RNA–Protein interactions for RNA: ENST00000200652.3

SLC22A4-201, Transcript of solute carrier family 22 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A4, Length 2,201 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A4-201ENST00000200652 CASP7P55210 303 aa21.89■■□□□ 1.09
SLC22A4-201ENST00000200652 NOL8Q76FK4 1167 aaKnown RBP21.89■■□□□ 1.09
SLC22A4-201ENST00000200652 PTPN12Q05209 780 aaKnown RBP21.88■■□□□ 1.09
SLC22A4-201ENST00000200652 RASEFQ8IZ41 740 aa21.88■■□□□ 1.09
SLC22A4-201ENST00000200652 INTS4Q96HW7 963 aaKnown RBP21.88■■□□□ 1.09
SLC22A4-201ENST00000200652 A1BGP04217 495 aa21.87■■□□□ 1.09
SLC22A4-201ENST00000200652 TTLL7Q6ZT98 887 aa21.87■■□□□ 1.09
SLC22A4-201ENST00000200652 NUP188Q5SRE5 1749 aa21.87■■□□□ 1.09
SLC22A4-201ENST00000200652 MCTP1Q6DN14 999 aa21.87■■□□□ 1.09
SLC22A4-201ENST00000200652 XRCC6P12956 609 aaKnown RBP eCLIP21.86■■□□□ 1.097e-7■■■□□ 14.7
SLC22A4-201ENST00000200652 PTH1RQ03431 593 aa21.86■■□□□ 1.09
SLC22A4-201ENST00000200652 ARXQ96QS3 562 aa21.86■■□□□ 1.09
SLC22A4-201ENST00000200652 BOLA2Q9H3K6 86 aa21.86■■□□□ 1.09
SLC22A4-201ENST00000200652 TNS2Q63HR2 1409 aa21.85■■□□□ 1.09
SLC22A4-201ENST00000200652 H7C1W4 665 aa21.85■■□□□ 1.09
SLC22A4-201ENST00000200652 HIP1O00291 1037 aa21.84■■□□□ 1.09
SLC22A4-201ENST00000200652 TTC14Q96N46 770 aa21.84■■□□□ 1.09
SLC22A4-201ENST00000200652 TOGARAM1Q9Y4F4 1720 aa21.84■■□□□ 1.09
SLC22A4-201ENST00000200652 TFCP2Q12800 502 aa21.83■■□□□ 1.09
SLC22A4-201ENST00000200652 KLHL40Q2TBA0 621 aa21.83■■□□□ 1.09
SLC22A4-201ENST00000200652 LMBRD1Q9NUN5 540 aa21.83■■□□□ 1.09
SLC22A4-201ENST00000200652 FOXO4P98177 505 aa21.83■■□□□ 1.08
SLC22A4-201ENST00000200652 NMIQ13287 307 aaPredicted RBP21.83■■□□□ 1.08
SLC22A4-201ENST00000200652 TNNI3KQ59H18 835 aa21.83■■□□□ 1.08
SLC22A4-201ENST00000200652 FAM227BQ96M60 508 aa21.83■■□□□ 1.08
SLC22A4-201ENST00000200652 DDX49Q9Y6V7 483 aaKnown RBP21.83■■□□□ 1.08
SLC22A4-201ENST00000200652 FPGT-TNNI3KV9GXZ4 949 aa21.83■■□□□ 1.08
SLC22A4-201ENST00000200652 LMBR1LQ6UX01 489 aa21.82■■□□□ 1.08
SLC22A4-201ENST00000200652 KCNB2Q92953 911 aa21.82■■□□□ 1.08
SLC22A4-201ENST00000200652 CWC25Q9NXE8 425 aaPredicted RBP21.82■■□□□ 1.08
SLC22A4-201ENST00000200652 TJP1Q07157 1748 aa21.82■■□□□ 1.08
SLC22A4-201ENST00000200652 DBNLQ9UJU6 430 aaKnown RBP21.82■■□□□ 1.08
SLC22A4-201ENST00000200652 ISY1Q9ULR0 285 aaKnown RBP21.82■■□□□ 1.08
SLC22A4-201ENST00000200652 CCDC171Q6TFL3 1326 aa21.81■■□□□ 1.08
SLC22A4-201ENST00000200652 BRD1O95696 1058 aa21.81■■□□□ 1.08
SLC22A4-201ENST00000200652 SNRKQ9NRH2 765 aa21.81■■□□□ 1.08
SLC22A4-201ENST00000200652 MRE11P49959 708 aa21.8■■□□□ 1.08
SLC22A4-201ENST00000200652 NECTIN1Q15223 517 aa21.8■■□□□ 1.08
SLC22A4-201ENST00000200652 PRPF40BQ6NWY9 871 aaKnown RBP21.8■■□□□ 1.08
SLC22A4-201ENST00000200652 FSD1Q9BTV5 496 aa21.8■■□□□ 1.08
SLC22A4-201ENST00000200652 ZBTB3Q9H5J0 574 aa21.8■■□□□ 1.08
SLC22A4-201ENST00000200652 ATP5JP18859 108 aa21.8■■□□□ 1.08
SLC22A4-201ENST00000200652 AK2P54819 239 aa21.8■■□□□ 1.08
SLC22A4-201ENST00000200652 TMOD3Q9NYL9 352 aa21.8■■□□□ 1.08
SLC22A4-201ENST00000200652 A0A0D9SFI3 127 aa21.79■■□□□ 1.08
SLC22A4-201ENST00000200652 CASTP20810 708 aaKnown RBP21.79■■□□□ 1.08
SLC22A4-201ENST00000200652 FOXD4L5Q5VV16 416 aaPredicted RBP21.79■■□□□ 1.08
SLC22A4-201ENST00000200652 FOXD4L4Q8WXT5 416 aaPredicted RBP21.79■■□□□ 1.08
SLC22A4-201ENST00000200652 MAP4K1Q92918 833 aa21.79■■□□□ 1.08
SLC22A4-201ENST00000200652 RUFY3Q7L099 469 aa21.78■■□□□ 1.08
SLC22A4-201ENST00000200652 GAS2L3Q86XJ1 694 aa21.78■■□□□ 1.08
SLC22A4-201ENST00000200652 CCDC191Q8NCU4 936 aa21.78■■□□□ 1.08
SLC22A4-201ENST00000200652 GRPEL1Q9HAV7 217 aa21.78■■□□□ 1.08
SLC22A4-201ENST00000200652 BTG4Q9NY30 223 aa21.78■■□□□ 1.08
SLC22A4-201ENST00000200652 CPA1P15085 419 aa21.78■■□□□ 1.08
SLC22A4-201ENST00000200652 ADCK5Q3MIX3 580 aa21.78■■□□□ 1.08
SLC22A4-201ENST00000200652 TM6SF1Q9BZW5 370 aa21.78■■□□□ 1.08
SLC22A4-201ENST00000200652 LIMCH1Q9UPQ0 1083 aa21.78■■□□□ 1.08
SLC22A4-201ENST00000200652 RBM8AQ9Y5S9 174 aaKnown RBP21.78■■□□□ 1.08
SLC22A4-201ENST00000200652 PRPF40AO75400 957 aaKnown RBP21.77■■□□□ 1.08
SLC22A4-201ENST00000200652 EDC3Q96F86 508 aaKnown RBP21.77■■□□□ 1.08
SLC22A4-201ENST00000200652 CHAMP1Q96JM3 812 aa21.77■■□□□ 1.08
SLC22A4-201ENST00000200652 PANK2Q9BZ23 570 aa21.77■■□□□ 1.08
SLC22A4-201ENST00000200652 CHMP3Q9Y3E7 222 aa21.77■■□□□ 1.08
SLC22A4-201ENST00000200652 JAKMIP1Q96N16 626 aaKnown RBP21.76■■□□□ 1.07
SLC22A4-201ENST00000200652 DBNDD2Q9BQY9 259 aa21.76■■□□□ 1.07
SLC22A4-201ENST00000200652 ZSWIM6Q9HCJ5 1215 aa21.76■■□□□ 1.07
SLC22A4-201ENST00000200652 CREB3L3Q68CJ9 461 aa21.76■■□□□ 1.07
SLC22A4-201ENST00000200652 MED23Q9ULK4 1368 aa21.75■■□□□ 1.07
SLC22A4-201ENST00000200652 PIGBQ92521 554 aa21.75■■□□□ 1.07
SLC22A4-201ENST00000200652 LARP6Q9BRS8 491 aaKnown RBP21.75■■□□□ 1.07
SLC22A4-201ENST00000200652 RTN4Q9NQC3 1192 aaKnown RBP21.75■■□□□ 1.07
SLC22A4-201ENST00000200652 VPS53Q5VIR6 699 aa21.75■■□□□ 1.07
SLC22A4-201ENST00000200652 ATG9AQ7Z3C6 839 aa21.75■■□□□ 1.07
SLC22A4-201ENST00000200652 ASAP1Q9ULH1 1129 aa21.75■■□□□ 1.07
SLC22A4-201ENST00000200652 ZKSCAN1P17029 563 aaPredicted RBP21.74■■□□□ 1.07
SLC22A4-201ENST00000200652 KCNJ4P48050 445 aa21.74■■□□□ 1.07
SLC22A4-201ENST00000200652 PDRG1Q9NUG6 133 aa21.74■■□□□ 1.07
SLC22A4-201ENST00000200652 CYP46A1Q9Y6A2 500 aa21.74■■□□□ 1.07
SLC22A4-201ENST00000200652 ISCA1Q9BUE6 129 aa21.74■■□□□ 1.07
SLC22A4-201ENST00000200652 ITGB4P16144 1822 aa21.73■■□□□ 1.07
SLC22A4-201ENST00000200652 SLC27A2O14975 620 aa21.72■■□□□ 1.07
SLC22A4-201ENST00000200652 NCLP19338 710 aaKnown RBP21.72■■□□□ 1.07
SLC22A4-201ENST00000200652 ZNF589Q86UQ0 364 aaPredicted RBP21.72■■□□□ 1.07
SLC22A4-201ENST00000200652 DNAJC10Q8IXB1 793 aa21.72■■□□□ 1.07
SLC22A4-201ENST00000200652 VSIG10Q8N0Z9 540 aa21.72■■□□□ 1.07
SLC22A4-201ENST00000200652 TEX13AQ9BXU3 409 aaPredicted RBP21.72■■□□□ 1.07
SLC22A4-201ENST00000200652 NDUFB9Q9Y6M9 179 aa21.72■■□□□ 1.07
SLC22A4-201ENST00000200652 JCADQ9P266 1359 aa21.72■■□□□ 1.07
SLC22A4-201ENST00000200652 TCIRG1Q13488 830 aa21.72■■□□□ 1.07
SLC22A4-201ENST00000200652 GPT2Q8TD30 523 aa21.72■■□□□ 1.07
SLC22A4-201ENST00000200652 HAUS7Q99871 368 aa21.72■■□□□ 1.07
SLC22A4-201ENST00000200652 ATG3Q9NT62 314 aa21.72■■□□□ 1.07
SLC22A4-201ENST00000200652 COL14A1Q05707 1796 aaKnown RBP21.71■■□□□ 1.07
SLC22A4-201ENST00000200652 LARGE1O95461 756 aa21.71■■□□□ 1.07
SLC22A4-201ENST00000200652 DISP2A7MBM2 1401 aa21.71■■□□□ 1.07
SLC22A4-201ENST00000200652 IL15P40933 162 aaPredicted RBP21.71■■□□□ 1.07
SLC22A4-201ENST00000200652 CAVIN1Q6NZI2 390 aaKnown RBP21.71■■□□□ 1.07
SLC22A4-201ENST00000200652 DNAJC2Q99543 621 aaKnown RBP21.71■■□□□ 1.07
SLC22A4-201ENST00000200652 GPR108Q9NPR9 543 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms