aaPredicted RBP5.08□□□□□ -1.6
CHD9-201ENST00000219084 KRT23Q9C075 422 aa5.08□□□□□ -1.6
CHD9-201ENST00000219084 PZPP20742 1482 aa5.08□□□□□ -1.6
CHD9-201ENST00000219084 FOSBP53539 338 aa5.08□□□□□ -1.6
CHD9-201ENST00000219084 USP37Q86T82 979 aa5.08□□□□□ -1.6
CHD9-201ENST00000219084 CNNM3Q8NE01 707 aa5.08□□□□□ -1.6
CHD9-201ENST00000219084 ANKRD18BA2A2Z9 1011 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 CTAGE9A4FU28 777 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 MAP2K1Q02750 393 aaPredicted RBP5.07□□□□□ -1.6
CHD9-201ENST00000219084 TRIM14Q14142 442 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 SPATA24Q86W54 205 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 SREK1Q8WXA9 508 aaKnown RBP5.07□□□□□ -1.6
CHD9-201ENST00000219084 TTC14Q96N46 770 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 UNC13BO14795 1591 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 NDC80O14777 642 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 ZNF165P49910 485 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 SPTY2D1Q68D10 685 aaPredicted RBP5.07□□□□□ -1.6
CHD9-201ENST00000219084 CCDC102BQ68D86 513 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 NUTM2FA1L443 756 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 MSH5O43196 834 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 NEFHP12036 1026 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 CEBPZQ03701 1054 aaKnown RBP5.07□□□□□ -1.6
CHD9-201ENST00000219084 CAVIN4Q5BKX8 364 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 ANKLE2Q86XL3 938 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 RTL1A6NKG5 1358 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 ITSN1Q15811 1721 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 GNAT2P19087 354 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 DHX37Q8IY37 1157 aaKnown RBP5.07□□□□□ -1.6
CHD9-201ENST00000219084 SMAP1Q8IYB5 467 aaPredicted RBP5.07□□□□□ -1.6
CHD9-201ENST00000219084 NAPBQ9H115 298 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 RTL9Q8NET4 1388 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 WASLO00401 505 aaPredicted RBP5.07□□□□□ -1.6
CHD9-201ENST00000219084 HSF2BPO75031 334 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 IFIT1P09914 478 aaKnown RBP5.07□□□□□ -1.6
CHD9-201ENST00000219084 CCDC175P0C221 793 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 KIF4BQ2VIQ3 1234 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 CERS3Q8IU89 383 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 CALML4Q96GE6 196 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 FERMT1Q9BQL6 677 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 IMPACTQ9P2X3 320 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 STK24Q9Y6E0 443 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 ALDH1L1O75891 902 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 GJB2P29033 226 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 CACNA2D4Q7Z3S7 1137 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 SMARCC1Q92922 1105 aaPredicted RBP5.07□□□□□ -1.6
CHD9-201ENST00000219084 LLPHQ9BRT6 129 aaKnown RBP5.07□□□□□ -1.6
CHD9-201ENST00000219084 BCCIPQ9P287 314 aaKnown RBP eCLIP5.07□□□□□ -1.6
CHD9-201ENST00000219084 ATP10BO94823 1461 aa5.07□□□□□ -1.6
CHD9-201ENST00000219084 ZNF213O14771 459 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 KRT83P78385 493 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 ZGPATQ8N5A5 531 aaKnown RBP5.06□□□□□ -1.6
CHD9-201ENST00000219084 NCOA7Q8NI08 942 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 PPM1EQ8WY54 764 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 GOLGA1Q92805 767 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 SELENOOQ9BVL4 669 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 TCP11L1Q9NUJ3 509 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 NPHP3Q7Z494 1330 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 CYLC1P35663 651 aaPredicted RBP5.06□□□□□ -1.6
CHD9-201ENST00000219084 FKBP4Q02790 459 aaKnown RBP eCLIP5.06□□□□□ -1.6
CHD9-201ENST00000219084 FLIIQ13045 1269 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 IKQ13123 557 aaPredicted RBP5.06□□□□□ -1.6
CHD9-201ENST00000219084 STK3Q13188 491 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 C6orf163Q5TEZ5 329 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 PRPF40BQ6NWY9 871 aaKnown RBP5.06□□□□□ -1.6
CHD9-201ENST00000219084 CROCCP2Q86T23 111 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 LMBR1Q8WVP7 490 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 MYOM2P54296 1465 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 KIF20BQ96Q89 1820 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 RNF123Q5XPI4 1314 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 BICDL2A1A5D9 508 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 GOLGA8BA8MQT2 603 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 IFFO1Q0D2I5 559 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 ESCO1Q5FWF5 840 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 PPP4R3AQ6IN85 833 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 CCDC50Q8IVM0 306 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 OGFRQ9NZT2 677 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 ANKRD44Q8N8A2 993 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 FSIP1Q8NA03 581 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 EDC4Q6P2E9 1401 aaKnown RBP5.06□□□□□ -1.6
CHD9-201ENST00000219084 TARBP1Q13395 1621 aaKnown RBP5.06□□□□□ -1.6
CHD9-201ENST00000219084 RAD21O60216 631 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 GSTO1P78417 241 aa5.06□□□□□ -1.6
CHD9-201ENST00000219084 PDE4BQ07343 736 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms