RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 OSBPL3Q9H4L5 887 aa13.02□□□□□ -0.32
APOBEC3D-201ENST00000216099 COL5A2P05997 1499 aaPredicted RBP13.02□□□□□ -0.33
APOBEC3D-201ENST00000216099 UBTFL1P0CB47 393 aaPredicted RBP13.02□□□□□ -0.33
APOBEC3D-201ENST00000216099 CSB-PGBD3P0DP91 1061 aa13.02□□□□□ -0.33
APOBEC3D-201ENST00000216099 POLR3EQ9NVU0 708 aa13.02□□□□□ -0.33
APOBEC3D-201ENST00000216099 AFDNP55196 1824 aaKnown RBP13.02□□□□□ -0.33
APOBEC3D-201ENST00000216099 GSPT1P15170 499 aaKnown RBP13.01□□□□□ -0.33
APOBEC3D-201ENST00000216099 SLC4A3P48751 1232 aa13.01□□□□□ -0.33
APOBEC3D-201ENST00000216099 TBC1D9Q6ZT07 1266 aa13.01□□□□□ -0.33
APOBEC3D-201ENST00000216099 ADAMTS19Q8TE59 1207 aa13.01□□□□□ -0.33
APOBEC3D-201ENST00000216099 EVI5LQ96CN4 794 aa13.01□□□□□ -0.33
APOBEC3D-201ENST00000216099 SGSM3Q96HU1 749 aa13.01□□□□□ -0.33
APOBEC3D-201ENST00000216099 HYPKQ9NX55 129 aa13.01□□□□□ -0.33
APOBEC3D-201ENST00000216099 ARFGEF2Q9Y6D5 1785 aa13.01□□□□□ -0.33
APOBEC3D-201ENST00000216099 BEND3Q5T5X7 828 aa13.01□□□□□ -0.33
APOBEC3D-201ENST00000216099 DCAF5Q96JK2 942 aa13.01□□□□□ -0.33
APOBEC3D-201ENST00000216099 WDR17Q8IZU2 1322 aa13.01□□□□□ -0.33
APOBEC3D-201ENST00000216099 ALDH1L1O75891 902 aa13□□□□□ -0.33
APOBEC3D-201ENST00000216099 CHRNA2Q15822 529 aa13□□□□□ -0.33
APOBEC3D-201ENST00000216099 LRRFIP2Q9Y608 721 aaKnown RBP13□□□□□ -0.33
APOBEC3D-201ENST00000216099 COL22A1Q8NFW1 1626 aaPredicted RBP13□□□□□ -0.33
APOBEC3D-201ENST00000216099 EXOC8Q8IYI6 725 aa13□□□□□ -0.33
APOBEC3D-201ENST00000216099 SSH3Q8TE77 659 aa13□□□□□ -0.33
APOBEC3D-201ENST00000216099 SALL3Q9BXA9 1300 aa12.99□□□□□ -0.33
APOBEC3D-201ENST00000216099 WNK3Q9BYP7 1800 aa12.99□□□□□ -0.33
APOBEC3D-201ENST00000216099 ZNF790Q6PG37 636 aa12.99□□□□□ -0.33
APOBEC3D-201ENST00000216099 DNAJC14Q6Y2X3 702 aaPredicted RBP12.99□□□□□ -0.33
APOBEC3D-201ENST00000216099 DDX21Q9NR30 783 aaKnown RBP eCLIP12.99□□□□□ -0.33
APOBEC3D-201ENST00000216099 NAP1L2Q9ULW6 460 aaPredicted RBP12.99□□□□□ -0.33
APOBEC3D-201ENST00000216099 COL14A1Q05707 1796 aaKnown RBP12.99□□□□□ -0.33
APOBEC3D-201ENST00000216099 PLCH1Q4KWH8 1693 aa12.99□□□□□ -0.33
APOBEC3D-201ENST00000216099 PI4KAP2A4QPH2 592 aa12.99□□□□□ -0.33
APOBEC3D-201ENST00000216099 IRF6O14896 467 aa12.99□□□□□ -0.33
APOBEC3D-201ENST00000216099 C16orf71Q8IYS4 520 aaPredicted RBP12.99□□□□□ -0.33
APOBEC3D-201ENST00000216099 PI4KAP1Q8N8J0 262 aa12.99□□□□□ -0.33
APOBEC3D-201ENST00000216099 PNMA6EA0A0J9YXQ4 647 aa12.98□□□□□ -0.33
APOBEC3D-201ENST00000216099 KSR2Q6VAB6 950 aa12.98□□□□□ -0.33
APOBEC3D-201ENST00000216099 PBXIP1Q96AQ6 731 aa12.98□□□□□ -0.33
APOBEC3D-201ENST00000216099 TBC1D2Q9BYX2 928 aa12.98□□□□□ -0.33
APOBEC3D-201ENST00000216099 LRRCC1Q9C099 1032 aa12.98□□□□□ -0.33
APOBEC3D-201ENST00000216099 HDAC5Q9UQL6 1122 aa12.98□□□□□ -0.33
APOBEC3D-201ENST00000216099 AOX1Q06278 1338 aa12.98□□□□□ -0.33
APOBEC3D-201ENST00000216099 CYP27B1O15528 508 aa12.98□□□□□ -0.33
APOBEC3D-201ENST00000216099 AHDC1Q5TGY3 1603 aaPredicted RBP12.98□□□□□ -0.33
APOBEC3D-201ENST00000216099 NUP188Q5SRE5 1749 aa12.97□□□□□ -0.33
APOBEC3D-201ENST00000216099 CNPY4Q8N129 248 aa12.97□□□□□ -0.33
APOBEC3D-201ENST00000216099 GIPC2Q8TF65 315 aa12.97□□□□□ -0.33
APOBEC3D-201ENST00000216099 SGIP1Q9BQI5 828 aa12.97□□□□□ -0.33
APOBEC3D-201ENST00000216099 CDCA7Q9BWT1 371 aaPredicted RBP12.97□□□□□ -0.33
APOBEC3D-201ENST00000216099 PRDM11Q9NQV5 511 aa12.97□□□□□ -0.33
APOBEC3D-201ENST00000216099 DDX58O95786 925 aaKnown RBP12.97□□□□□ -0.33
APOBEC3D-201ENST00000216099 OTUD7AQ8TE49 926 aaPredicted RBP12.97□□□□□ -0.33
APOBEC3D-201ENST00000216099 SNX21Q969T3 373 aa12.97□□□□□ -0.33
APOBEC3D-201ENST00000216099 TOGARAM1Q9Y4F4 1720 aa12.97□□□□□ -0.33
APOBEC3D-201ENST00000216099 PCDH11XQ9BZA7 1347 aa12.96□□□□□ -0.33
APOBEC3D-201ENST00000216099 PCDH11YQ9BZA8 1340 aa12.96□□□□□ -0.33
APOBEC3D-201ENST00000216099 TBC1D12O60347 775 aa12.96□□□□□ -0.33
APOBEC3D-201ENST00000216099 MAP4K4O95819 1239 aaPredicted RBP12.96□□□□□ -0.33
APOBEC3D-201ENST00000216099 PDE1AP54750 535 aa12.96□□□□□ -0.33
APOBEC3D-201ENST00000216099 MTX1Q13505 466 aa12.96□□□□□ -0.33
APOBEC3D-201ENST00000216099 STAP2Q9UGK3 403 aa12.96□□□□□ -0.33
APOBEC3D-201ENST00000216099 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.96□□□□□ -0.33
APOBEC3D-201ENST00000216099 UTYO14607 1347 aa12.96□□□□□ -0.33
APOBEC3D-201ENST00000216099 PDIA6Q15084 440 aa12.96□□□□□ -0.34
APOBEC3D-201ENST00000216099 CARD10Q9BWT7 1032 aa12.96□□□□□ -0.34
APOBEC3D-201ENST00000216099 EXOC6BQ9Y2D4 811 aa12.96□□□□□ -0.34
APOBEC3D-201ENST00000216099 ROBO1Q9Y6N7 1651 aa12.95□□□□□ -0.34
APOBEC3D-201ENST00000216099 TPD52L2O43399 206 aaKnown RBP12.95□□□□□ -0.34
APOBEC3D-201ENST00000216099 SDSP20132 328 aa12.95□□□□□ -0.34
APOBEC3D-201ENST00000216099 PROSER3Q2NL68 480 aa12.95□□□□□ -0.34
APOBEC3D-201ENST00000216099 CASC1Q6TDU7 716 aa12.95□□□□□ -0.34
APOBEC3D-201ENST00000216099 NFATC2IPQ8NCF5 419 aa12.95□□□□□ -0.34
APOBEC3D-201ENST00000216099 DNAJC2Q99543 621 aaKnown RBP12.95□□□□□ -0.34
APOBEC3D-201ENST00000216099 MAP3K2Q9Y2U5 619 aa12.95□□□□□ -0.34
APOBEC3D-201ENST00000216099 LINS1Q8NG48 757 aa12.95□□□□□ -0.34
APOBEC3D-201ENST00000216099 ITGB4P16144 1822 aa12.94□□□□□ -0.34
APOBEC3D-201ENST00000216099 ANXA1P04083 346 aa12.94□□□□□ -0.34
APOBEC3D-201ENST00000216099 HSP90AB4PQ58FF6 505 aa12.94□□□□□ -0.34
APOBEC3D-201ENST00000216099 PPP1R42Q7Z4L9 355 aa12.94□□□□□ -0.34
APOBEC3D-201ENST00000216099 RASEFQ8IZ41 740 aa12.94□□□□□ -0.34
APOBEC3D-201ENST00000216099 ANTXR1Q9H6X2 564 aa12.94□□□□□ -0.34
APOBEC3D-201ENST00000216099 KCPQ6ZWJ8 1503 aa12.94□□□□□ -0.34
APOBEC3D-201ENST00000216099 PRAMEF22A3QJZ6 481 aa12.94□□□□□ -0.34
APOBEC3D-201ENST00000216099 SNRPA1P09661 255 aaKnown RBP12.94□□□□□ -0.34
APOBEC3D-201ENST00000216099 FMNL2Q96PY5 1086 aa12.94□□□□□ -0.34
APOBEC3D-201ENST00000216099 NBPF7P0C2Y1 421 aaPredicted RBP12.93□□□□□ -0.34
APOBEC3D-201ENST00000216099 MX1P20591 662 aa12.93□□□□□ -0.34
APOBEC3D-201ENST00000216099 DPH6Q7L8W6 267 aa12.93□□□□□ -0.34
APOBEC3D-201ENST00000216099 HSCBQ8IWL3 235 aa12.93□□□□□ -0.34
APOBEC3D-201ENST00000216099 TTC5Q8N0Z6 440 aa12.93□□□□□ -0.34
APOBEC3D-201ENST00000216099 ZCRB1Q8TBF4 217 aaKnown RBP12.93□□□□□ -0.34
APOBEC3D-201ENST00000216099 ERBB4Q15303 1308 aa12.93□□□□□ -0.34
APOBEC3D-201ENST00000216099 COL16A1Q07092 1604 aaPredicted RBP12.93□□□□□ -0.34
APOBEC3D-201ENST00000216099 TMEM88BA6NKF7 163 aa12.93□□□□□ -0.34
APOBEC3D-201ENST00000216099 ERVV-2B6SEH9 535 aa12.93□□□□□ -0.34
APOBEC3D-201ENST00000216099 CABP4P57796 275 aa12.93□□□□□ -0.34
APOBEC3D-201ENST00000216099 SLC39A6Q13433 755 aa12.93□□□□□ -0.34
APOBEC3D-201ENST00000216099 NFKBIBQ15653 356 aa12.93□□□□□ -0.34
APOBEC3D-201ENST00000216099 NAALADL2Q58DX5 795 aa12.93□□□□□ -0.34
APOBEC3D-201ENST00000216099 TOM1L2Q6ZVM7 507 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms