RNA–Protein interactions for RNA: ENST00000217999.2

RHOXF1-201, Transcript of Rhox homeobox family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHOXF1, Length 769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1-201ENST00000217999 CHPF2Q9P2E5 772 aa18.61■□□□□ 0.57
RHOXF1-201ENST00000217999 DBF4Q9UBU7 674 aaPredicted RBP18.61■□□□□ 0.57
RHOXF1-201ENST00000217999 KRT24Q2M2I5 525 aa18.6■□□□□ 0.57
RHOXF1-201ENST00000217999 SUSD4Q5VX71 490 aa18.6■□□□□ 0.57
RHOXF1-201ENST00000217999 COPS6Q7L5N1 327 aa18.6■□□□□ 0.57
RHOXF1-201ENST00000217999 UTP14AQ9BVJ6 771 aaKnown RBP18.6■□□□□ 0.57
RHOXF1-201ENST00000217999 MBIPQ9NS73 344 aa18.6■□□□□ 0.57
RHOXF1-201ENST00000217999 PRELPP51888 382 aa18.59■□□□□ 0.57
RHOXF1-201ENST00000217999 FKBP4Q02790 459 aaKnown RBP eCLIP18.59■□□□□ 0.57
RHOXF1-201ENST00000217999 RBM17Q96I25 401 aaKnown RBP18.59■□□□□ 0.57
RHOXF1-201ENST00000217999 TMX4Q9H1E5 349 aaPredicted RBP18.59■□□□□ 0.57
RHOXF1-201ENST00000217999 RRAGCQ9HB90 399 aa18.59■□□□□ 0.57
RHOXF1-201ENST00000217999 HYPKQ9NX55 129 aa18.59■□□□□ 0.57
RHOXF1-201ENST00000217999 WDR90Q96KV7 1748 aa18.59■□□□□ 0.57
RHOXF1-201ENST00000217999 VEGFAP15692 232 aaPredicted RBP18.58■□□□□ 0.56
RHOXF1-201ENST00000217999 APLP1P51693 650 aa18.58■□□□□ 0.56
RHOXF1-201ENST00000217999 FSTL1Q12841 308 aa18.58■□□□□ 0.56
RHOXF1-201ENST00000217999 GRIPAP1Q4V328 841 aa18.58■□□□□ 0.56
RHOXF1-201ENST00000217999 DUSP27Q5VZP5 1158 aa18.58■□□□□ 0.56
RHOXF1-201ENST00000217999 CC2D2BQ6DHV5 1058 aa18.58■□□□□ 0.56
RHOXF1-201ENST00000217999 NLRP3Q96P20 1036 aa18.58■□□□□ 0.56
RHOXF1-201ENST00000217999 C7orf43Q8WVR3 580 aa18.57■□□□□ 0.56
RHOXF1-201ENST00000217999 MRS2Q9HD23 443 aa18.57■□□□□ 0.56
RHOXF1-201ENST00000217999 ZNF853P0CG23 659 aa18.56■□□□□ 0.56
RHOXF1-201ENST00000217999 HOXA10P31260 410 aaPredicted RBP18.56■□□□□ 0.56
RHOXF1-201ENST00000217999 SMC1BQ8NDV3 1235 aa18.56■□□□□ 0.56
RHOXF1-201ENST00000217999 PLBD2Q8NHP8 589 aa18.56■□□□□ 0.56
RHOXF1-201ENST00000217999 PPEF1O14829 653 aaPredicted RBP18.55■□□□□ 0.56
RHOXF1-201ENST00000217999 GOLGA2Q08379 1002 aa18.55■□□□□ 0.56
RHOXF1-201ENST00000217999 TCIRG1Q13488 830 aa18.55■□□□□ 0.56
RHOXF1-201ENST00000217999 CRAMP1Q96RY5 1269 aa18.55■□□□□ 0.56
RHOXF1-201ENST00000217999 TRMT112Q9UI30 125 aaKnown RBP18.55■□□□□ 0.56
RHOXF1-201ENST00000217999 SH3TC1Q8TE82 1336 aa18.54■□□□□ 0.56
RHOXF1-201ENST00000217999 NLRP10Q86W26 655 aa18.54■□□□□ 0.56
RHOXF1-201ENST00000217999 PSMD1Q99460 953 aa18.54■□□□□ 0.56
RHOXF1-201ENST00000217999 LAMB2P55268 1798 aa18.53■□□□□ 0.56
RHOXF1-201ENST00000217999 CCDC27Q2M243 656 aa18.53■□□□□ 0.56
RHOXF1-201ENST00000217999 ANKRD13DQ6ZTN6 518 aa18.53■□□□□ 0.56
RHOXF1-201ENST00000217999 ZNF277Q9NRM2 450 aaPredicted RBP18.53■□□□□ 0.56
RHOXF1-201ENST00000217999 IQCA1LA6NCM1 817 aa18.52■□□□□ 0.56
RHOXF1-201ENST00000217999 IARSP41252 1262 aaKnown RBP18.52■□□□□ 0.56
RHOXF1-201ENST00000217999 SLC10A5Q5PT55 438 aa18.52■□□□□ 0.56
RHOXF1-201ENST00000217999 CCDC30Q5VVM6 783 aa18.51■□□□□ 0.55
RHOXF1-201ENST00000217999 JDP2Q8WYK2 163 aa18.51■□□□□ 0.55
RHOXF1-201ENST00000217999 SNED1Q8TER0 1413 aa18.5■□□□□ 0.55
RHOXF1-201ENST00000217999 DDX58O95786 925 aaKnown RBP18.5■□□□□ 0.55
RHOXF1-201ENST00000217999 NCBP3Q53F19 620 aaKnown RBP18.5■□□□□ 0.55
RHOXF1-201ENST00000217999 OLFM4Q6UX06 510 aa18.5■□□□□ 0.55
RHOXF1-201ENST00000217999 DDX46Q7L014 1031 aaKnown RBP18.5■□□□□ 0.55
RHOXF1-201ENST00000217999 RIC3Q7Z5B4 369 aa18.5■□□□□ 0.55
RHOXF1-201ENST00000217999 SYNE4Q8N205 404 aa18.5■□□□□ 0.55
RHOXF1-201ENST00000217999 SCN4AP35499 1836 aa18.5■□□□□ 0.55
RHOXF1-201ENST00000217999 ABCC4O15439 1325 aa18.49■□□□□ 0.55
RHOXF1-201ENST00000217999 ELL2O00472 640 aaPredicted RBP18.49■□□□□ 0.55
RHOXF1-201ENST00000217999 HSP90B1P14625 803 aaKnown RBP18.49■□□□□ 0.55
RHOXF1-201ENST00000217999 CCDC184Q52MB2 194 aa18.49■□□□□ 0.55
RHOXF1-201ENST00000217999 CEP350Q5VT06 3117 aa18.49■□□□□ 0.55
RHOXF1-201ENST00000217999 DDX60Q8IY21 1712 aaKnown RBP18.49■□□□□ 0.55
RHOXF1-201ENST00000217999 IL16Q14005 1332 aa18.49■□□□□ 0.55
RHOXF1-201ENST00000217999 DDNO94850 711 aaPredicted RBP18.48■□□□□ 0.55
RHOXF1-201ENST00000217999 HCLS1P14317 486 aaPredicted RBP18.48■□□□□ 0.55
RHOXF1-201ENST00000217999 C3orf67Q6ZVT6 689 aa18.48■□□□□ 0.55
RHOXF1-201ENST00000217999 L3MBTL3Q96JM7 780 aaPredicted RBP18.48■□□□□ 0.55
RHOXF1-201ENST00000217999 STK31Q9BXU1 1019 aa18.48■□□□□ 0.55
RHOXF1-201ENST00000217999 TMC4Q7Z404 712 aa18.47■□□□□ 0.55
RHOXF1-201ENST00000217999 WWC1Q8IX03 1113 aa18.47■□□□□ 0.55
RHOXF1-201ENST00000217999 LARGE2Q8N3Y3 721 aa18.47■□□□□ 0.55
RHOXF1-201ENST00000217999 SUPT20HQ8NEM7 779 aa18.47■□□□□ 0.55
RHOXF1-201ENST00000217999 ISCA1Q9BUE6 129 aa18.47■□□□□ 0.55
RHOXF1-201ENST00000217999 ATP6V0A2Q9Y487 856 aa18.47■□□□□ 0.55
RHOXF1-201ENST00000217999 TCERG1O14776 1098 aaKnown RBP18.46■□□□□ 0.55
RHOXF1-201ENST00000217999 BBOX1O75936 387 aa18.46■□□□□ 0.55
RHOXF1-201ENST00000217999 EIF6P56537 245 aaKnown RBP18.46■□□□□ 0.55
RHOXF1-201ENST00000217999 TSR2Q969E8 191 aaKnown RBP18.46■□□□□ 0.55
RHOXF1-201ENST00000217999 ZNF541Q9H0D2 1346 aa18.46■□□□□ 0.55
RHOXF1-201ENST00000217999 ATP5J2-PTCD1G3V325 749 aa18.45■□□□□ 0.54
RHOXF1-201ENST00000217999 TRIM28Q13263 835 aaKnown RBP18.45■□□□□ 0.54
RHOXF1-201ENST00000217999 GRAPQ13588 217 aa18.45■□□□□ 0.54
RHOXF1-201ENST00000217999 NIM1KQ8IY84 436 aa18.45■□□□□ 0.54
RHOXF1-201ENST00000217999 C8orf58Q8NAV2 365 aa18.45■□□□□ 0.54
RHOXF1-201ENST00000217999 GRAPLQ8TC17 118 aaPredicted RBP18.45■□□□□ 0.54
RHOXF1-201ENST00000217999 VPS33BQ9H267 617 aa18.45■□□□□ 0.54
RHOXF1-201ENST00000217999 LRRC37AA6NMS7 1700 aa18.44■□□□□ 0.54
RHOXF1-201ENST00000217999 FZD9O00144 591 aa18.44■□□□□ 0.54
RHOXF1-201ENST00000217999 GPC2Q8N158 579 aa18.44■□□□□ 0.54
RHOXF1-201ENST00000217999 PHAXQ9H814 394 aaKnown RBP18.44■□□□□ 0.54
RHOXF1-201ENST00000217999 HACL1Q9UJ83 578 aa18.44■□□□□ 0.54
RHOXF1-201ENST00000217999 POTECB2RU33 542 aa18.43■□□□□ 0.54
RHOXF1-201ENST00000217999 PPIP5K2O43314 1243 aa18.43■□□□□ 0.54
RHOXF1-201ENST00000217999 TWISTNBQ3B726 338 aaPredicted RBP18.43■□□□□ 0.54
RHOXF1-201ENST00000217999 DPP8Q6V1X1 898 aaPredicted RBP18.43■□□□□ 0.54
RHOXF1-201ENST00000217999 SP8Q8IXZ3 490 aa18.43■□□□□ 0.54
RHOXF1-201ENST00000217999 FAM89AQ96GI7 184 aa18.43■□□□□ 0.54
RHOXF1-201ENST00000217999 IRS4O14654 1257 aaPredicted RBP18.42■□□□□ 0.54
RHOXF1-201ENST00000217999 LMOD1P29536 600 aaPredicted RBP18.42■□□□□ 0.54
RHOXF1-201ENST00000217999 CHADLQ6NUI6 762 aa18.42■□□□□ 0.54
RHOXF1-201ENST00000217999 LDHDQ86WU2 507 aa18.42■□□□□ 0.54
RHOXF1-201ENST00000217999 ZBTB38Q8NAP3 1195 aaPredicted RBP18.42■□□□□ 0.54
RHOXF1-201ENST00000217999 CCDC191Q8NCU4 936 aa18.42■□□□□ 0.54
RHOXF1-201ENST00000217999 MYD88Q99836 296 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms